RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 PPP2R1AP30153 589 aa16.67■□□□□ 0.26
SMAD3-205ENST00000558428 TNS1Q9HBL0 1735 aaKnown RBP16.67■□□□□ 0.26
SMAD3-205ENST00000558428 PARD3Q8TEW0 1356 aa16.66■□□□□ 0.26
SMAD3-205ENST00000558428 BCL9O00512 1426 aa16.66■□□□□ 0.26
SMAD3-205ENST00000558428 DIAPH1O60610 1272 aaKnown RBP16.66■□□□□ 0.26
SMAD3-205ENST00000558428 PKD1L3Q7Z443 1732 aa16.65■□□□□ 0.26
SMAD3-205ENST00000558428 BAG6P46379 1132 aa16.64■□□□□ 0.25
SMAD3-205ENST00000558428 DEFB132Q7Z7B7 95 aa16.64■□□□□ 0.25
SMAD3-205ENST00000558428 CFAP53Q96M91 514 aa16.64■□□□□ 0.25
SMAD3-205ENST00000558428 COL3A1P02461 1466 aaPredicted RBP16.64■□□□□ 0.25
SMAD3-205ENST00000558428 PCDH11XQ9BZA7 1347 aa16.64■□□□□ 0.25
SMAD3-205ENST00000558428 PCDH11YQ9BZA8 1340 aa16.64■□□□□ 0.25
SMAD3-205ENST00000558428 SULT6B1Q6IMI4 303 aa16.63■□□□□ 0.25
SMAD3-205ENST00000558428 AEBP1Q8IUX7 1158 aa16.63■□□□□ 0.25
SMAD3-205ENST00000558428 APBA3O96018 575 aa16.62■□□□□ 0.25
SMAD3-205ENST00000558428 RALBP1Q15311 655 aa16.62■□□□□ 0.25
SMAD3-205ENST00000558428 ACSBG1Q96GR2 724 aa16.62■□□□□ 0.25
SMAD3-205ENST00000558428 SPG7Q9UQ90 795 aa16.62■□□□□ 0.25
SMAD3-205ENST00000558428 BCL11BQ9C0K0 894 aaPredicted RBP16.61■□□□□ 0.25
SMAD3-205ENST00000558428 NHSQ6T4R5 1651 aa16.61■□□□□ 0.25
SMAD3-205ENST00000558428 U2SURPO15042 1029 aaKnown RBP16.6■□□□□ 0.25
SMAD3-205ENST00000558428 HMOX1P09601 288 aa16.6■□□□□ 0.25
SMAD3-205ENST00000558428 EN1Q05925 392 aaPredicted RBP16.6■□□□□ 0.25
SMAD3-205ENST00000558428 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.6■□□□□ 0.25
SMAD3-205ENST00000558428 KDRP35968 1356 aa16.6■□□□□ 0.25
SMAD3-205ENST00000558428 PLEKHG2Q9H7P9 1386 aa16.6■□□□□ 0.25
SMAD3-205ENST00000558428 DOT1LQ8TEK3 1739 aa16.59■□□□□ 0.25
SMAD3-205ENST00000558428 CYP27B1O15528 508 aa16.59■□□□□ 0.25
SMAD3-205ENST00000558428 KCNQ2O43526 872 aa16.59■□□□□ 0.25
SMAD3-205ENST00000558428 PTF1AQ7RTS3 328 aa16.59■□□□□ 0.25
SMAD3-205ENST00000558428 PLEKHO1Q53GL0 409 aaPredicted RBP16.58■□□□□ 0.24
SMAD3-205ENST00000558428 NUDCQ9Y266 331 aa16.58■□□□□ 0.24
SMAD3-205ENST00000558428 AMOTQ4VCS5 1084 aa16.57■□□□□ 0.24
SMAD3-205ENST00000558428 BTAF1O14981 1849 aa16.56■□□□□ 0.24
SMAD3-205ENST00000558428 MYBBP1AQ9BQG0 1328 aaKnown RBP16.56■□□□□ 0.24
SMAD3-205ENST00000558428 EZH2Q15910 746 aaKnown RBP16.56■□□□□ 0.24
SMAD3-205ENST00000558428 IFNL2Q8IZJ0 200 aa16.56■□□□□ 0.24
SMAD3-205ENST00000558428 SYTL4Q96C24 671 aaPredicted RBP16.56■□□□□ 0.24
SMAD3-205ENST00000558428 PHKG2P15735 406 aa16.55■□□□□ 0.24
SMAD3-205ENST00000558428 PRIM1P49642 420 aaKnown RBP16.55■□□□□ 0.24
SMAD3-205ENST00000558428 ZNF530Q6P9A1 599 aaPredicted RBP16.55■□□□□ 0.24
SMAD3-205ENST00000558428 CAMKK2Q96RR4 588 aa16.55■□□□□ 0.24
SMAD3-205ENST00000558428 PRKRIP1Q9H875 184 aaPredicted RBP16.55■□□□□ 0.24
SMAD3-205ENST00000558428 ITGB4P16144 1822 aa16.54■□□□□ 0.24
SMAD3-205ENST00000558428 RGPD3A6NKT7 1758 aaPredicted RBP16.54■□□□□ 0.24
SMAD3-205ENST00000558428 RGPD4Q7Z3J3 1758 aa16.54■□□□□ 0.24
SMAD3-205ENST00000558428 TOGARAM1Q9Y4F4 1720 aa16.53■□□□□ 0.24
SMAD3-205ENST00000558428 PLSCR1O15162 318 aa16.53■□□□□ 0.24
SMAD3-205ENST00000558428 U2AF1L5P0DN76 240 aaPredicted RBP16.53■□□□□ 0.24
SMAD3-205ENST00000558428 U2AF1Q01081 240 aaKnown RBP eCLIP16.53■□□□□ 0.24
SMAD3-205ENST00000558428 NKX1-1Q15270 411 aaPredicted RBP16.53■□□□□ 0.24
SMAD3-205ENST00000558428 RREB1Q92766 1687 aa16.53■□□□□ 0.24
SMAD3-205ENST00000558428 C1orf141Q5JVX7 400 aa16.52■□□□□ 0.24
SMAD3-205ENST00000558428 HSP90AB1P08238 724 aaKnown RBP16.5■□□□□ 0.23
SMAD3-205ENST00000558428 PRKAR2BP31323 418 aa16.5■□□□□ 0.23
SMAD3-205ENST00000558428 RSPH6AQ9H0K4 717 aa16.5■□□□□ 0.23
SMAD3-205ENST00000558428 NUP188Q5SRE5 1749 aa16.5■□□□□ 0.23
SMAD3-205ENST00000558428 MTHFSDQ2M296 383 aaKnown RBP16.49■□□□□ 0.23
SMAD3-205ENST00000558428 MPRIPQ6WCQ1 1025 aa16.49■□□□□ 0.23
SMAD3-205ENST00000558428 VIRMAQ69YN4 1812 aaKnown RBP16.48■□□□□ 0.23
SMAD3-205ENST00000558428 FCHSD2O94868 740 aa16.48■□□□□ 0.23
SMAD3-205ENST00000558428 AKAP4Q5JQC9 854 aa16.48■□□□□ 0.23
SMAD3-205ENST00000558428 DCAF5Q96JK2 942 aa16.48■□□□□ 0.23
SMAD3-205ENST00000558428 KDM6AO15550 1401 aaPredicted RBP16.47■□□□□ 0.23
SMAD3-205ENST00000558428 TXNRD1Q16881 649 aa16.47■□□□□ 0.23
SMAD3-205ENST00000558428 GAS2L2Q8NHY3 880 aa16.47■□□□□ 0.23
SMAD3-205ENST00000558428 TMOD3Q9NYL9 352 aa16.47■□□□□ 0.23
SMAD3-205ENST00000558428 SCN11AQ9UI33 1791 aa16.46■□□□□ 0.23
SMAD3-205ENST00000558428 ANP32CO43423 234 aa16.46■□□□□ 0.23
SMAD3-205ENST00000558428 PROM2Q8N271 834 aa16.46■□□□□ 0.23
SMAD3-205ENST00000558428 PIGBQ92521 554 aa16.46■□□□□ 0.23
SMAD3-205ENST00000558428 LY75O60449 1722 aa16.45■□□□□ 0.22
SMAD3-205ENST00000558428 ERVV-2B6SEH9 535 aa16.45■□□□□ 0.22
SMAD3-205ENST00000558428 PHACTR3Q96KR7 559 aa16.45■□□□□ 0.22
SMAD3-205ENST00000558428 NBPF14Q5TI25 921 aa16.44■□□□□ 0.22
SMAD3-205ENST00000558428 NEFMP07197 916 aa16.43■□□□□ 0.22
SMAD3-205ENST00000558428 CABP4P57796 275 aa16.43■□□□□ 0.22
SMAD3-205ENST00000558428 PALLDQ8WX93 1383 aa16.42■□□□□ 0.22
SMAD3-205ENST00000558428 MAP3K5Q99683 1374 aa16.42■□□□□ 0.22
SMAD3-205ENST00000558428 GNAT3A8MTJ3 354 aa16.42■□□□□ 0.22
SMAD3-205ENST00000558428 RNMTO43148 476 aaKnown RBP16.42■□□□□ 0.22
SMAD3-205ENST00000558428 WDR43Q15061 677 aaKnown RBP eCLIP16.42■□□□□ 0.22
SMAD3-205ENST00000558428 SLC27A3Q5K4L6 730 aa16.42■□□□□ 0.22
SMAD3-205ENST00000558428 SMARCC1Q92922 1105 aaPredicted RBP16.42■□□□□ 0.22
SMAD3-205ENST00000558428 PNNQ9H307 717 aaKnown RBP16.42■□□□□ 0.22
SMAD3-205ENST00000558428 LGR6Q9HBX8 967 aa16.42■□□□□ 0.22
SMAD3-205ENST00000558428 PSDA5PKW4 1024 aaPredicted RBP16.41■□□□□ 0.22
SMAD3-205ENST00000558428 LRRC4BQ9NT99 713 aa16.41■□□□□ 0.22
SMAD3-205ENST00000558428 ADAMTS7Q9UKP4 1686 aa16.4■□□□□ 0.22
SMAD3-205ENST00000558428 KCNQ4P56696 695 aa16.4■□□□□ 0.22
SMAD3-205ENST00000558428 R3HDM1Q15032 1099 aaKnown RBP16.4■□□□□ 0.22
SMAD3-205ENST00000558428 NFATC2IPQ8NCF5 419 aa16.4■□□□□ 0.22
SMAD3-205ENST00000558428 PLEKHF1Q96S99 279 aa16.4■□□□□ 0.22
SMAD3-205ENST00000558428 ANO8Q9HCE9 1232 aaPredicted RBP16.4■□□□□ 0.22
SMAD3-205ENST00000558428 CCNL1Q9UK58 526 aaPredicted RBP16.4■□□□□ 0.22
SMAD3-205ENST00000558428 ASAP1Q9ULH1 1129 aa16.4■□□□□ 0.22
SMAD3-205ENST00000558428 MAPK8IP3Q9UPT6 1336 aa16.4■□□□□ 0.22
SMAD3-205ENST00000558428 DLG5Q8TDM6 1919 aa16.39■□□□□ 0.21
SMAD3-205ENST00000558428 SLC52A2Q9HAB3 445 aa16.39■□□□□ 0.21
SMAD3-205ENST00000558428 ATG3Q9NT62 314 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms