RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 MTHFSP49914 203 aa20.62■□□□□ 0.89
ACTN1-217ENST00000556203 EZH2Q15910 746 aaKnown RBP20.62■□□□□ 0.89
ACTN1-217ENST00000556203 CAMKK2Q96RR4 588 aa20.62■□□□□ 0.89
ACTN1-217ENST00000556203 ACSBG1Q96GR2 724 aa20.61■□□□□ 0.89
ACTN1-217ENST00000556203 KCNQ2O43526 872 aa20.6■□□□□ 0.89
ACTN1-217ENST00000556203 IGSF1Q8N6C5 1336 aa20.59■□□□□ 0.89
ACTN1-217ENST00000556203 PARD3Q8TEW0 1356 aa20.58■□□□□ 0.88
ACTN1-217ENST00000556203 PCDH11XQ9BZA7 1347 aa20.57■□□□□ 0.88
ACTN1-217ENST00000556203 PCDH11YQ9BZA8 1340 aa20.57■□□□□ 0.88
ACTN1-217ENST00000556203 IL13P35225 146 aa20.57■□□□□ 0.88
ACTN1-217ENST00000556203 SBF2Q86WG5 1849 aa20.55■□□□□ 0.88
ACTN1-217ENST00000556203 PLSCR1O15162 318 aa20.55■□□□□ 0.88
ACTN1-217ENST00000556203 SPG7Q9UQ90 795 aa20.54■□□□□ 0.88
ACTN1-217ENST00000556203 SHANK3Q9BYB0 1731 aa20.53■□□□□ 0.88
ACTN1-217ENST00000556203 CYP27B1O15528 508 aa20.53■□□□□ 0.88
ACTN1-217ENST00000556203 AEBP1Q8IUX7 1158 aa20.53■□□□□ 0.88
ACTN1-217ENST00000556203 NHSQ6T4R5 1651 aa20.52■□□□□ 0.88
ACTN1-217ENST00000556203 PRIM1P49642 420 aaKnown RBP20.52■□□□□ 0.88
ACTN1-217ENST00000556203 SULT6B1Q6IMI4 303 aa20.52■□□□□ 0.88
ACTN1-217ENST00000556203 SYTL4Q96C24 671 aaPredicted RBP20.52■□□□□ 0.88
ACTN1-217ENST00000556203 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.52■□□□□ 0.88
ACTN1-217ENST00000556203 DIAPH1O60610 1272 aaKnown RBP20.51■□□□□ 0.87
ACTN1-217ENST00000556203 DDX10Q13206 875 aaKnown RBP20.51■□□□□ 0.87
ACTN1-217ENST00000556203 PPP2R1AP30153 589 aa20.49■□□□□ 0.87
ACTN1-217ENST00000556203 PKD1L3Q7Z443 1732 aa20.49■□□□□ 0.87
ACTN1-217ENST00000556203 PLEKHG2Q9H7P9 1386 aa20.48■□□□□ 0.87
ACTN1-217ENST00000556203 PSDA5PKW4 1024 aaPredicted RBP20.48■□□□□ 0.87
ACTN1-217ENST00000556203 PROM2Q8N271 834 aa20.48■□□□□ 0.87
ACTN1-217ENST00000556203 KDRP35968 1356 aa20.47■□□□□ 0.87
ACTN1-217ENST00000556203 PHKG2P15735 406 aa20.47■□□□□ 0.87
ACTN1-217ENST00000556203 TXNRD1Q16881 649 aa20.47■□□□□ 0.87
ACTN1-217ENST00000556203 PLEKHO1Q53GL0 409 aaPredicted RBP20.47■□□□□ 0.87
ACTN1-217ENST00000556203 IFNL2Q8IZJ0 200 aa20.47■□□□□ 0.87
ACTN1-217ENST00000556203 COL3A1P02461 1466 aaPredicted RBP20.47■□□□□ 0.87
ACTN1-217ENST00000556203 RREB1Q92766 1687 aa20.46■□□□□ 0.87
ACTN1-217ENST00000556203 HMOX1P09601 288 aa20.46■□□□□ 0.87
ACTN1-217ENST00000556203 R3HDM1Q15032 1099 aaKnown RBP20.46■□□□□ 0.87
ACTN1-217ENST00000556203 NKX1-1Q15270 411 aaPredicted RBP20.46■□□□□ 0.87
ACTN1-217ENST00000556203 NBPF14Q5TI25 921 aa20.46■□□□□ 0.87
ACTN1-217ENST00000556203 CFAP53Q96M91 514 aa20.46■□□□□ 0.87
ACTN1-217ENST00000556203 DOT1LQ8TEK3 1739 aa20.46■□□□□ 0.87
ACTN1-217ENST00000556203 RGPD3A6NKT7 1758 aaPredicted RBP20.45■□□□□ 0.86
ACTN1-217ENST00000556203 RGPD4Q7Z3J3 1758 aa20.45■□□□□ 0.86
ACTN1-217ENST00000556203 AMOTQ4VCS5 1084 aa20.45■□□□□ 0.86
ACTN1-217ENST00000556203 U2SURPO15042 1029 aaKnown RBP20.44■□□□□ 0.86
ACTN1-217ENST00000556203 ZNF530Q6P9A1 599 aaPredicted RBP20.44■□□□□ 0.86
ACTN1-217ENST00000556203 NUP188Q5SRE5 1749 aa20.44■□□□□ 0.86
ACTN1-217ENST00000556203 MPRIPQ6WCQ1 1025 aa20.43■□□□□ 0.86
ACTN1-217ENST00000556203 BTAF1O14981 1849 aa20.43■□□□□ 0.86
ACTN1-217ENST00000556203 ANO8Q9HCE9 1232 aaPredicted RBP20.41■□□□□ 0.86
ACTN1-217ENST00000556203 HSP90AB1P08238 724 aaKnown RBP20.4■□□□□ 0.86
ACTN1-217ENST00000556203 KAT6BQ8WYB5 2073 aa20.39■□□□□ 0.86
ACTN1-217ENST00000556203 C1orf141Q5JVX7 400 aa20.39■□□□□ 0.85
ACTN1-217ENST00000556203 NUDCQ9Y266 331 aa20.39■□□□□ 0.85
ACTN1-217ENST00000556203 RALBP1Q15311 655 aa20.38■□□□□ 0.85
ACTN1-217ENST00000556203 SLC27A3Q5K4L6 730 aa20.38■□□□□ 0.85
ACTN1-217ENST00000556203 PIGBQ92521 554 aa20.38■□□□□ 0.85
ACTN1-217ENST00000556203 DCAF5Q96JK2 942 aa20.38■□□□□ 0.85
ACTN1-217ENST00000556203 LRRC4BQ9NT99 713 aa20.38■□□□□ 0.85
ACTN1-217ENST00000556203 TOGARAM1Q9Y4F4 1720 aa20.38■□□□□ 0.85
ACTN1-217ENST00000556203 TMOD3Q9NYL9 352 aa20.37■□□□□ 0.85
ACTN1-217ENST00000556203 KCNQ4P56696 695 aa20.36■□□□□ 0.85
ACTN1-217ENST00000556203 STK32BQ9NY57 414 aa20.36■□□□□ 0.85
ACTN1-217ENST00000556203 KDM6AO15550 1401 aaPredicted RBP20.36■□□□□ 0.85
ACTN1-217ENST00000556203 PALLDQ8WX93 1383 aa20.35■□□□□ 0.85
ACTN1-217ENST00000556203 U2AF1L5P0DN76 240 aaPredicted RBP20.35■□□□□ 0.85
ACTN1-217ENST00000556203 U2AF1Q01081 240 aaKnown RBP eCLIP20.35■□□□□ 0.85
ACTN1-217ENST00000556203 MTHFSDQ2M296 383 aaKnown RBP20.35■□□□□ 0.85
ACTN1-217ENST00000556203 AKAP4Q5JQC9 854 aa20.35■□□□□ 0.85
ACTN1-217ENST00000556203 CCNL1Q9UK58 526 aaPredicted RBP20.35■□□□□ 0.85
ACTN1-217ENST00000556203 ERVV-2B6SEH9 535 aa20.34■□□□□ 0.85
ACTN1-217ENST00000556203 ZNF316A6NFI3 1004 aaPredicted RBP20.33■□□□□ 0.85
ACTN1-217ENST00000556203 SLC15A2Q16348 729 aa20.33■□□□□ 0.85
ACTN1-217ENST00000556203 SMARCC1Q92922 1105 aaPredicted RBP20.33■□□□□ 0.85
ACTN1-217ENST00000556203 PRKAR2BP31323 418 aa20.32■□□□□ 0.84
ACTN1-217ENST00000556203 CABP4P57796 275 aa20.32■□□□□ 0.84
ACTN1-217ENST00000556203 RSPH6AQ9H0K4 717 aa20.32■□□□□ 0.84
ACTN1-217ENST00000556203 ZNF827Q17R98 1081 aa20.31■□□□□ 0.84
ACTN1-217ENST00000556203 ASAP1Q9ULH1 1129 aa20.31■□□□□ 0.84
ACTN1-217ENST00000556203 PAPPAQ13219 1627 aa20.31■□□□□ 0.84
ACTN1-217ENST00000556203 ATG3Q9NT62 314 aa20.3■□□□□ 0.84
ACTN1-217ENST00000556203 MYBBP1AQ9BQG0 1328 aaKnown RBP20.29■□□□□ 0.84
ACTN1-217ENST00000556203 GAS2L2Q8NHY3 880 aa20.29■□□□□ 0.84
ACTN1-217ENST00000556203 AKT1S1Q96B36 256 aa20.29■□□□□ 0.84
ACTN1-217ENST00000556203 ITGB4P16144 1822 aa20.29■□□□□ 0.84
ACTN1-217ENST00000556203 LY75O60449 1722 aa20.28■□□□□ 0.84
ACTN1-217ENST00000556203 FCHSD2O94868 740 aa20.28■□□□□ 0.84
ACTN1-217ENST00000556203 PHACTR3Q96KR7 559 aa20.28■□□□□ 0.84
ACTN1-217ENST00000556203 PDGFDQ9GZP0 370 aaPredicted RBP20.28■□□□□ 0.84
ACTN1-217ENST00000556203 LGR6Q9HBX8 967 aa20.28■□□□□ 0.84
ACTN1-217ENST00000556203 LOC102724428A0A0B4J2F2 783 aa20.27■□□□□ 0.84
ACTN1-217ENST00000556203 RNMTO43148 476 aaKnown RBP20.27■□□□□ 0.84
ACTN1-217ENST00000556203 SIK1P57059 783 aa20.27■□□□□ 0.84
ACTN1-217ENST00000556203 NFATC2IPQ8NCF5 419 aa20.27■□□□□ 0.84
ACTN1-217ENST00000556203 PRKRIP1Q9H875 184 aaPredicted RBP20.26■□□□□ 0.83
ACTN1-217ENST00000556203 MAP3K5Q99683 1374 aa20.25■□□□□ 0.83
ACTN1-217ENST00000556203 SLC52A2Q9HAB3 445 aa20.25■□□□□ 0.83
ACTN1-217ENST00000556203 TFCP2L1Q9NZI6 479 aa20.25■□□□□ 0.83
ACTN1-217ENST00000556203 GNAT3A8MTJ3 354 aa20.23■□□□□ 0.83
ACTN1-217ENST00000556203 HMGB2P26583 209 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms