RNA–Protein interactions for RNA: ENST00000556989.1

NUMB-224, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 2

Gene NUMB, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-224ENST00000556989 COL3A1P02461 1466 aaPredicted RBP8.34□□□□□ -1.07
NUMB-224ENST00000556989 PLEKHG3A1L390 1219 aa8.34□□□□□ -1.07
NUMB-224ENST00000556989 KHSRPQ92945 711 aaKnown RBP eCLIP8.34□□□□□ -1.07
NUMB-224ENST00000556989 YTHDC1Q96MU7 727 aaKnown RBP8.34□□□□□ -1.07
NUMB-224ENST00000556989 SMG6Q86US8 1419 aaKnown RBP8.34□□□□□ -1.08
NUMB-224ENST00000556989 C1orf167Q5SNV9 1468 aa8.33□□□□□ -1.08
NUMB-224ENST00000556989 NHSL1Q5SYE7 1610 aa8.33□□□□□ -1.08
NUMB-224ENST00000556989 LTBP4Q8N2S1 1624 aa8.33□□□□□ -1.08
NUMB-224ENST00000556989 NUTM2FA1L443 756 aa8.33□□□□□ -1.08
NUMB-224ENST00000556989 PPP2R1AP30153 589 aa8.33□□□□□ -1.08
NUMB-224ENST00000556989 PHRF1Q9P1Y6 1649 aaKnown RBP8.33□□□□□ -1.08
NUMB-224ENST00000556989 ACEP12821 1306 aa8.32□□□□□ -1.08
NUMB-224ENST00000556989 BLMP54132 1417 aaPredicted RBP8.32□□□□□ -1.08
NUMB-224ENST00000556989 ABCA3Q99758 1704 aa8.32□□□□□ -1.08
NUMB-224ENST00000556989 ZNF335Q9H4Z2 1342 aaPredicted RBP8.32□□□□□ -1.08
NUMB-224ENST00000556989 RGPD1P0DJD0 1748 aa8.31□□□□□ -1.08
NUMB-224ENST00000556989 CDK12Q9NYV4 1490 aaPredicted RBP8.31□□□□□ -1.08
NUMB-224ENST00000556989 FYB1O15117 783 aa8.31□□□□□ -1.08
NUMB-224ENST00000556989 PROSER2Q86WR7 435 aaPredicted RBP8.31□□□□□ -1.08
NUMB-224ENST00000556989 GGNBP2Q9H3C7 697 aa8.3□□□□□ -1.08
NUMB-224ENST00000556989 RYDENQ9NUL5 291 aaKnown RBP8.3□□□□□ -1.08
NUMB-224ENST00000556989 NFAT5O94916 1531 aa8.3□□□□□ -1.08
NUMB-224ENST00000556989 INSRP06213 1382 aa8.3□□□□□ -1.08
NUMB-224ENST00000556989 MSH6P52701 1360 aa8.3□□□□□ -1.08
NUMB-224ENST00000556989 TPRNQ4KMQ1 711 aa8.3□□□□□ -1.08
NUMB-224ENST00000556989 PNISRQ8TF01 805 aaKnown RBP8.3□□□□□ -1.08
NUMB-224ENST00000556989 MED1Q15648 1581 aaPredicted RBP8.3□□□□□ -1.08
NUMB-224ENST00000556989 TTC21BQ7Z4L5 1316 aa8.29□□□□□ -1.08
NUMB-224ENST00000556989 NUDT7P0C024 238 aa8.29□□□□□ -1.08
NUMB-224ENST00000556989 C14orf37Q86TY3 774 aa8.29□□□□□ -1.08
NUMB-224ENST00000556989 MORC1Q86VD1 984 aa8.29□□□□□ -1.08
NUMB-224ENST00000556989 NME9Q86XW9 330 aa8.29□□□□□ -1.08
NUMB-224ENST00000556989 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.29□□□□□ -1.08
NUMB-224ENST00000556989 ZNF687Q8N1G0 1237 aa8.29□□□□□ -1.08
NUMB-224ENST00000556989 PMFBP1Q8TBY8 1022 aa8.29□□□□□ -1.08
NUMB-224ENST00000556989 C19orf44Q9H6X5 657 aa8.29□□□□□ -1.08
NUMB-224ENST00000556989 PCDHGA4Q9Y5G9 962 aa8.29□□□□□ -1.08
NUMB-224ENST00000556989 SLIT3O75094 1523 aa8.29□□□□□ -1.08
NUMB-224ENST00000556989 AATKQ6ZMQ8 1374 aa8.29□□□□□ -1.08
NUMB-224ENST00000556989 USP31Q70CQ4 1352 aa8.29□□□□□ -1.08
NUMB-224ENST00000556989 TTC21AQ8NDW8 1320 aa8.28□□□□□ -1.08
NUMB-224ENST00000556989 DLG5Q8TDM6 1919 aa8.28□□□□□ -1.08
NUMB-224ENST00000556989 SLC34A2O95436 690 aa8.28□□□□□ -1.08
NUMB-224ENST00000556989 PXDNQ92626 1479 aa8.28□□□□□ -1.08
NUMB-224ENST00000556989 ROBO1Q9Y6N7 1651 aa8.28□□□□□ -1.08
NUMB-224ENST00000556989 RGPD5Q99666 1765 aa8.28□□□□□ -1.08
NUMB-224ENST00000556989 IQSEC2Q5JU85 1478 aa8.28□□□□□ -1.08
NUMB-224ENST00000556989 FAM9BQ8IZU0 186 aa8.28□□□□□ -1.08
NUMB-224ENST00000556989 RGPD2P0DJD1 1756 aa8.27□□□□□ -1.09
NUMB-224ENST00000556989 PNPLA6Q8IY17 1366 aa8.27□□□□□ -1.09
NUMB-224ENST00000556989 TNNT2P45379 298 aaPredicted RBP8.26□□□□□ -1.09
NUMB-224ENST00000556989 NGDNQ8NEJ9 315 aaKnown RBP8.26□□□□□ -1.09
NUMB-224ENST00000556989 GPHNQ9NQX3 736 aaPredicted RBP8.26□□□□□ -1.09
NUMB-224ENST00000556989 CAMTA1Q9Y6Y1 1673 aa8.26□□□□□ -1.09
NUMB-224ENST00000556989 FOXK1P85037 733 aa8.26□□□□□ -1.09
NUMB-224ENST00000556989 CADPS2Q86UW7 1296 aa8.26□□□□□ -1.09
NUMB-224ENST00000556989 ORAI2Q96SN7 254 aa8.26□□□□□ -1.09
NUMB-224ENST00000556989 AHDC1Q5TGY3 1603 aaPredicted RBP8.25□□□□□ -1.09
NUMB-224ENST00000556989 HNRNPUQ00839 825 aaKnown RBP eCLIP8.25□□□□□ -1.09
NUMB-224ENST00000556989 ESCO1Q5FWF5 840 aa8.25□□□□□ -1.09
NUMB-224ENST00000556989 PLPP6Q8IY26 295 aa8.25□□□□□ -1.09
NUMB-224ENST00000556989 VIRMAQ69YN4 1812 aaKnown RBP8.25□□□□□ -1.09
NUMB-224ENST00000556989 COL18A1P39060 1754 aa8.25□□□□□ -1.09
NUMB-224ENST00000556989 ZBED9Q6R2W3 1325 aa8.24□□□□□ -1.09
NUMB-224ENST00000556989 CENPBP07199 599 aaPredicted RBP8.24□□□□□ -1.09
NUMB-224ENST00000556989 ATF3P18847 181 aa8.24□□□□□ -1.09
NUMB-224ENST00000556989 MTHFSP49914 203 aa8.24□□□□□ -1.09
NUMB-224ENST00000556989 COG3Q96JB2 828 aa8.24□□□□□ -1.09
NUMB-224ENST00000556989 TNS3Q68CZ2 1445 aa8.24□□□□□ -1.09
NUMB-224ENST00000556989 FAM208AQ9UK61 1670 aaKnown RBP8.24□□□□□ -1.09
NUMB-224ENST00000556989 DSG2Q14126 1118 aa8.23□□□□□ -1.09
NUMB-224ENST00000556989 LHX6Q9UPM6 363 aa8.23□□□□□ -1.09
NUMB-224ENST00000556989 POLKQ9UBT6 870 aa8.23□□□□□ -1.09
NUMB-224ENST00000556989 SBNO1A3KN83 1393 aa8.22□□□□□ -1.09
NUMB-224ENST00000556989 COL22A1Q8NFW1 1626 aaPredicted RBP8.22□□□□□ -1.09
NUMB-224ENST00000556989 FBLN1P23142 703 aa8.22□□□□□ -1.09
NUMB-224ENST00000556989 EMILIN1Q9Y6C2 1016 aa8.22□□□□□ -1.09
NUMB-224ENST00000556989 ABCC6O95255 1503 aa8.22□□□□□ -1.09
NUMB-224ENST00000556989 LMO7Q8WWI1 1683 aa8.22□□□□□ -1.09
NUMB-224ENST00000556989 USP19O94966 1318 aa8.22□□□□□ -1.09
NUMB-224ENST00000556989 PHLPP1O60346 1717 aa8.22□□□□□ -1.09
NUMB-224ENST00000556989 COL16A1Q07092 1604 aaPredicted RBP8.22□□□□□ -1.09
NUMB-224ENST00000556989 FOXO3O43524 673 aa8.21□□□□□ -1.09
NUMB-224ENST00000556989 WDR43Q15061 677 aaKnown RBP eCLIP8.21□□□□□ -1.09
NUMB-224ENST00000556989 ADAMTS8Q9UP79 889 aa8.21□□□□□ -1.09
NUMB-224ENST00000556989 NPHP3Q7Z494 1330 aa8.21□□□□□ -1.09
NUMB-224ENST00000556989 RTL1A6NKG5 1358 aa8.21□□□□□ -1.1
NUMB-224ENST00000556989 FLT4P35916 1363 aa8.21□□□□□ -1.1
NUMB-224ENST00000556989 XPCQ01831 940 aaPredicted RBP8.21□□□□□ -1.1
NUMB-224ENST00000556989 RRS1Q15050 365 aaKnown RBP8.21□□□□□ -1.1
NUMB-224ENST00000556989 BRINP3Q76B58 766 aa8.21□□□□□ -1.1
NUMB-224ENST00000556989 PTCD2Q8WV60 388 aaKnown RBP8.21□□□□□ -1.1
NUMB-224ENST00000556989 CFAP53Q96M91 514 aa8.21□□□□□ -1.1
NUMB-224ENST00000556989 KIF24Q5T7B8 1368 aa8.2□□□□□ -1.1
NUMB-224ENST00000556989 ANKRD13DQ6ZTN6 518 aa8.2□□□□□ -1.1
NUMB-224ENST00000556989 MAP3K19Q56UN5 1328 aa8.2□□□□□ -1.1
NUMB-224ENST00000556989 PSME1Q06323 249 aa8.19□□□□□ -1.1
NUMB-224ENST00000556989 ABTB2Q8N961 1025 aa8.19□□□□□ -1.1
NUMB-224ENST00000556989 DDX17Q92841 729 aaKnown RBP8.19□□□□□ -1.1
NUMB-224ENST00000556989 WNK3Q9BYP7 1800 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms