RNA–Protein interactions for RNA: ENST00000559242.5

USP8-207, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-207ENST00000559242 DEPDC4Q8N2C3 294 aa9.01□□□□□ -0.97
USP8-207ENST00000559242 TSEN34Q9BSV6 310 aaKnown RBP9.01□□□□□ -0.97
USP8-207ENST00000559242 SPINT1O43278 529 aa9□□□□□ -0.97
USP8-207ENST00000559242 PTGIRP43119 386 aa9□□□□□ -0.97
USP8-207ENST00000559242 CTSOP43234 321 aaPredicted RBP9□□□□□ -0.97
USP8-207ENST00000559242 CALR3Q96L12 384 aaKnown RBP9□□□□□ -0.97
USP8-207ENST00000559242 INSM2Q96T92 566 aaPredicted RBP9□□□□□ -0.97
USP8-207ENST00000559242 ARID3CA6NKF2 412 aa8.99□□□□□ -0.97
USP8-207ENST00000559242 SCARF1Q14162 830 aa8.99□□□□□ -0.97
USP8-207ENST00000559242 C14orf37Q86TY3 774 aa8.99□□□□□ -0.97
USP8-207ENST00000559242 CCDC125Q86Z20 511 aa8.99□□□□□ -0.97
USP8-207ENST00000559242 SOS2Q07890 1332 aaPredicted RBP8.99□□□□□ -0.97
USP8-207ENST00000559242 ATP5J2-PTCD1G3V325 749 aa8.98□□□□□ -0.97
USP8-207ENST00000559242 NCOA4Q13772 614 aa8.98□□□□□ -0.97
USP8-207ENST00000559242 RAB6BQ9NRW1 208 aa8.98□□□□□ -0.97
USP8-207ENST00000559242 TFIP11Q9UBB9 837 aaKnown RBP8.98□□□□□ -0.97
USP8-207ENST00000559242 MAP7D1Q3KQU3 841 aa8.97□□□□□ -0.97
USP8-207ENST00000559242 SENP2Q9HC62 589 aa8.97□□□□□ -0.97
USP8-207ENST00000559242 DNMT3LQ9UJW3 386 aa8.97□□□□□ -0.97
USP8-207ENST00000559242 TIMELESSQ9UNS1 1208 aa8.97□□□□□ -0.97
USP8-207ENST00000559242 A0A1W2PRU2 124 aa8.96□□□□□ -0.98
USP8-207ENST00000559242 FIGNL2A6NMB9 653 aa8.96□□□□□ -0.98
USP8-207ENST00000559242 USP17L5A8MUK1 530 aa8.96□□□□□ -0.98
USP8-207ENST00000559242 UPP2O95045 317 aa8.96□□□□□ -0.98
USP8-207ENST00000559242 USP4Q13107 963 aa8.96□□□□□ -0.98
USP8-207ENST00000559242 FOXD4L5Q5VV16 416 aaPredicted RBP8.96□□□□□ -0.98
USP8-207ENST00000559242 NFATC2IPQ8NCF5 419 aa8.96□□□□□ -0.98
USP8-207ENST00000559242 ARHGEF10LQ9HCE6 1279 aa8.96□□□□□ -0.98
USP8-207ENST00000559242 PALM3A6NDB9 673 aaPredicted RBP8.95□□□□□ -0.98
USP8-207ENST00000559242 ATP9BO43861 1147 aa8.95□□□□□ -0.98
USP8-207ENST00000559242 KIFC2Q96AC6 838 aa8.95□□□□□ -0.98
USP8-207ENST00000559242 PPP1R12CQ9BZL4 782 aa8.95□□□□□ -0.98
USP8-207ENST00000559242 C1orf115Q9H7X2 142 aa8.95□□□□□ -0.98
USP8-207ENST00000559242 PCDHGA11Q9Y5H2 935 aa8.95□□□□□ -0.98
USP8-207ENST00000559242 USP17L3A6NCW0 530 aa8.94□□□□□ -0.98
USP8-207ENST00000559242 USP17L4A6NCW7 530 aa8.94□□□□□ -0.98
USP8-207ENST00000559242 IL2RAP01589 272 aa8.94□□□□□ -0.98
USP8-207ENST00000559242 USP17L2Q6R6M4 530 aa8.94□□□□□ -0.98
USP8-207ENST00000559242 USP17L1Q7RTZ2 530 aa8.94□□□□□ -0.98
USP8-207ENST00000559242 TTLL8A6PVC2 850 aa8.93□□□□□ -0.98
USP8-207ENST00000559242 MYCP01106 439 aaPredicted RBP8.93□□□□□ -0.98
USP8-207ENST00000559242 SCNN1DP51172 638 aa8.93□□□□□ -0.98
USP8-207ENST00000559242 CYP2U1Q7Z449 544 aa8.93□□□□□ -0.98
USP8-207ENST00000559242 RNF217Q8TC41 542 aa8.93□□□□□ -0.98
USP8-207ENST00000559242 ZNF775Q96BV0 537 aaPredicted RBP8.93□□□□□ -0.98
USP8-207ENST00000559242 ETNK1Q9HBU6 452 aa8.93□□□□□ -0.98
USP8-207ENST00000559242 POLMQ9NP87 494 aaPredicted RBP8.93□□□□□ -0.98
USP8-207ENST00000559242 HRH3Q9Y5N1 445 aa8.93□□□□□ -0.98
USP8-207ENST00000559242 MAFBQ9Y5Q3 323 aaPredicted RBP8.93□□□□□ -0.98
USP8-207ENST00000559242 MEN1O00255 615 aa8.92□□□□□ -0.98
USP8-207ENST00000559242 EML3Q32P44 896 aa8.92□□□□□ -0.98
USP8-207ENST00000559242 CFAP70Q5T0N1 1121 aa8.92□□□□□ -0.98
USP8-207ENST00000559242 KIAA1024Q9UPX6 916 aa8.92□□□□□ -0.98
USP8-207ENST00000559242 TMEM229AB2RXF0 380 aa8.91□□□□□ -0.98
USP8-207ENST00000559242 ZBTB7BO15156 539 aaPredicted RBP8.91□□□□□ -0.98
USP8-207ENST00000559242 CLDN10P78369 228 aa8.91□□□□□ -0.98
USP8-207ENST00000559242 CLN3Q13286 438 aa8.91□□□□□ -0.98
USP8-207ENST00000559242 PLEKHM2Q8IWE5 1019 aa8.91□□□□□ -0.98
USP8-207ENST00000559242 MAN1A2O60476 641 aa8.9□□□□□ -0.98
USP8-207ENST00000559242 GNRH1P01148 92 aa8.9□□□□□ -0.98
USP8-207ENST00000559242 CNKSR1Q969H4 720 aa8.9□□□□□ -0.98
USP8-207ENST00000559242 MKRN1Q9UHC7 482 aaKnown RBP8.9□□□□□ -0.98
USP8-207ENST00000559242 LMOD1P29536 600 aaPredicted RBP8.89□□□□□ -0.99
USP8-207ENST00000559242 RNF144AP50876 292 aaPredicted RBP8.89□□□□□ -0.99
USP8-207ENST00000559242 GTF2IP78347 998 aa8.89□□□□□ -0.99
USP8-207ENST00000559242 KANK4Q5T7N3 995 aaPredicted RBP8.89□□□□□ -0.99
USP8-207ENST00000559242 LCE2CQ5TA81 110 aa8.89□□□□□ -0.99
USP8-207ENST00000559242 XAGE2Q96GT9 111 aa8.89□□□□□ -0.99
USP8-207ENST00000559242 ESYT1Q9BSJ8 1104 aa8.89□□□□□ -0.99
USP8-207ENST00000559242 ESF1Q9H501 851 aaKnown RBP8.89□□□□□ -0.99
USP8-207ENST00000559242 NOD1Q9Y239 953 aa8.89□□□□□ -0.99
USP8-207ENST00000559242 LZTS3O60299 673 aaPredicted RBP8.88□□□□□ -0.99
USP8-207ENST00000559242 DKK1O94907 266 aa8.88□□□□□ -0.99
USP8-207ENST00000559242 VEGFBP49765 207 aa8.88□□□□□ -0.99
USP8-207ENST00000559242 GDF10P55107 478 aa8.88□□□□□ -0.99
USP8-207ENST00000559242 PRICKLE2Q7Z3G6 844 aa8.88□□□□□ -0.99
USP8-207ENST00000559242 SIRT1Q96EB6 747 aa8.88□□□□□ -0.99
USP8-207ENST00000559242 FHDC1Q9C0D6 1143 aaPredicted RBP8.88□□□□□ -0.99
USP8-207ENST00000559242 GRIP2Q9C0E4 1043 aa8.88□□□□□ -0.99
USP8-207ENST00000559242 RFX1P22670 979 aa8.87□□□□□ -0.99
USP8-207ENST00000559242 CENPCQ03188 943 aa8.87□□□□□ -0.99
USP8-207ENST00000559242 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.87□□□□□ -0.99
USP8-207ENST00000559242 SENP3-EIF4A1A0A087X0R7 540 aa8.86□□□□□ -0.99
USP8-207ENST00000559242 INHAP05111 366 aa8.86□□□□□ -0.99
USP8-207ENST00000559242 RHOQP17081 205 aa8.86□□□□□ -0.99
USP8-207ENST00000559242 PTSQ03393 145 aa8.86□□□□□ -0.99
USP8-207ENST00000559242 CDCA8Q53HL2 280 aa8.86□□□□□ -0.99
USP8-207ENST00000559242 OGFOD1Q8N543 542 aa8.86□□□□□ -0.99
USP8-207ENST00000559242 TRIM52Q96A61 297 aa8.86□□□□□ -0.99
USP8-207ENST00000559242 SERTAD1Q9UHV2 236 aa8.86□□□□□ -0.99
USP8-207ENST00000559242 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.85□□□□□ -0.997e-6■■□□□ 14.4
USP8-207ENST00000559242 NLRP3Q96P20 1036 aa8.85□□□□□ -0.99
USP8-207ENST00000559242 USP3Q9Y6I4 520 aa8.85□□□□□ -0.99
USP8-207ENST00000559242 SUPT5HO00267 1087 aaKnown RBP8.84□□□□□ -0.99
USP8-207ENST00000559242 GPC1P35052 558 aa8.84□□□□□ -0.99
USP8-207ENST00000559242 SRPK2P78362 688 aaKnown RBP8.84□□□□□ -0.99
USP8-207ENST00000559242 POU4F2Q12837 409 aa8.84□□□□□ -0.99
USP8-207ENST00000559242 NFX1Q12986 1120 aaKnown RBP8.84□□□□□ -0.99
USP8-207ENST00000559242 CRTC2Q53ET0 693 aaPredicted RBP8.84□□□□□ -0.99
USP8-207ENST00000559242 LYSMD3Q7Z3D4 306 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms