RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 IL2RBP14784 551 aa15.83■□□□□ 0.12
SLIRP-205ENST00000556310 EMILIN1Q9Y6C2 1016 aa15.83■□□□□ 0.12
SLIRP-205ENST00000556310 SHANK3Q9BYB0 1731 aa15.82■□□□□ 0.12
SLIRP-205ENST00000556310 RGPD3A6NKT7 1758 aaPredicted RBP15.82■□□□□ 0.12
SLIRP-205ENST00000556310 RGPD4Q7Z3J3 1758 aa15.82■□□□□ 0.12
SLIRP-205ENST00000556310 BAG6P46379 1132 aa15.82■□□□□ 0.12
SLIRP-205ENST00000556310 DEFB132Q7Z7B7 95 aa15.82■□□□□ 0.12
SLIRP-205ENST00000556310 KNSTRNQ9Y448 316 aa15.82■□□□□ 0.12
SLIRP-205ENST00000556310 WASHC2AQ641Q2 1341 aa15.82■□□□□ 0.12
SLIRP-205ENST00000556310 EXOC5O00471 708 aa15.81■□□□□ 0.12
SLIRP-205ENST00000556310 HSP90AB2PQ58FF8 381 aa15.81■□□□□ 0.12
SLIRP-205ENST00000556310 NHSQ6T4R5 1651 aa15.81■□□□□ 0.12
SLIRP-205ENST00000556310 RREB1Q92766 1687 aa15.81■□□□□ 0.12
SLIRP-205ENST00000556310 MEGF6O75095 1541 aa15.8■□□□□ 0.12
SLIRP-205ENST00000556310 TRIM37O94972 964 aa15.8■□□□□ 0.12
SLIRP-205ENST00000556310 MARCH10Q8NA82 808 aaPredicted RBP15.8■□□□□ 0.12
SLIRP-205ENST00000556310 NCAPD2Q15021 1401 aa15.79■□□□□ 0.12
SLIRP-205ENST00000556310 AMER1Q5JTC6 1135 aaPredicted RBP15.79■□□□□ 0.12
SLIRP-205ENST00000556310 POLKQ9UBT6 870 aa15.79■□□□□ 0.12
SLIRP-205ENST00000556310 PARD3Q8TEW0 1356 aa15.78■□□□□ 0.12
SLIRP-205ENST00000556310 PKD1L3Q7Z443 1732 aa15.77■□□□□ 0.12
SLIRP-205ENST00000556310 PPM1GO15355 546 aaPredicted RBP15.77■□□□□ 0.12
SLIRP-205ENST00000556310 TNNT2P45379 298 aaPredicted RBP15.77■□□□□ 0.12
SLIRP-205ENST00000556310 NBPF6Q5VWK0 638 aa15.77■□□□□ 0.12
SLIRP-205ENST00000556310 MORC1Q86VD1 984 aa15.77■□□□□ 0.12
SLIRP-205ENST00000556310 NBPF4Q96M43 638 aa15.77■□□□□ 0.12
SLIRP-205ENST00000556310 NUP188Q5SRE5 1749 aa15.77■□□□□ 0.11
SLIRP-205ENST00000556310 PER1O15534 1290 aaPredicted RBP15.76■□□□□ 0.11
SLIRP-205ENST00000556310 NPC1L1Q9UHC9 1359 aa15.75■□□□□ 0.11
SLIRP-205ENST00000556310 DOT1LQ8TEK3 1739 aa15.75■□□□□ 0.11
SLIRP-205ENST00000556310 APBA3O96018 575 aa15.75■□□□□ 0.11
SLIRP-205ENST00000556310 EN1Q05925 392 aaPredicted RBP15.75■□□□□ 0.11
SLIRP-205ENST00000556310 USHBP1Q8N6Y0 703 aa15.75■□□□□ 0.11
SLIRP-205ENST00000556310 BTAF1O14981 1849 aa15.73■□□□□ 0.11
SLIRP-205ENST00000556310 RAPGEF4Q8WZA2 1011 aa15.73■□□□□ 0.11
SLIRP-205ENST00000556310 CAMKK2Q96RR4 588 aa15.73■□□□□ 0.11
SLIRP-205ENST00000556310 BCL11BQ9C0K0 894 aaPredicted RBP15.73■□□□□ 0.11
SLIRP-205ENST00000556310 EZH2Q15910 746 aaKnown RBP15.72■□□□□ 0.11
SLIRP-205ENST00000556310 KAT6BQ8WYB5 2073 aa15.72■□□□□ 0.11
SLIRP-205ENST00000556310 TATP17735 454 aaPredicted RBP15.71■□□□□ 0.11
SLIRP-205ENST00000556310 EIF4A2Q14240 407 aaKnown RBP15.71■□□□□ 0.11
SLIRP-205ENST00000556310 ZCRB1Q8TBF4 217 aaKnown RBP15.71■□□□□ 0.11
SLIRP-205ENST00000556310 EYA1Q99502 592 aa15.7■□□□□ 0.1
SLIRP-205ENST00000556310 PLEKHG2Q9H7P9 1386 aa15.7■□□□□ 0.1
SLIRP-205ENST00000556310 CC2D1BQ5T0F9 858 aaKnown RBP15.69■□□□□ 0.1
SLIRP-205ENST00000556310 PTF1AQ7RTS3 328 aa15.69■□□□□ 0.1
SLIRP-205ENST00000556310 DDX54Q8TDD1 881 aaKnown RBP15.69■□□□□ 0.1
SLIRP-205ENST00000556310 IGSF1Q8N6C5 1336 aa15.68■□□□□ 0.1
SLIRP-205ENST00000556310 PCDH11XQ9BZA7 1347 aa15.68■□□□□ 0.1
SLIRP-205ENST00000556310 PCDH11YQ9BZA8 1340 aa15.68■□□□□ 0.1
SLIRP-205ENST00000556310 PLSCR1O15162 318 aa15.68■□□□□ 0.1
SLIRP-205ENST00000556310 KCNQ2O43526 872 aa15.67■□□□□ 0.1
SLIRP-205ENST00000556310 ACSBG1Q96GR2 724 aa15.67■□□□□ 0.1
SLIRP-205ENST00000556310 TOGARAM1Q9Y4F4 1720 aa15.67■□□□□ 0.1
SLIRP-205ENST00000556310 ITGB4P16144 1822 aa15.64■□□□□ 0.09
SLIRP-205ENST00000556310 LY75O60449 1722 aa15.64■□□□□ 0.09
SLIRP-205ENST00000556310 MTHFSP49914 203 aa15.64■□□□□ 0.09
SLIRP-205ENST00000556310 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.64■□□□□ 0.09
SLIRP-205ENST00000556310 COL3A1P02461 1466 aaPredicted RBP15.64■□□□□ 0.09
SLIRP-205ENST00000556310 KDRP35968 1356 aa15.63■□□□□ 0.09
SLIRP-205ENST00000556310 SPDYE2BA6NHP3 402 aa15.63■□□□□ 0.09
SLIRP-205ENST00000556310 CYP27B1O15528 508 aa15.63■□□□□ 0.09
SLIRP-205ENST00000556310 SPDYE6P0CI01 402 aa15.63■□□□□ 0.09
SLIRP-205ENST00000556310 SPDYE2Q495Y8 402 aa15.63■□□□□ 0.09
SLIRP-205ENST00000556310 SPG7Q9UQ90 795 aa15.63■□□□□ 0.09
SLIRP-205ENST00000556310 LRP5O75197 1615 aa15.63■□□□□ 0.09
SLIRP-205ENST00000556310 PAPPAQ13219 1627 aa15.63■□□□□ 0.09
SLIRP-205ENST00000556310 SRCAPQ6ZRS2 3230 aa15.62■□□□□ 0.09
SLIRP-205ENST00000556310 IL13P35225 146 aa15.62■□□□□ 0.09
SLIRP-205ENST00000556310 PSDA5PKW4 1024 aaPredicted RBP15.61■□□□□ 0.09
SLIRP-205ENST00000556310 ZEB1P37275 1124 aaPredicted RBP15.61■□□□□ 0.09
SLIRP-205ENST00000556310 PRIM1P49642 420 aaKnown RBP15.6■□□□□ 0.09
SLIRP-205ENST00000556310 CNGB1Q14028 1251 aaPredicted RBP15.6■□□□□ 0.09
SLIRP-205ENST00000556310 R3HDM1Q15032 1099 aaKnown RBP15.6■□□□□ 0.09
SLIRP-205ENST00000556310 TXNRD1Q16881 649 aa15.6■□□□□ 0.09
SLIRP-205ENST00000556310 NBPF14Q5TI25 921 aa15.6■□□□□ 0.09
SLIRP-205ENST00000556310 PROM2Q8N271 834 aa15.6■□□□□ 0.09
SLIRP-205ENST00000556310 SYTL4Q96C24 671 aaPredicted RBP15.6■□□□□ 0.09
SLIRP-205ENST00000556310 NKX1-1Q15270 411 aaPredicted RBP15.59■□□□□ 0.09
SLIRP-205ENST00000556310 AEBP1Q8IUX7 1158 aa15.59■□□□□ 0.09
SLIRP-205ENST00000556310 CASZ1Q86V15 1759 aa15.58■□□□□ 0.08
SLIRP-205ENST00000556310 SULT6B1Q6IMI4 303 aa15.58■□□□□ 0.08
SLIRP-205ENST00000556310 ANO8Q9HCE9 1232 aaPredicted RBP15.58■□□□□ 0.08
SLIRP-205ENST00000556310 DIAPH1O60610 1272 aaKnown RBP15.57■□□□□ 0.08
SLIRP-205ENST00000556310 PHKG2P15735 406 aa15.57■□□□□ 0.08
SLIRP-205ENST00000556310 IFNL2Q8IZJ0 200 aa15.57■□□□□ 0.08
SLIRP-205ENST00000556310 AMOTQ4VCS5 1084 aa15.56■□□□□ 0.08
SLIRP-205ENST00000556310 QSER1Q2KHR3 1735 aa15.56■□□□□ 0.08
SLIRP-205ENST00000556310 VIRMAQ69YN4 1812 aaKnown RBP15.55■□□□□ 0.08
SLIRP-205ENST00000556310 C5P01031 1676 aa15.55■□□□□ 0.08
SLIRP-205ENST00000556310 PLEKHO1Q53GL0 409 aaPredicted RBP15.55■□□□□ 0.08
SLIRP-205ENST00000556310 SCN11AQ9UI33 1791 aa15.54■□□□□ 0.08
SLIRP-205ENST00000556310 PPP2R1AP30153 589 aa15.54■□□□□ 0.08
SLIRP-205ENST00000556310 SLC27A3Q5K4L6 730 aa15.54■□□□□ 0.08
SLIRP-205ENST00000556310 ZNF530Q6P9A1 599 aaPredicted RBP15.54■□□□□ 0.08
SLIRP-205ENST00000556310 CFAP53Q96M91 514 aa15.54■□□□□ 0.08
SLIRP-205ENST00000556310 TAF1LQ8IZX4 1826 aa15.54■□□□□ 0.08
SLIRP-205ENST00000556310 TUBGCP6Q96RT7 1819 aa15.54■□□□□ 0.08
SLIRP-205ENST00000556310 KDM6AO15550 1401 aaPredicted RBP15.53■□□□□ 0.08
SLIRP-205ENST00000556310 HSP90AB1P08238 724 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms