RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 DCTPP1Q9H773 170 aa19.56■□□□□ 0.72
HMBOX1-212ENST00000558662 NSFL1CQ9UNZ2 370 aaKnown RBP19.56■□□□□ 0.72
HMBOX1-212ENST00000558662 WDR33Q9C0J8 1336 aaKnown RBP19.55■□□□□ 0.72
HMBOX1-212ENST00000558662 ANKRD26Q9UPS8 1709 aa19.55■□□□□ 0.72
HMBOX1-212ENST00000558662 MX1P20591 662 aa19.55■□□□□ 0.72
HMBOX1-212ENST00000558662 U2AF2P26368 475 aaKnown RBP eCLIP19.55■□□□□ 0.723e-6■■■■□ 21.7
HMBOX1-212ENST00000558662 COL3A1P02461 1466 aaPredicted RBP19.55■□□□□ 0.72
HMBOX1-212ENST00000558662 SLFN14P0C7P3 912 aa19.55■□□□□ 0.72
HMBOX1-212ENST00000558662 CDC42BPGQ6DT37 1551 aa19.54■□□□□ 0.72
HMBOX1-212ENST00000558662 SPDYE4A6NLX3 237 aa19.54■□□□□ 0.72
HMBOX1-212ENST00000558662 ERC2O15083 957 aa19.54■□□□□ 0.72
HMBOX1-212ENST00000558662 ABCA9Q8IUA7 1624 aa19.53■□□□□ 0.72
HMBOX1-212ENST00000558662 BCL11BQ9C0K0 894 aaPredicted RBP19.53■□□□□ 0.72
HMBOX1-212ENST00000558662 TTC12Q9H892 705 aaPredicted RBP19.53■□□□□ 0.72
HMBOX1-212ENST00000558662 MCCP23508 829 aa19.52■□□□□ 0.72
HMBOX1-212ENST00000558662 KRT222Q8N1A0 295 aa19.52■□□□□ 0.72
HMBOX1-212ENST00000558662 TSC1Q92574 1164 aa19.52■□□□□ 0.72
HMBOX1-212ENST00000558662 API5Q9BZZ5 524 aaKnown RBP19.52■□□□□ 0.72
HMBOX1-212ENST00000558662 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.52■□□□□ 0.722e-6■■□□□ 13.7
HMBOX1-212ENST00000558662 TMX3Q96JJ7 454 aa19.52■□□□□ 0.71
HMBOX1-212ENST00000558662 SSH2Q76I76 1423 aa19.51■□□□□ 0.71
HMBOX1-212ENST00000558662 NCBP1Q09161 790 aaKnown RBP19.51■□□□□ 0.71
HMBOX1-212ENST00000558662 TERF2Q15554 542 aa19.51■□□□□ 0.71
HMBOX1-212ENST00000558662 RTL1A6NKG5 1358 aa19.5■□□□□ 0.71
HMBOX1-212ENST00000558662 UBE2HP62256 183 aa19.49■□□□□ 0.71
HMBOX1-212ENST00000558662 SIRT2Q8IXJ6 389 aa19.49■□□□□ 0.71
HMBOX1-212ENST00000558662 MRPL50Q8N5N7 158 aaKnown RBP19.49■□□□□ 0.71
HMBOX1-212ENST00000558662 TULP2O00295 520 aa19.49■□□□□ 0.71
HMBOX1-212ENST00000558662 RNF20Q5VTR2 975 aa19.49■□□□□ 0.71
HMBOX1-212ENST00000558662 ATP6V1DQ9Y5K8 247 aa19.49■□□□□ 0.71
HMBOX1-212ENST00000558662 FANCAO15360 1455 aa19.48■□□□□ 0.71
HMBOX1-212ENST00000558662 IRX5P78411 483 aaPredicted RBP19.48■□□□□ 0.71
HMBOX1-212ENST00000558662 SLFNL1Q499Z3 407 aa19.48■□□□□ 0.71
HMBOX1-212ENST00000558662 RPAP2Q8IXW5 612 aaPredicted RBP19.48■□□□□ 0.71
HMBOX1-212ENST00000558662 FAM135BQ49AJ0 1406 aa19.47■□□□□ 0.71
HMBOX1-212ENST00000558662 CFAP70Q5T0N1 1121 aa19.47■□□□□ 0.71
HMBOX1-212ENST00000558662 FAM53CQ9NYF3 392 aa19.47■□□□□ 0.71
HMBOX1-212ENST00000558662 RGS12O14924 1447 aa19.47■□□□□ 0.71
HMBOX1-212ENST00000558662 ZNF397Q8NF99 534 aaPredicted RBP19.47■□□□□ 0.71
HMBOX1-212ENST00000558662 KIF18AQ8NI77 898 aa19.47■□□□□ 0.71
HMBOX1-212ENST00000558662 JARID2Q92833 1246 aaPredicted RBP19.47■□□□□ 0.71
HMBOX1-212ENST00000558662 ZNF830Q96NB3 372 aaPredicted RBP19.47■□□□□ 0.71
HMBOX1-212ENST00000558662 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.46■□□□□ 0.71
HMBOX1-212ENST00000558662 USP48Q86UV5 1035 aa19.46■□□□□ 0.71
HMBOX1-212ENST00000558662 OSBPL3Q9H4L5 887 aa19.46■□□□□ 0.71
HMBOX1-212ENST00000558662 ABCC1P33527 1531 aa19.46■□□□□ 0.71
HMBOX1-212ENST00000558662 KCNJ4P48050 445 aa19.45■□□□□ 0.7
HMBOX1-212ENST00000558662 FUCA2Q9BTY2 467 aa19.45■□□□□ 0.7
HMBOX1-212ENST00000558662 SDSP20132 328 aa19.44■□□□□ 0.7
HMBOX1-212ENST00000558662 RPAP1Q9BWH6 1393 aaPredicted RBP19.44■□□□□ 0.7
HMBOX1-212ENST00000558662 NEK4P51957 841 aa19.44■□□□□ 0.7
HMBOX1-212ENST00000558662 HAP1P54257 671 aaPredicted RBP19.44■□□□□ 0.7
HMBOX1-212ENST00000558662 ANKRD44Q8N8A2 993 aa19.44■□□□□ 0.7
HMBOX1-212ENST00000558662 KCNF1Q9H3M0 494 aa19.44■□□□□ 0.7
HMBOX1-212ENST00000558662 CCDC112Q8NEF3 446 aa19.43■□□□□ 0.7
HMBOX1-212ENST00000558662 SLC12A5Q9H2X9 1139 aa19.43■□□□□ 0.7
HMBOX1-212ENST00000558662 ZFYVE9O95405 1425 aa19.43■□□□□ 0.7
HMBOX1-212ENST00000558662 KNDC1Q76NI1 1749 aa19.43■□□□□ 0.7
HMBOX1-212ENST00000558662 VAMP4O75379 141 aa19.42■□□□□ 0.7
HMBOX1-212ENST00000558662 FCHSD2O94868 740 aa19.42■□□□□ 0.7
HMBOX1-212ENST00000558662 HCLS1P14317 486 aaPredicted RBP19.42■□□□□ 0.7
HMBOX1-212ENST00000558662 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.42■□□□□ 0.7
HMBOX1-212ENST00000558662 PNPLA6Q8IY17 1366 aa19.42■□□□□ 0.7
HMBOX1-212ENST00000558662 PYCARDQ9ULZ3 195 aa19.42■□□□□ 0.7
HMBOX1-212ENST00000558662 ARAP3Q8WWN8 1544 aa19.41■□□□□ 0.7
HMBOX1-212ENST00000558662 EVC2Q86UK5 1308 aa19.41■□□□□ 0.7
HMBOX1-212ENST00000558662 CCDC192P0DO97 292 aa19.41■□□□□ 0.7
HMBOX1-212ENST00000558662 GNAI1P63096 354 aa19.41■□□□□ 0.7
HMBOX1-212ENST00000558662 IFT57Q9NWB7 429 aa19.41■□□□□ 0.7
HMBOX1-212ENST00000558662 TCHHQ07283 1943 aa19.41■□□□□ 0.7
HMBOX1-212ENST00000558662 ADGRB1O14514 1584 aa19.4■□□□□ 0.7
HMBOX1-212ENST00000558662 PLCH2O75038 1416 aa19.4■□□□□ 0.7
HMBOX1-212ENST00000558662 NEMFO60524 1076 aa19.4■□□□□ 0.7
HMBOX1-212ENST00000558662 C17orf53Q8N3J3 647 aaPredicted RBP19.39■□□□□ 0.7
HMBOX1-212ENST00000558662 FRMPD1Q5SYB0 1578 aa19.39■□□□□ 0.7
HMBOX1-212ENST00000558662 ADGRB3O60242 1522 aa19.39■□□□□ 0.69
HMBOX1-212ENST00000558662 CCDC171Q6TFL3 1326 aa19.39■□□□□ 0.69
HMBOX1-212ENST00000558662 ADGRF5Q8IZF2 1346 aa19.39■□□□□ 0.69
HMBOX1-212ENST00000558662 TUBGCP6Q96RT7 1819 aa19.39■□□□□ 0.69
HMBOX1-212ENST00000558662 PPLO60437 1756 aa19.39■□□□□ 0.69
HMBOX1-212ENST00000558662 GADD45BO75293 160 aaPredicted RBP19.38■□□□□ 0.69
HMBOX1-212ENST00000558662 ZFYVE16Q7Z3T8 1539 aa19.37■□□□□ 0.69
HMBOX1-212ENST00000558662 FAM177BA6PVY3 158 aa19.37■□□□□ 0.69
HMBOX1-212ENST00000558662 KIF2AO00139 706 aaPredicted RBP19.37■□□□□ 0.69
HMBOX1-212ENST00000558662 U2SURPO15042 1029 aaKnown RBP19.37■□□□□ 0.69
HMBOX1-212ENST00000558662 FAM200AQ8TCP9 573 aa19.37■□□□□ 0.69
HMBOX1-212ENST00000558662 RIMBP3CA6NJZ7 1639 aa19.37■□□□□ 0.69
HMBOX1-212ENST00000558662 RIMBP3BA6NNM3 1639 aa19.37■□□□□ 0.69
HMBOX1-212ENST00000558662 RIMBP3Q9UFD9 1639 aa19.37■□□□□ 0.69
HMBOX1-212ENST00000558662 CAVIN2O95810 425 aa19.37■□□□□ 0.69
HMBOX1-212ENST00000558662 TNNT1P13805 278 aa19.37■□□□□ 0.69
HMBOX1-212ENST00000558662 EFCC1Q9HA90 598 aa19.37■□□□□ 0.69
HMBOX1-212ENST00000558662 ATP10DQ9P241 1426 aa19.36■□□□□ 0.69
HMBOX1-212ENST00000558662 GLI2P10070 1586 aa19.36■□□□□ 0.69
HMBOX1-212ENST00000558662 MROH2AA6NES4 1674 aa19.36■□□□□ 0.69
HMBOX1-212ENST00000558662 ERO1AQ96HE7 468 aa19.36■□□□□ 0.69
HMBOX1-212ENST00000558662 C1orf115Q9H7X2 142 aa19.36■□□□□ 0.69
HMBOX1-212ENST00000558662 DIAPH1O60610 1272 aaKnown RBP19.35■□□□□ 0.69
HMBOX1-212ENST00000558662 HMMRO75330 724 aa19.35■□□□□ 0.69
HMBOX1-212ENST00000558662 ZSCAN22P10073 491 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms