RNA–Protein interactions for RNA: ENST00000558006.1

AC009996.1-201, humanhuman

TSL 5 BASIC

Gene AC009996.1, Length 653 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009996.1-201ENST00000558006 ROCK2O75116 1388 aaKnown RBP13.54□□□□□ -0.24
AC009996.1-201ENST00000558006 ZBTB7AO95365 584 aa13.53□□□□□ -0.24
AC009996.1-201ENST00000558006 ARHGEF25Q86VW2 580 aa13.53□□□□□ -0.24
AC009996.1-201ENST00000558006 SIN3AQ96ST3 1273 aa13.52□□□□□ -0.25
AC009996.1-201ENST00000558006 TTC21BQ7Z4L5 1316 aa13.52□□□□□ -0.25
AC009996.1-201ENST00000558006 NFAT5O94916 1531 aa13.51□□□□□ -0.25
AC009996.1-201ENST00000558006 PTGER2P43116 358 aa13.51□□□□□ -0.25
AC009996.1-201ENST00000558006 MON2Q7Z3U7 1717 aa13.5□□□□□ -0.25
AC009996.1-201ENST00000558006 BCL9O00512 1426 aa13.5□□□□□ -0.25
AC009996.1-201ENST00000558006 STK25O00506 426 aa13.5□□□□□ -0.25
AC009996.1-201ENST00000558006 CSB-PGBD3P0DP91 1061 aa13.5□□□□□ -0.25
AC009996.1-201ENST00000558006 FXR2P51116 673 aaKnown RBP eCLIP13.5□□□□□ -0.25
AC009996.1-201ENST00000558006 NEUROD1Q13562 356 aa13.5□□□□□ -0.25
AC009996.1-201ENST00000558006 TXNRD1Q16881 649 aa13.5□□□□□ -0.25
AC009996.1-201ENST00000558006 KCNH5Q8NCM2 988 aa13.5□□□□□ -0.25
AC009996.1-201ENST00000558006 CARD10Q9BWT7 1032 aa13.5□□□□□ -0.25
AC009996.1-201ENST00000558006 TSPYL2Q9H2G4 693 aaPredicted RBP13.5□□□□□ -0.25
AC009996.1-201ENST00000558006 TTC21AQ8NDW8 1320 aa13.49□□□□□ -0.25
AC009996.1-201ENST00000558006 CDCA7Q9BWT1 371 aaPredicted RBP13.49□□□□□ -0.25
AC009996.1-201ENST00000558006 KAT6BQ8WYB5 2073 aa13.49□□□□□ -0.25
AC009996.1-201ENST00000558006 KTN1Q86UP2 1357 aaKnown RBP13.48□□□□□ -0.25
AC009996.1-201ENST00000558006 NHSQ6T4R5 1651 aa13.48□□□□□ -0.25
AC009996.1-201ENST00000558006 EXOC5O00471 708 aa13.48□□□□□ -0.25
AC009996.1-201ENST00000558006 LTN1O94822 1766 aa13.48□□□□□ -0.25
AC009996.1-201ENST00000558006 UTRNP46939 3433 aa13.47□□□□□ -0.25
AC009996.1-201ENST00000558006 SLC15A2Q16348 729 aa13.47□□□□□ -0.25
AC009996.1-201ENST00000558006 STK32BQ9NY57 414 aa13.47□□□□□ -0.25
AC009996.1-201ENST00000558006 BTAF1O14981 1849 aa13.46□□□□□ -0.25
AC009996.1-201ENST00000558006 ABCC6O95255 1503 aa13.46□□□□□ -0.25
AC009996.1-201ENST00000558006 TRIM26Q12899 539 aaPredicted RBP13.46□□□□□ -0.25
AC009996.1-201ENST00000558006 ACSBG1Q96GR2 724 aa13.46□□□□□ -0.25
AC009996.1-201ENST00000558006 FHDC1Q9C0D6 1143 aaPredicted RBP13.46□□□□□ -0.25
AC009996.1-201ENST00000558006 TNS2Q63HR2 1409 aa13.46□□□□□ -0.26
AC009996.1-201ENST00000558006 USP54Q70EL1 1684 aa13.45□□□□□ -0.26
AC009996.1-201ENST00000558006 CHRDL2Q6WN34 429 aa13.45□□□□□ -0.26
AC009996.1-201ENST00000558006 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.45□□□□□ -0.26
AC009996.1-201ENST00000558006 SGIP1Q9BQI5 828 aa13.45□□□□□ -0.26
AC009996.1-201ENST00000558006 SYT17Q9BSW7 474 aa13.45□□□□□ -0.26
AC009996.1-201ENST00000558006 PCGF6Q9BYE7 350 aa13.45□□□□□ -0.26
AC009996.1-201ENST00000558006 CCDC7Q96M83 1385 aa13.45□□□□□ -0.26
AC009996.1-201ENST00000558006 PAPPAQ13219 1627 aa13.44□□□□□ -0.26
AC009996.1-201ENST00000558006 CHD4Q14839 1912 aa13.43□□□□□ -0.26
AC009996.1-201ENST00000558006 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.43□□□□□ -0.26
AC009996.1-201ENST00000558006 NME9Q86XW9 330 aa13.43□□□□□ -0.26
AC009996.1-201ENST00000558006 ZFP91Q96JP5 570 aaPredicted RBP13.43□□□□□ -0.26
AC009996.1-201ENST00000558006 MTFR1LQ9H019 292 aa13.43□□□□□ -0.26
AC009996.1-201ENST00000558006 TSHZ2Q9NRE2 1034 aa13.43□□□□□ -0.26
AC009996.1-201ENST00000558006 SBNO2Q9Y2G9 1366 aa13.43□□□□□ -0.26
AC009996.1-201ENST00000558006 CD163L1Q9NR16 1453 aa13.42□□□□□ -0.26
AC009996.1-201ENST00000558006 ERBB3P21860 1342 aa13.42□□□□□ -0.26
AC009996.1-201ENST00000558006 ZNF784Q8NCA9 323 aaPredicted RBP13.42□□□□□ -0.26
AC009996.1-201ENST00000558006 NLRP2Q9NX02 1062 aa13.42□□□□□ -0.26
AC009996.1-201ENST00000558006 ZNF827Q17R98 1081 aa13.41□□□□□ -0.26
AC009996.1-201ENST00000558006 TMC1Q8TDI8 760 aa13.41□□□□□ -0.26
AC009996.1-201ENST00000558006 CARD11Q9BXL7 1154 aa13.41□□□□□ -0.26
AC009996.1-201ENST00000558006 STK24Q9Y6E0 443 aa13.41□□□□□ -0.26
AC009996.1-201ENST00000558006 USP31Q70CQ4 1352 aa13.41□□□□□ -0.26
AC009996.1-201ENST00000558006 IL2RBP14784 551 aa13.4□□□□□ -0.26
AC009996.1-201ENST00000558006 NKX1-1Q15270 411 aaPredicted RBP13.4□□□□□ -0.26
AC009996.1-201ENST00000558006 ZNF467Q7Z7K2 595 aaPredicted RBP13.4□□□□□ -0.26
AC009996.1-201ENST00000558006 LRRC4BQ9NT99 713 aa13.4□□□□□ -0.26
AC009996.1-201ENST00000558006 HDGFL2Q7Z4V5 671 aaPredicted RBP13.39□□□□□ -0.27
AC009996.1-201ENST00000558006 ANKRD24Q8TF21 1146 aa13.39□□□□□ -0.27
AC009996.1-201ENST00000558006 PIP4P2Q8N4L2 257 aa13.38□□□□□ -0.27
AC009996.1-201ENST00000558006 ARXQ96QS3 562 aa13.38□□□□□ -0.27
AC009996.1-201ENST00000558006 SLC12A5Q9H2X9 1139 aa13.38□□□□□ -0.27
AC009996.1-201ENST00000558006 TUBGCP6Q96RT7 1819 aa13.38□□□□□ -0.27
AC009996.1-201ENST00000558006 EDC4Q6P2E9 1401 aaKnown RBP13.38□□□□□ -0.27
AC009996.1-201ENST00000558006 RGPD2P0DJD1 1756 aa13.37□□□□□ -0.27
AC009996.1-201ENST00000558006 TONSLQ96HA7 1378 aa13.37□□□□□ -0.27
AC009996.1-201ENST00000558006 KCNQ4P56696 695 aa13.37□□□□□ -0.27
AC009996.1-201ENST00000558006 FAM208AQ9UK61 1670 aaKnown RBP13.37□□□□□ -0.27
AC009996.1-201ENST00000558006 A0A1W2PP64 1363 aa13.36□□□□□ -0.27
AC009996.1-201ENST00000558006 QSER1Q2KHR3 1735 aa13.36□□□□□ -0.27
AC009996.1-201ENST00000558006 DDX54Q8TDD1 881 aaKnown RBP13.35□□□□□ -0.27
AC009996.1-201ENST00000558006 LTV1Q96GA3 475 aaPredicted RBP13.35□□□□□ -0.27
AC009996.1-201ENST00000558006 TERF2IPQ9NYB0 399 aa13.35□□□□□ -0.27
AC009996.1-201ENST00000558006 COL24A1Q17RW2 1714 aa13.35□□□□□ -0.27
AC009996.1-201ENST00000558006 DOT1LQ8TEK3 1739 aa13.35□□□□□ -0.27
AC009996.1-201ENST00000558006 SHANK3Q9BYB0 1731 aa13.35□□□□□ -0.27
AC009996.1-201ENST00000558006 GTPBP6O43824 516 aaPredicted RBP13.34□□□□□ -0.27
AC009996.1-201ENST00000558006 FBLN1P23142 703 aa13.33□□□□□ -0.28
AC009996.1-201ENST00000558006 PNPLA7Q6ZV29 1317 aa13.33□□□□□ -0.28
AC009996.1-201ENST00000558006 LY75O60449 1722 aa13.33□□□□□ -0.28
AC009996.1-201ENST00000558006 MAP3K5Q99683 1374 aa13.32□□□□□ -0.28
AC009996.1-201ENST00000558006 GOLGB1Q14789 3259 aaKnown RBP13.32□□□□□ -0.28
AC009996.1-201ENST00000558006 IP6K1Q92551 441 aa13.32□□□□□ -0.28
AC009996.1-201ENST00000558006 SENP3-EIF4A1A0A087X0R7 540 aa13.31□□□□□ -0.28
AC009996.1-201ENST00000558006 PRIM1P49642 420 aaKnown RBP13.31□□□□□ -0.28
AC009996.1-201ENST00000558006 PDAP1Q13442 181 aaKnown RBP13.31□□□□□ -0.28
AC009996.1-201ENST00000558006 GPR162Q16538 588 aa13.31□□□□□ -0.28
AC009996.1-201ENST00000558006 SYTL4Q96C24 671 aaPredicted RBP13.31□□□□□ -0.28
AC009996.1-201ENST00000558006 PUS7Q96PZ0 661 aaKnown RBP13.31□□□□□ -0.28
AC009996.1-201ENST00000558006 RYDENQ9NUL5 291 aaKnown RBP13.31□□□□□ -0.28
AC009996.1-201ENST00000558006 C1QTNF8P60827 252 aa13.3□□□□□ -0.28
AC009996.1-201ENST00000558006 SLC27A3Q5K4L6 730 aa13.3□□□□□ -0.28
AC009996.1-201ENST00000558006 NLGN2Q8NFZ4 835 aa13.3□□□□□ -0.28
AC009996.1-201ENST00000558006 NSD2O96028 1365 aa13.3□□□□□ -0.28
AC009996.1-201ENST00000558006 PELP1Q8IZL8 1130 aaKnown RBP13.29□□□□□ -0.28
AC009996.1-201ENST00000558006 COG3Q96JB2 828 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms