RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 NUTM1Q86Y26 1132 aa4.32□□□□□ -1.72
ATXN3-248ENST00000558190 GTF3C6Q969F1 213 aa4.32□□□□□ -1.72
ATXN3-248ENST00000558190 USP26Q9BXU7 913 aa4.32□□□□□ -1.72
ATXN3-248ENST00000558190 YEATS4O95619 227 aa4.32□□□□□ -1.72
ATXN3-248ENST00000558190 SLC3A2P08195 630 aaKnown RBP4.32□□□□□ -1.72
ATXN3-248ENST00000558190 SCAND2PQ9GZW5 306 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-248ENST00000558190 KTN1Q86UP2 1357 aaKnown RBP4.32□□□□□ -1.72
ATXN3-248ENST00000558190 NBPF8Q3BBV2 869 aa4.32□□□□□ -1.72
ATXN3-248ENST00000558190 ERC1Q8IUD2 1116 aa4.32□□□□□ -1.72
ATXN3-248ENST00000558190 HINFPQ9BQA5 517 aa4.32□□□□□ -1.72
ATXN3-248ENST00000558190 SERPINA10Q9UK55 444 aa4.32□□□□□ -1.72
ATXN3-248ENST00000558190 SYT1P21579 422 aa4.32□□□□□ -1.72
ATXN3-248ENST00000558190 KIF5BP33176 963 aa4.32□□□□□ -1.72
ATXN3-248ENST00000558190 CCDC181Q5TID7 509 aa4.31□□□□□ -1.72
ATXN3-248ENST00000558190 VPS18Q9P253 973 aa4.31□□□□□ -1.72
ATXN3-248ENST00000558190 JRKLQ9Y4A0 524 aa4.31□□□□□ -1.72
ATXN3-248ENST00000558190 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.31□□□□□ -1.72
ATXN3-248ENST00000558190 TOP1P11387 765 aaKnown RBP4.31□□□□□ -1.72
ATXN3-248ENST00000558190 LRSAM1Q6UWE0 723 aa4.31□□□□□ -1.72
ATXN3-248ENST00000558190 INPP5BP32019 993 aa4.31□□□□□ -1.72
ATXN3-248ENST00000558190 TRDNQ13061 729 aa4.31□□□□□ -1.72
ATXN3-248ENST00000558190 ZNF330Q9Y3S2 320 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-248ENST00000558190 CEP57L1Q8IYX8 460 aa4.31□□□□□ -1.72
ATXN3-248ENST00000558190 MIPOL1Q8TD10 442 aa4.31□□□□□ -1.72
ATXN3-248ENST00000558190 RNASE9P60153 205 aaKnown RBP4.31□□□□□ -1.72
ATXN3-248ENST00000558190 CTAGE15A4D2H0 777 aa4.31□□□□□ -1.72
ATXN3-248ENST00000558190 CTAGE8P0CG41 777 aa4.31□□□□□ -1.72
ATXN3-248ENST00000558190 ZNF569Q5MCW4 686 aa4.31□□□□□ -1.72
ATXN3-248ENST00000558190 CTAGE6Q86UF2 777 aa4.31□□□□□ -1.72
ATXN3-248ENST00000558190 CTAGE4Q8IX94 777 aa4.31□□□□□ -1.72
ATXN3-248ENST00000558190 MYO6Q9UM54 1294 aa4.31□□□□□ -1.72
ATXN3-248ENST00000558190 TLDC2A0PJX2 215 aa4.31□□□□□ -1.72
ATXN3-248ENST00000558190 CTAGE5O15320 804 aa4.31□□□□□ -1.72
ATXN3-248ENST00000558190 GABPB1Q06547 395 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-248ENST00000558190 SYT10Q6XYQ8 523 aa4.31□□□□□ -1.72
ATXN3-248ENST00000558190 SNX21Q969T3 373 aa4.31□□□□□ -1.72
ATXN3-248ENST00000558190 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.31□□□□□ -1.72
ATXN3-248ENST00000558190 CCDC102BQ68D86 513 aa4.31□□□□□ -1.72
ATXN3-248ENST00000558190 NUP62CLQ9H1M0 184 aa4.31□□□□□ -1.72
ATXN3-248ENST00000558190 ZNF397Q8NF99 534 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-248ENST00000558190 TXLNAP40222 546 aa4.31□□□□□ -1.72
ATXN3-248ENST00000558190 NEXNQ0ZGT2 675 aa4.31□□□□□ -1.72
ATXN3-248ENST00000558190 CFAP100Q494V2 611 aa4.31□□□□□ -1.72
ATXN3-248ENST00000558190 GNAI2P04899 355 aa4.31□□□□□ -1.72
ATXN3-248ENST00000558190 PAFAH1B1P43034 410 aa4.31□□□□□ -1.72
ATXN3-248ENST00000558190 TBC1D32Q96NH3 1257 aa4.31□□□□□ -1.72
ATXN3-248ENST00000558190 CEP83Q9Y592 693 aa4.31□□□□□ -1.72
ATXN3-248ENST00000558190 RHOXF2BP0C7M4 288 aa4.31□□□□□ -1.72
ATXN3-248ENST00000558190 RHOXF2Q9BQY4 288 aa4.31□□□□□ -1.72
ATXN3-248ENST00000558190 TMC6Q7Z403 805 aa4.3□□□□□ -1.72
ATXN3-248ENST00000558190 SMARCC1Q92922 1105 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-248ENST00000558190 GBP6Q6ZN66 633 aa4.3□□□□□ -1.72
ATXN3-248ENST00000558190 POLR3DP05423 398 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-248ENST00000558190 WASHC4Q2M389 1173 aa4.3□□□□□ -1.72
ATXN3-248ENST00000558190 ZFYVE27Q5T4F4 411 aa4.3□□□□□ -1.72
ATXN3-248ENST00000558190 EZRP15311 586 aaKnown RBP4.3□□□□□ -1.72
ATXN3-248ENST00000558190 RARSP54136 660 aaKnown RBP4.3□□□□□ -1.72
ATXN3-248ENST00000558190 UBASH3AP57075 661 aa4.3□□□□□ -1.72
ATXN3-248ENST00000558190 IFFO1Q0D2I5 559 aa4.3□□□□□ -1.72
ATXN3-248ENST00000558190 SNW1Q13573 536 aaKnown RBP4.3□□□□□ -1.72
ATXN3-248ENST00000558190 KLHL40Q2TBA0 621 aa4.3□□□□□ -1.72
ATXN3-248ENST00000558190 CCDC175P0C221 793 aa4.3□□□□□ -1.72
ATXN3-248ENST00000558190 MCM3P25205 808 aa4.3□□□□□ -1.72
ATXN3-248ENST00000558190 SMC1AQ14683 1233 aaKnown RBP4.3□□□□□ -1.72
ATXN3-248ENST00000558190 TUBBP07437 444 aa4.3□□□□□ -1.72
ATXN3-248ENST00000558190 RPAP2Q8IXW5 612 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-248ENST00000558190 PPP1R9BQ96SB3 815 aa4.3□□□□□ -1.72
ATXN3-248ENST00000558190 LUZP1Q86V48 1076 aa4.3□□□□□ -1.72
ATXN3-248ENST00000558190 CCDC172P0C7W6 258 aa4.3□□□□□ -1.72
ATXN3-248ENST00000558190 PNMA8AQ86V59 439 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-248ENST00000558190 DIAPH1O60610 1272 aaKnown RBP4.3□□□□□ -1.72
ATXN3-248ENST00000558190 CWC27Q6UX04 472 aaKnown RBP4.3□□□□□ -1.72
ATXN3-248ENST00000558190 SMC5Q8IY18 1101 aa4.3□□□□□ -1.72
ATXN3-248ENST00000558190 CCDC196A0A1B0GTZ2 297 aa4.3□□□□□ -1.72
ATXN3-248ENST00000558190 PRPF40BQ6NWY9 871 aaKnown RBP4.3□□□□□ -1.72
ATXN3-248ENST00000558190 SLU7O95391 586 aaKnown RBP4.3□□□□□ -1.72
ATXN3-248ENST00000558190 GSDMDP57764 484 aa4.3□□□□□ -1.72
ATXN3-248ENST00000558190 JAKMIP1Q96N16 626 aaKnown RBP4.3□□□□□ -1.72
ATXN3-248ENST00000558190 PIP4K2BP78356 416 aa4.3□□□□□ -1.72
ATXN3-248ENST00000558190 AIMP1Q12904 312 aaKnown RBP4.3□□□□□ -1.72
ATXN3-248ENST00000558190 NECAB1Q8N987 351 aa4.3□□□□□ -1.72
ATXN3-248ENST00000558190 CCDC50Q8IVM0 306 aa4.3□□□□□ -1.72
ATXN3-248ENST00000558190 ANKRD1Q15327 319 aa4.3□□□□□ -1.72
ATXN3-248ENST00000558190 PPM1EQ8WY54 764 aa4.3□□□□□ -1.72
ATXN3-248ENST00000558190 TRAK1Q9UPV9 953 aa4.3□□□□□ -1.72
ATXN3-248ENST00000558190 ZNF428Q96B54 188 aa4.3□□□□□ -1.72
ATXN3-248ENST00000558190 EIF5P55010 431 aaKnown RBP4.29□□□□□ -1.72
ATXN3-248ENST00000558190 JMYQ8N9B5 988 aa4.29□□□□□ -1.72
ATXN3-248ENST00000558190 HCLS1P14317 486 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-248ENST00000558190 JPH2Q9BR39 696 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-248ENST00000558190 DAAM2Q86T65 1068 aa4.29□□□□□ -1.72
ATXN3-248ENST00000558190 CNPY2Q9Y2B0 182 aa4.29□□□□□ -1.72
ATXN3-248ENST00000558190 RASIP1Q5U651 963 aa4.29□□□□□ -1.72
ATXN3-248ENST00000558190 RAB11FIP4Q86YS3 637 aa4.29□□□□□ -1.72
ATXN3-248ENST00000558190 KRT85P78386 507 aa4.29□□□□□ -1.72
ATXN3-248ENST00000558190 IMMTQ16891 758 aaKnown RBP4.29□□□□□ -1.72
ATXN3-248ENST00000558190 KCNK9Q9NPC2 374 aa4.29□□□□□ -1.72
ATXN3-248ENST00000558190 BMP2KQ9NSY1 1161 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-248ENST00000558190 CAVIN2O95810 425 aa4.29□□□□□ -1.72
ATXN3-248ENST00000558190 SF3A3Q12874 501 aaKnown RBP eCLIP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms