RNA–Protein interactions for RNA: ENST00000555015.5

SRP54-AS1-202, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

TSL 3

Gene SRP54-AS1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-202ENST00000555015 TATP17735 454 aaPredicted RBP17.36■□□□□ 0.37
SRP54-AS1-202ENST00000555015 KDRP35968 1356 aa17.36■□□□□ 0.37
SRP54-AS1-202ENST00000555015 BCL9O00512 1426 aa17.36■□□□□ 0.37
SRP54-AS1-202ENST00000555015 FAM196AQ6ZSG2 479 aa17.35■□□□□ 0.37
SRP54-AS1-202ENST00000555015 ADRA2BP18089 450 aa17.34■□□□□ 0.37
SRP54-AS1-202ENST00000555015 FAM182BQ5T319 152 aa17.34■□□□□ 0.37
SRP54-AS1-202ENST00000555015 NHSQ6T4R5 1651 aa17.34■□□□□ 0.37
SRP54-AS1-202ENST00000555015 MARCH10Q8NA82 808 aaPredicted RBP17.34■□□□□ 0.37
SRP54-AS1-202ENST00000555015 MYBBP1AQ9BQG0 1328 aaKnown RBP17.33■□□□□ 0.36
SRP54-AS1-202ENST00000555015 ZCRB1Q8TBF4 217 aaKnown RBP17.33■□□□□ 0.36
SRP54-AS1-202ENST00000555015 DOT1LQ8TEK3 1739 aa17.33■□□□□ 0.36
SRP54-AS1-202ENST00000555015 CCDC125Q86Z20 511 aa17.32■□□□□ 0.36
SRP54-AS1-202ENST00000555015 PRKRIP1Q9H875 184 aaPredicted RBP17.32■□□□□ 0.36
SRP54-AS1-202ENST00000555015 PCDH11XQ9BZA7 1347 aa17.31■□□□□ 0.36
SRP54-AS1-202ENST00000555015 PCDH11YQ9BZA8 1340 aa17.31■□□□□ 0.36
SRP54-AS1-202ENST00000555015 SULT6B1Q6IMI4 303 aa17.31■□□□□ 0.36
SRP54-AS1-202ENST00000555015 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.31■□□□□ 0.361e-12■□□□□ 8.4
SRP54-AS1-202ENST00000555015 KAT6BQ8WYB5 2073 aa17.31■□□□□ 0.36
SRP54-AS1-202ENST00000555015 AEBP1Q8IUX7 1158 aa17.3■□□□□ 0.36
SRP54-AS1-202ENST00000555015 PIAS4Q8N2W9 510 aaPredicted RBP17.3■□□□□ 0.36
SRP54-AS1-202ENST00000555015 RGPD3A6NKT7 1758 aaPredicted RBP17.3■□□□□ 0.36
SRP54-AS1-202ENST00000555015 RGPD4Q7Z3J3 1758 aa17.3■□□□□ 0.36
SRP54-AS1-202ENST00000555015 SPG7Q9UQ90 795 aa17.29■□□□□ 0.36
SRP54-AS1-202ENST00000555015 NUDCQ9Y266 331 aa17.29■□□□□ 0.36
SRP54-AS1-202ENST00000555015 VIRMAQ69YN4 1812 aaKnown RBP17.28■□□□□ 0.36
SRP54-AS1-202ENST00000555015 TOGARAM1Q9Y4F4 1720 aa17.28■□□□□ 0.36
SRP54-AS1-202ENST00000555015 MSH5O43196 834 aa17.28■□□□□ 0.36
SRP54-AS1-202ENST00000555015 DDX54Q8TDD1 881 aaKnown RBP17.28■□□□□ 0.36
SRP54-AS1-202ENST00000555015 BTAF1O14981 1849 aa17.27■□□□□ 0.36
SRP54-AS1-202ENST00000555015 U2SURPO15042 1029 aaKnown RBP17.27■□□□□ 0.36
SRP54-AS1-202ENST00000555015 ITGB4P16144 1822 aa17.26■□□□□ 0.35
SRP54-AS1-202ENST00000555015 HMOX1P09601 288 aa17.26■□□□□ 0.35
SRP54-AS1-202ENST00000555015 SF3B2Q13435 895 aaKnown RBP17.26■□□□□ 0.35
SRP54-AS1-202ENST00000555015 CYP27B1O15528 508 aa17.25■□□□□ 0.35
SRP54-AS1-202ENST00000555015 TRIM37O94972 964 aa17.25■□□□□ 0.35
SRP54-AS1-202ENST00000555015 AMOTQ4VCS5 1084 aa17.25■□□□□ 0.35
SRP54-AS1-202ENST00000555015 PLEKHO1Q53GL0 409 aaPredicted RBP17.25■□□□□ 0.35
SRP54-AS1-202ENST00000555015 SCN11AQ9UI33 1791 aa17.23■□□□□ 0.35
SRP54-AS1-202ENST00000555015 LRP5O75197 1615 aa17.23■□□□□ 0.35
SRP54-AS1-202ENST00000555015 ANP32CO43423 234 aa17.23■□□□□ 0.35
SRP54-AS1-202ENST00000555015 BCL11BQ9C0K0 894 aaPredicted RBP17.23■□□□□ 0.35
SRP54-AS1-202ENST00000555015 RREB1Q92766 1687 aa17.23■□□□□ 0.35
SRP54-AS1-202ENST00000555015 U2AF1L5P0DN76 240 aaPredicted RBP17.22■□□□□ 0.35
SRP54-AS1-202ENST00000555015 PHKG2P15735 406 aa17.22■□□□□ 0.35
SRP54-AS1-202ENST00000555015 U2AF1Q01081 240 aaKnown RBP eCLIP17.22■□□□□ 0.352e-6■□□□□ 8.5
SRP54-AS1-202ENST00000555015 NKX1-1Q15270 411 aaPredicted RBP17.22■□□□□ 0.35
SRP54-AS1-202ENST00000555015 IFNL2Q8IZJ0 200 aa17.22■□□□□ 0.35
SRP54-AS1-202ENST00000555015 BAG6P46379 1132 aa17.21■□□□□ 0.35
SRP54-AS1-202ENST00000555015 RSPH6AQ9H0K4 717 aa17.21■□□□□ 0.35
SRP54-AS1-202ENST00000555015 ADAMTS7Q9UKP4 1686 aa17.2■□□□□ 0.34
SRP54-AS1-202ENST00000555015 FCHSD2O94868 740 aa17.2■□□□□ 0.34
SRP54-AS1-202ENST00000555015 ZNF530Q6P9A1 599 aaPredicted RBP17.2■□□□□ 0.34
SRP54-AS1-202ENST00000555015 DEFB132Q7Z7B7 95 aa17.2■□□□□ 0.34
SRP54-AS1-202ENST00000555015 ACSBG1Q96GR2 724 aa17.2■□□□□ 0.34
SRP54-AS1-202ENST00000555015 HSP90AB1P08238 724 aaKnown RBP17.19■□□□□ 0.34
SRP54-AS1-202ENST00000555015 LY75O60449 1722 aa17.18■□□□□ 0.34
SRP54-AS1-202ENST00000555015 DLG5Q8TDM6 1919 aa17.18■□□□□ 0.34
SRP54-AS1-202ENST00000555015 KCNQ2O43526 872 aa17.18■□□□□ 0.34
SRP54-AS1-202ENST00000555015 APBA3O96018 575 aa17.18■□□□□ 0.34
SRP54-AS1-202ENST00000555015 PRKAR2BP31323 418 aa17.18■□□□□ 0.34
SRP54-AS1-202ENST00000555015 C1orf141Q5JVX7 400 aa17.18■□□□□ 0.34
SRP54-AS1-202ENST00000555015 NUP188Q5SRE5 1749 aa17.18■□□□□ 0.34
SRP54-AS1-202ENST00000555015 KDM6AO15550 1401 aaPredicted RBP17.17■□□□□ 0.34
SRP54-AS1-202ENST00000555015 PTF1AQ7RTS3 328 aa17.17■□□□□ 0.34
SRP54-AS1-202ENST00000555015 PRIM1P49642 420 aaKnown RBP17.16■□□□□ 0.34
SRP54-AS1-202ENST00000555015 MTHFSDQ2M296 383 aaKnown RBP17.16■□□□□ 0.34
SRP54-AS1-202ENST00000555015 AKAP4Q5JQC9 854 aa17.16■□□□□ 0.34
SRP54-AS1-202ENST00000555015 GAS2L2Q8NHY3 880 aa17.16■□□□□ 0.34
SRP54-AS1-202ENST00000555015 SYTL4Q96C24 671 aaPredicted RBP17.16■□□□□ 0.34
SRP54-AS1-202ENST00000555015 DCAF5Q96JK2 942 aa17.16■□□□□ 0.34
SRP54-AS1-202ENST00000555015 PLSCR1O15162 318 aa17.15■□□□□ 0.34
SRP54-AS1-202ENST00000555015 EN1Q05925 392 aaPredicted RBP17.15■□□□□ 0.34
SRP54-AS1-202ENST00000555015 PNNQ9H307 717 aaKnown RBP17.15■□□□□ 0.34
SRP54-AS1-202ENST00000555015 MRC1P22897 1456 aa17.14■□□□□ 0.33
SRP54-AS1-202ENST00000555015 WDR43Q15061 677 aaKnown RBP eCLIP17.14■□□□□ 0.33
SRP54-AS1-202ENST00000555015 PHACTR3Q96KR7 559 aa17.14■□□□□ 0.33
SRP54-AS1-202ENST00000555015 CAMKK2Q96RR4 588 aa17.14■□□□□ 0.33
SRP54-AS1-202ENST00000555015 SIPA1L3O60292 1781 aaPredicted RBP17.14■□□□□ 0.33
SRP54-AS1-202ENST00000555015 MAP3K5Q99683 1374 aa17.14■□□□□ 0.33
SRP54-AS1-202ENST00000555015 ERVV-2B6SEH9 535 aa17.13■□□□□ 0.33
SRP54-AS1-202ENST00000555015 NEFMP07197 916 aa17.13■□□□□ 0.33
SRP54-AS1-202ENST00000555015 PLEKHF1Q96S99 279 aa17.12■□□□□ 0.33
SRP54-AS1-202ENST00000555015 PAPPAQ13219 1627 aa17.11■□□□□ 0.33
SRP54-AS1-202ENST00000555015 EZH2Q15910 746 aaKnown RBP17.11■□□□□ 0.33
SRP54-AS1-202ENST00000555015 MPRIPQ6WCQ1 1025 aa17.11■□□□□ 0.33
SRP54-AS1-202ENST00000555015 TMOD3Q9NYL9 352 aa17.11■□□□□ 0.33
SRP54-AS1-202ENST00000555015 GNAT3A8MTJ3 354 aa17.1■□□□□ 0.33
SRP54-AS1-202ENST00000555015 MAPK8IP3Q9UPT6 1336 aa17.1■□□□□ 0.33
SRP54-AS1-202ENST00000555015 PIGBQ92521 554 aa17.09■□□□□ 0.33
SRP54-AS1-202ENST00000555015 ZNF831Q5JPB2 1677 aa17.09■□□□□ 0.33
SRP54-AS1-202ENST00000555015 TAF1LQ8IZX4 1826 aa17.09■□□□□ 0.33
SRP54-AS1-202ENST00000555015 C5P01031 1676 aa17.08■□□□□ 0.32
SRP54-AS1-202ENST00000555015 RNMTO43148 476 aaKnown RBP17.08■□□□□ 0.32
SRP54-AS1-202ENST00000555015 CABP4P57796 275 aa17.08■□□□□ 0.32
SRP54-AS1-202ENST00000555015 CCDC184Q52MB2 194 aa17.08■□□□□ 0.32
SRP54-AS1-202ENST00000555015 MRS2Q9HD23 443 aa17.08■□□□□ 0.32
SRP54-AS1-202ENST00000555015 ADAMTS8Q9UP79 889 aa17.08■□□□□ 0.32
SRP54-AS1-202ENST00000555015 PALLDQ8WX93 1383 aa17.07■□□□□ 0.32
SRP54-AS1-202ENST00000555015 UBR2Q8IWV8 1755 aa17.07■□□□□ 0.32
SRP54-AS1-202ENST00000555015 CEMIPQ8WUJ3 1361 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms