RNA–Protein interactions for RNA: ENST00000556119.5

ABCD4-224, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-224ENST00000556119 DOT1LQ8TEK3 1739 aa19.28■□□□□ 0.68
ABCD4-224ENST00000556119 TTC21AQ8NDW8 1320 aa19.28■□□□□ 0.68
ABCD4-224ENST00000556119 CCNL1Q9UK58 526 aaPredicted RBP19.28■□□□□ 0.68
ABCD4-224ENST00000556119 NSD2O96028 1365 aa19.28■□□□□ 0.68
ABCD4-224ENST00000556119 TNS4Q8IZW8 715 aa19.27■□□□□ 0.68
ABCD4-224ENST00000556119 ANKRD24Q8TF21 1146 aa19.27■□□□□ 0.68
ABCD4-224ENST00000556119 ANKRD36BQ8N2N9 1353 aa19.27■□□□□ 0.68
ABCD4-224ENST00000556119 IGSF1Q8N6C5 1336 aa19.26■□□□□ 0.67
ABCD4-224ENST00000556119 JMYQ8N9B5 988 aa19.26■□□□□ 0.67
ABCD4-224ENST00000556119 KLRG1Q96E93 195 aa19.25■□□□□ 0.67
ABCD4-224ENST00000556119 HTRA3P83110 453 aa19.24■□□□□ 0.67
ABCD4-224ENST00000556119 C5P01031 1676 aa19.24■□□□□ 0.67
ABCD4-224ENST00000556119 RAB3GAP2Q9H2M9 1393 aa19.23■□□□□ 0.67
ABCD4-224ENST00000556119 TAF1LQ8IZX4 1826 aa19.23■□□□□ 0.67
ABCD4-224ENST00000556119 USP54Q70EL1 1684 aa19.21■□□□□ 0.67
ABCD4-224ENST00000556119 CICQ96RK0 1608 aaPredicted RBP19.21■□□□□ 0.67
ABCD4-224ENST00000556119 EVC2Q86UK5 1308 aa19.21■□□□□ 0.67
ABCD4-224ENST00000556119 KTN1Q86UP2 1357 aaKnown RBP19.2■□□□□ 0.66
ABCD4-224ENST00000556119 MON2Q7Z3U7 1717 aa19.2■□□□□ 0.66
ABCD4-224ENST00000556119 USP31Q70CQ4 1352 aa19.19■□□□□ 0.66
ABCD4-224ENST00000556119 FLAD1Q8NFF5 587 aa19.19■□□□□ 0.66
ABCD4-224ENST00000556119 NMRK2Q9NPI5 230 aa19.19■□□□□ 0.66
ABCD4-224ENST00000556119 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.18■□□□□ 0.66
ABCD4-224ENST00000556119 USP47Q96K76 1375 aa19.18■□□□□ 0.66
ABCD4-224ENST00000556119 AMIGO3Q86WK7 504 aa19.16■□□□□ 0.66
ABCD4-224ENST00000556119 RBM46Q8TBY0 533 aaKnown RBP19.16■□□□□ 0.66
ABCD4-224ENST00000556119 FAM208AQ9UK61 1670 aaKnown RBP19.16■□□□□ 0.66
ABCD4-224ENST00000556119 TOGARAM1Q9Y4F4 1720 aa19.15■□□□□ 0.66
ABCD4-224ENST00000556119 RGPD2P0DJD1 1756 aa19.15■□□□□ 0.66
ABCD4-224ENST00000556119 NME9Q86XW9 330 aa19.15■□□□□ 0.66
ABCD4-224ENST00000556119 ZCRB1Q8TBF4 217 aaKnown RBP19.15■□□□□ 0.66
ABCD4-224ENST00000556119 UBR3Q6ZT12 1888 aa19.14■□□□□ 0.65
ABCD4-224ENST00000556119 LTV1Q96GA3 475 aaPredicted RBP19.13■□□□□ 0.65
ABCD4-224ENST00000556119 N4BP2Q86UW6 1770 aaPredicted RBP19.12■□□□□ 0.65
ABCD4-224ENST00000556119 C4BP0C0L5 1744 aa19.12■□□□□ 0.65
ABCD4-224ENST00000556119 SMIM5Q71RC9 77 aa19.12■□□□□ 0.65
ABCD4-224ENST00000556119 IP6K1Q92551 441 aa19.12■□□□□ 0.65
ABCD4-224ENST00000556119 KIAA1551Q9HCM1 1747 aa19.11■□□□□ 0.65
ABCD4-224ENST00000556119 SLC34A2O95436 690 aa19.11■□□□□ 0.65
ABCD4-224ENST00000556119 KIF13BQ9NQT8 1826 aa19.1■□□□□ 0.65
ABCD4-224ENST00000556119 FSTL1Q12841 308 aa19.1■□□□□ 0.65
ABCD4-224ENST00000556119 SBNO2Q9Y2G9 1366 aa19.09■□□□□ 0.65
ABCD4-224ENST00000556119 MEGF6O75095 1541 aa19.09■□□□□ 0.65
ABCD4-224ENST00000556119 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.07■□□□□ 0.64
ABCD4-224ENST00000556119 PHF14O94880 888 aa19.07■□□□□ 0.64
ABCD4-224ENST00000556119 HMGB2P26583 209 aaKnown RBP19.07■□□□□ 0.64
ABCD4-224ENST00000556119 ARHGAP27Q6ZUM4 889 aa19.07■□□□□ 0.64
ABCD4-224ENST00000556119 C16orf71Q8IYS4 520 aaPredicted RBP19.07■□□□□ 0.64
ABCD4-224ENST00000556119 PXDNLA1KZ92 1463 aa19.07■□□□□ 0.64
ABCD4-224ENST00000556119 CD163L1Q9NR16 1453 aa19.07■□□□□ 0.64
ABCD4-224ENST00000556119 PALLDQ8WX93 1383 aa19.06■□□□□ 0.64
ABCD4-224ENST00000556119 AK7Q96M32 723 aa19.06■□□□□ 0.64
ABCD4-224ENST00000556119 BCS1LQ9Y276 419 aa19.06■□□□□ 0.64
ABCD4-224ENST00000556119 ITGB4P16144 1822 aa19.04■□□□□ 0.64
ABCD4-224ENST00000556119 BRCA1P38398 1863 aaKnown RBP19.04■□□□□ 0.64
ABCD4-224ENST00000556119 A0A0G2JLW4 131 aa19.03■□□□□ 0.64
ABCD4-224ENST00000556119 HSPA1AP0DMV8 641 aaKnown RBP19.03■□□□□ 0.64
ABCD4-224ENST00000556119 HSPA1BP0DMV9 641 aaKnown RBP19.03■□□□□ 0.64
ABCD4-224ENST00000556119 TGFB2P61812 414 aa19.02■□□□□ 0.64
ABCD4-224ENST00000556119 C9orf131Q5VYM1 1079 aa19.02■□□□□ 0.64
ABCD4-224ENST00000556119 MPRIPQ6WCQ1 1025 aa19.02■□□□□ 0.64
ABCD4-224ENST00000556119 PKD1L3Q7Z443 1732 aa19.02■□□□□ 0.63
ABCD4-224ENST00000556119 KCPQ6ZWJ8 1503 aa19.01■□□□□ 0.63
ABCD4-224ENST00000556119 SSFA2P28290 1259 aa19.01■□□□□ 0.63
ABCD4-224ENST00000556119 RRAGCQ9HB90 399 aa19.01■□□□□ 0.63
ABCD4-224ENST00000556119 MAP2P11137 1827 aaKnown RBP19.01■□□□□ 0.63
ABCD4-224ENST00000556119 NSD3Q9BZ95 1437 aa19■□□□□ 0.63
ABCD4-224ENST00000556119 ARFGEF1Q9Y6D6 1849 aa19■□□□□ 0.63
ABCD4-224ENST00000556119 MMP10P09238 476 aa19■□□□□ 0.63
ABCD4-224ENST00000556119 HOXC9P31274 260 aa19■□□□□ 0.63
ABCD4-224ENST00000556119 FBLN1P23142 703 aa18.99■□□□□ 0.63
ABCD4-224ENST00000556119 NBPF6Q5VWK0 638 aa18.99■□□□□ 0.63
ABCD4-224ENST00000556119 NBPF4Q96M43 638 aa18.99■□□□□ 0.63
ABCD4-224ENST00000556119 EDC4Q6P2E9 1401 aaKnown RBP18.99■□□□□ 0.63
ABCD4-224ENST00000556119 MAP3K19Q56UN5 1328 aa18.99■□□□□ 0.63
ABCD4-224ENST00000556119 PLEKHG2Q9H7P9 1386 aa18.98■□□□□ 0.63
ABCD4-224ENST00000556119 FCHSD2O94868 740 aa18.98■□□□□ 0.63
ABCD4-224ENST00000556119 SBF1O95248 1867 aa18.98■□□□□ 0.63
ABCD4-224ENST00000556119 C10orf71Q711Q0 1435 aa18.98■□□□□ 0.63
ABCD4-224ENST00000556119 TNRC6CQ9HCJ0 1690 aaKnown RBP18.98■□□□□ 0.63
ABCD4-224ENST00000556119 CGNL1Q0VF96 1302 aa18.98■□□□□ 0.63
ABCD4-224ENST00000556119 KDM2BQ8NHM5 1336 aa18.98■□□□□ 0.63
ABCD4-224ENST00000556119 DPEP1P16444 411 aa18.97■□□□□ 0.63
ABCD4-224ENST00000556119 LINC00116Q8NCU8 138 aa18.97■□□□□ 0.63
ABCD4-224ENST00000556119 SMARCC1Q92922 1105 aaPredicted RBP18.97■□□□□ 0.63
ABCD4-224ENST00000556119 SLC12A5Q9H2X9 1139 aa18.97■□□□□ 0.63
ABCD4-224ENST00000556119 HDGFL2Q7Z4V5 671 aaPredicted RBP18.96■□□□□ 0.63
ABCD4-224ENST00000556119 USHBP1Q8N6Y0 703 aa18.96■□□□□ 0.63
ABCD4-224ENST00000556119 SMC1BQ8NDV3 1235 aa18.96■□□□□ 0.63
ABCD4-224ENST00000556119 TMC1Q8TDI8 760 aa18.96■□□□□ 0.63
ABCD4-224ENST00000556119 AMPHP49418 695 aa18.95■□□□□ 0.62
ABCD4-224ENST00000556119 KCNA3P22001 575 aa18.94■□□□□ 0.62
ABCD4-224ENST00000556119 RAPGEF4Q8WZA2 1011 aa18.94■□□□□ 0.62
ABCD4-224ENST00000556119 GNPATO15228 680 aa18.93■□□□□ 0.62
ABCD4-224ENST00000556119 CYP27B1O15528 508 aa18.93■□□□□ 0.62
ABCD4-224ENST00000556119 PIGBQ92521 554 aa18.93■□□□□ 0.62
ABCD4-224ENST00000556119 PCDH11XQ9BZA7 1347 aa18.93■□□□□ 0.62
ABCD4-224ENST00000556119 PCDH11YQ9BZA8 1340 aa18.93■□□□□ 0.62
ABCD4-224ENST00000556119 A0A1W2PP64 1363 aa18.93■□□□□ 0.62
ABCD4-224ENST00000556119 LOC102724428A0A0B4J2F2 783 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms