RNA–Protein interactions for RNA: ENST00000557696.5

CLMN-209, Transcript of calmin, humanhuman

TSL 2

Gene CLMN, Length 746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMN-209ENST00000557696 CARD10Q9BWT7 1032 aa12.99□□□□□ -0.33
CLMN-209ENST00000557696 PNNQ9H307 717 aaKnown RBP12.99□□□□□ -0.33
CLMN-209ENST00000557696 USP35Q9P2H5 1018 aa12.99□□□□□ -0.33
CLMN-209ENST00000557696 NCAPD2Q15021 1401 aa12.98□□□□□ -0.33
CLMN-209ENST00000557696 RUNDC1Q96C34 613 aa12.98□□□□□ -0.33
CLMN-209ENST00000557696 CCDC9Q9Y3X0 531 aaKnown RBP12.98□□□□□ -0.33
CLMN-209ENST00000557696 RGPD2P0DJD1 1756 aa12.98□□□□□ -0.33
CLMN-209ENST00000557696 MAPK8IP3Q9UPT6 1336 aa12.97□□□□□ -0.33
CLMN-209ENST00000557696 NEFMP07197 916 aa12.97□□□□□ -0.33
CLMN-209ENST00000557696 VSIG10Q8N0Z9 540 aa12.97□□□□□ -0.33
CLMN-209ENST00000557696 PLEKHF1Q96S99 279 aa12.97□□□□□ -0.33
CLMN-209ENST00000557696 SENP3-EIF4A1A0A087X0R7 540 aa12.96□□□□□ -0.33
CLMN-209ENST00000557696 VPS72Q15906 364 aa12.96□□□□□ -0.33
CLMN-209ENST00000557696 RAPGEF4Q8WZA2 1011 aa12.96□□□□□ -0.33
CLMN-209ENST00000557696 YTHDC1Q96MU7 727 aaKnown RBP12.96□□□□□ -0.33
CLMN-209ENST00000557696 SPATA31A1Q5TZJ5 1347 aa12.95□□□□□ -0.34
CLMN-209ENST00000557696 SPATA31A5Q5VU36 1347 aa12.95□□□□□ -0.34
CLMN-209ENST00000557696 SPATA31A7Q8IWB4 1347 aa12.95□□□□□ -0.34
CLMN-209ENST00000557696 TATP17735 454 aaPredicted RBP12.95□□□□□ -0.34
CLMN-209ENST00000557696 PHACTR3Q96KR7 559 aa12.95□□□□□ -0.34
CLMN-209ENST00000557696 TAOK2Q9UL54 1235 aa12.95□□□□□ -0.34
CLMN-209ENST00000557696 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.95□□□□□ -0.34
CLMN-209ENST00000557696 MEGF6O75095 1541 aa12.94□□□□□ -0.34
CLMN-209ENST00000557696 IL2RBP14784 551 aa12.94□□□□□ -0.34
CLMN-209ENST00000557696 TCP11L2Q8N4U5 519 aa12.94□□□□□ -0.34
CLMN-209ENST00000557696 TRPC5Q9UL62 973 aaPredicted RBP12.94□□□□□ -0.34
CLMN-209ENST00000557696 APAF1O14727 1248 aa12.93□□□□□ -0.34
CLMN-209ENST00000557696 HNRNPUQ00839 825 aaKnown RBP eCLIP12.93□□□□□ -0.34
CLMN-209ENST00000557696 THRAP3Q9Y2W1 955 aaKnown RBP12.93□□□□□ -0.34
CLMN-209ENST00000557696 RRP7AQ9Y3A4 280 aaKnown RBP12.93□□□□□ -0.34
CLMN-209ENST00000557696 ATRNO75882 1429 aa12.93□□□□□ -0.34
CLMN-209ENST00000557696 PLEKHO1Q53GL0 409 aaPredicted RBP12.92□□□□□ -0.34
CLMN-209ENST00000557696 ZNF772Q68DY9 489 aaPredicted RBP12.92□□□□□ -0.34
CLMN-209ENST00000557696 QTRT2Q9H974 415 aaKnown RBP12.92□□□□□ -0.34
CLMN-209ENST00000557696 OVOS2A0A0G2JMS6 1433 aa12.91□□□□□ -0.34
CLMN-209ENST00000557696 DISP2A7MBM2 1401 aa12.91□□□□□ -0.34
CLMN-209ENST00000557696 TMPOP42166 694 aaKnown RBP12.91□□□□□ -0.34
CLMN-209ENST00000557696 NEUROD2Q15784 382 aa12.91□□□□□ -0.34
CLMN-209ENST00000557696 NFE2L2Q16236 605 aa12.91□□□□□ -0.34
CLMN-209ENST00000557696 MTHFSDQ2M296 383 aaKnown RBP12.91□□□□□ -0.34
CLMN-209ENST00000557696 GAS2L2Q8NHY3 880 aa12.91□□□□□ -0.34
CLMN-209ENST00000557696 GJD4Q96KN9 370 aaPredicted RBP12.91□□□□□ -0.34
CLMN-209ENST00000557696 SALL2Q9Y467 1007 aaPredicted RBP12.91□□□□□ -0.34
CLMN-209ENST00000557696 FAM98CQ17RN3 349 aaKnown RBP12.9□□□□□ -0.34
CLMN-209ENST00000557696 AMOTQ4VCS5 1084 aa12.9□□□□□ -0.34
CLMN-209ENST00000557696 BARGINQ6ZT62 677 aa12.9□□□□□ -0.34
CLMN-209ENST00000557696 SPG7Q9UQ90 795 aa12.9□□□□□ -0.34
CLMN-209ENST00000557696 PLEKHG2Q9H7P9 1386 aa12.9□□□□□ -0.34
CLMN-209ENST00000557696 PARP4Q9UKK3 1724 aaKnown RBP12.9□□□□□ -0.34
CLMN-209ENST00000557696 GLI3P10071 1580 aa12.9□□□□□ -0.35
CLMN-209ENST00000557696 RIPK4P57078 832 aa12.89□□□□□ -0.35
CLMN-209ENST00000557696 ZNF530Q6P9A1 599 aaPredicted RBP12.89□□□□□ -0.35
CLMN-209ENST00000557696 CDCA7Q9BWT1 371 aaPredicted RBP12.89□□□□□ -0.35
CLMN-209ENST00000557696 A0A0G2JS52 829 aa12.88□□□□□ -0.35
CLMN-209ENST00000557696 MYT1Q01538 1121 aa12.88□□□□□ -0.35
CLMN-209ENST00000557696 ZCRB1Q8TBF4 217 aaKnown RBP12.88□□□□□ -0.35
CLMN-209ENST00000557696 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.88□□□□□ -0.35
CLMN-209ENST00000557696 WNK3Q9BYP7 1800 aa12.88□□□□□ -0.35
CLMN-209ENST00000557696 C1orf141Q5JVX7 400 aa12.87□□□□□ -0.35
CLMN-209ENST00000557696 RGS17Q9UGC6 210 aaPredicted RBP12.87□□□□□ -0.35
CLMN-209ENST00000557696 PCDH11XQ9BZA7 1347 aa12.87□□□□□ -0.35
CLMN-209ENST00000557696 PCDH11YQ9BZA8 1340 aa12.87□□□□□ -0.35
CLMN-209ENST00000557696 MAP3K5Q99683 1374 aa12.86□□□□□ -0.35
CLMN-209ENST00000557696 PKD1L3Q7Z443 1732 aa12.86□□□□□ -0.35
CLMN-209ENST00000557696 EXOC5O00471 708 aa12.86□□□□□ -0.35
CLMN-209ENST00000557696 LMOD3Q0VAK6 560 aa12.86□□□□□ -0.35
CLMN-209ENST00000557696 DDB1Q16531 1140 aa12.86□□□□□ -0.35
CLMN-209ENST00000557696 AKAP4Q5JQC9 854 aa12.86□□□□□ -0.35
CLMN-209ENST00000557696 NGEFQ8N5V2 710 aa12.86□□□□□ -0.35
CLMN-209ENST00000557696 TNS2Q63HR2 1409 aa12.86□□□□□ -0.35
CLMN-209ENST00000557696 LRRC37A3O60309 1634 aa12.85□□□□□ -0.35
CLMN-209ENST00000557696 GNAT3A8MTJ3 354 aa12.85□□□□□ -0.35
CLMN-209ENST00000557696 CYP27B1O15528 508 aa12.85□□□□□ -0.35
CLMN-209ENST00000557696 PHKG2P15735 406 aa12.85□□□□□ -0.35
CLMN-209ENST00000557696 IFNL2Q8IZJ0 200 aa12.85□□□□□ -0.35
CLMN-209ENST00000557696 DDX54Q8TDD1 881 aaKnown RBP12.85□□□□□ -0.35
CLMN-209ENST00000557696 RTF1Q92541 710 aaKnown RBP12.85□□□□□ -0.35
CLMN-209ENST00000557696 TRIM35Q9UPQ4 493 aa12.85□□□□□ -0.35
CLMN-209ENST00000557696 ZBED9Q6R2W3 1325 aa12.85□□□□□ -0.35
CLMN-209ENST00000557696 THSD7AQ9UPZ6 1657 aa12.84□□□□□ -0.35
CLMN-209ENST00000557696 RBM6P78332 1123 aaKnown RBP12.84□□□□□ -0.35
CLMN-209ENST00000557696 DCTN1Q14203 1278 aa12.84□□□□□ -0.35
CLMN-209ENST00000557696 CCDC27Q2M243 656 aa12.84□□□□□ -0.35
CLMN-209ENST00000557696 MCM10Q7L590 875 aa12.84□□□□□ -0.35
CLMN-209ENST00000557696 ONECUT3O60422 494 aaPredicted RBP12.83□□□□□ -0.36
CLMN-209ENST00000557696 RXRBP28702 533 aa12.83□□□□□ -0.36
CLMN-209ENST00000557696 POTEAQ6S8J7 498 aa12.83□□□□□ -0.36
CLMN-209ENST00000557696 WWC1Q8IX03 1113 aa12.83□□□□□ -0.36
CLMN-209ENST00000557696 SEPT12Q8IYM1 358 aa12.83□□□□□ -0.36
CLMN-209ENST00000557696 THUMPD2Q9BTF0 503 aaKnown RBP12.83□□□□□ -0.36
CLMN-209ENST00000557696 SHANK3Q9BYB0 1731 aa12.82□□□□□ -0.36
CLMN-209ENST00000557696 HTATSF1O43719 755 aaKnown RBP12.82□□□□□ -0.36
CLMN-209ENST00000557696 HSP90AB1P08238 724 aaKnown RBP12.82□□□□□ -0.36
CLMN-209ENST00000557696 MPRIPQ6WCQ1 1025 aa12.82□□□□□ -0.36
CLMN-209ENST00000557696 ZNF521Q96K83 1311 aa12.82□□□□□ -0.36
CLMN-209ENST00000557696 PDE3BQ13370 1112 aa12.81□□□□□ -0.36
CLMN-209ENST00000557696 IL17REQ8NFR9 667 aa12.81□□□□□ -0.36
CLMN-209ENST00000557696 DCAF5Q96JK2 942 aa12.81□□□□□ -0.36
CLMN-209ENST00000557696 LGR6Q9HBX8 967 aa12.81□□□□□ -0.36
CLMN-209ENST00000557696 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms