RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 LRP2BPQ9P2M1 347 aa8.06□□□□□ -1.12
SYNE2-216ENST00000555002 PLEKHO1Q53GL0 409 aaPredicted RBP8.06□□□□□ -1.12
SYNE2-216ENST00000555002 LUZP1Q86V48 1076 aa8.06□□□□□ -1.12
SYNE2-216ENST00000555002 SPATA24Q86W54 205 aa8.06□□□□□ -1.12
SYNE2-216ENST00000555002 FERP16591 822 aa8.06□□□□□ -1.12
SYNE2-216ENST00000555002 CCDC30Q5VVM6 783 aa8.06□□□□□ -1.12
SYNE2-216ENST00000555002 ANKIB1Q9P2G1 1089 aa8.06□□□□□ -1.12
SYNE2-216ENST00000555002 SH3BP5O60239 455 aa8.05□□□□□ -1.12
SYNE2-216ENST00000555002 AACSQ86V21 672 aa8.05□□□□□ -1.12
SYNE2-216ENST00000555002 FEZ1Q99689 392 aa8.05□□□□□ -1.12
SYNE2-216ENST00000555002 CCDC148Q8NFR7 591 aa8.05□□□□□ -1.12
SYNE2-216ENST00000555002 TMX1Q9H3N1 280 aa8.05□□□□□ -1.12
SYNE2-216ENST00000555002 CCDC192P0DO97 292 aa8.05□□□□□ -1.12
SYNE2-216ENST00000555002 TATP17735 454 aaPredicted RBP8.05□□□□□ -1.12
SYNE2-216ENST00000555002 LMAN1P49257 510 aa8.05□□□□□ -1.12
SYNE2-216ENST00000555002 GIGYF2Q6Y7W6 1299 aaKnown RBP8.05□□□□□ -1.12
SYNE2-216ENST00000555002 CYP46A1Q9Y6A2 500 aa8.05□□□□□ -1.12
SYNE2-216ENST00000555002 PROSER2Q86WR7 435 aaPredicted RBP8.05□□□□□ -1.12
SYNE2-216ENST00000555002 ECM2O94769 699 aaPredicted RBP8.05□□□□□ -1.12
SYNE2-216ENST00000555002 KLHL10Q6JEL2 608 aa8.05□□□□□ -1.12
SYNE2-216ENST00000555002 ZNF397Q8NF99 534 aaPredicted RBP8.05□□□□□ -1.12
SYNE2-216ENST00000555002 CUL5Q93034 780 aa8.05□□□□□ -1.12
SYNE2-216ENST00000555002 TSNARE1Q96NA8 513 aa8.05□□□□□ -1.12
SYNE2-216ENST00000555002 ABCC8Q09428 1581 aa8.04□□□□□ -1.12
SYNE2-216ENST00000555002 CDKL5O76039 1030 aa8.04□□□□□ -1.12
SYNE2-216ENST00000555002 SPA17Q15506 151 aa8.04□□□□□ -1.12
SYNE2-216ENST00000555002 ZFP91Q96JP5 570 aaPredicted RBP8.04□□□□□ -1.12
SYNE2-216ENST00000555002 TSG101Q99816 390 aa8.04□□□□□ -1.12
SYNE2-216ENST00000555002 ANKRD18BA2A2Z9 1011 aa8.04□□□□□ -1.12
SYNE2-216ENST00000555002 RGS22Q8NE09 1264 aa8.04□□□□□ -1.12
SYNE2-216ENST00000555002 FHOD3Q2V2M9 1422 aa8.04□□□□□ -1.12
SYNE2-216ENST00000555002 PPP1R14CQ8TAE6 165 aa8.04□□□□□ -1.12
SYNE2-216ENST00000555002 GGNBP2Q9H3C7 697 aa8.04□□□□□ -1.12
SYNE2-216ENST00000555002 DDX11Q96FC9 970 aa8.04□□□□□ -1.12
SYNE2-216ENST00000555002 ARHGAP29Q52LW3 1261 aa8.03□□□□□ -1.12
SYNE2-216ENST00000555002 ZNF530Q6P9A1 599 aaPredicted RBP8.03□□□□□ -1.12
SYNE2-216ENST00000555002 IGHMBP2P38935 993 aaKnown RBP8.03□□□□□ -1.12
SYNE2-216ENST00000555002 MBD3O95983 291 aa8.03□□□□□ -1.12
SYNE2-216ENST00000555002 CFAP57Q96MR6 1250 aa8.03□□□□□ -1.12
SYNE2-216ENST00000555002 SYNCQ9H7C4 482 aa8.03□□□□□ -1.12
SYNE2-216ENST00000555002 RAB3IL1Q8TBN0 382 aa8.03□□□□□ -1.12
SYNE2-216ENST00000555002 IDH1O75874 414 aaKnown RBP8.03□□□□□ -1.12
SYNE2-216ENST00000555002 GNAI2P04899 355 aa8.03□□□□□ -1.12
SYNE2-216ENST00000555002 FAM69CQ0P6D2 419 aa8.03□□□□□ -1.12
SYNE2-216ENST00000555002 ZPR1O75312 459 aa8.03□□□□□ -1.12
SYNE2-216ENST00000555002 TMCO3Q6UWJ1 677 aa8.03□□□□□ -1.12
SYNE2-216ENST00000555002 GNAI3P08754 354 aa8.02□□□□□ -1.13
SYNE2-216ENST00000555002 XPCQ01831 940 aaPredicted RBP8.02□□□□□ -1.13
SYNE2-216ENST00000555002 BICD1Q96G01 975 aa8.02□□□□□ -1.13
SYNE2-216ENST00000555002 TIGD1Q96MW7 591 aa8.02□□□□□ -1.13
SYNE2-216ENST00000555002 RFX1P22670 979 aa8.02□□□□□ -1.13
SYNE2-216ENST00000555002 VPS36Q86VN1 386 aa8.02□□□□□ -1.13
SYNE2-216ENST00000555002 TDRD9Q8NDG6 1382 aaKnown RBP8.02□□□□□ -1.13
SYNE2-216ENST00000555002 SPATA32Q96LK8 384 aa8.02□□□□□ -1.13
SYNE2-216ENST00000555002 UQCRHLA0A096LP55 91 aa8.02□□□□□ -1.13
SYNE2-216ENST00000555002 UQCRHP07919 91 aa8.02□□□□□ -1.13
SYNE2-216ENST00000555002 CNTLNQ9NXG0 1405 aa8.01□□□□□ -1.13
SYNE2-216ENST00000555002 HDGFL1Q5TGJ6 251 aa8.01□□□□□ -1.13
SYNE2-216ENST00000555002 LARP1BQ659C4 914 aaKnown RBP8.01□□□□□ -1.13
SYNE2-216ENST00000555002 ZSCAN25Q6NSZ9 544 aa8.01□□□□□ -1.13
SYNE2-216ENST00000555002 GAS2L2Q8NHY3 880 aa8.01□□□□□ -1.13
SYNE2-216ENST00000555002 MINDY4BA8MYZ0 360 aa8.01□□□□□ -1.13
SYNE2-216ENST00000555002 MTHFSP49914 203 aa8.01□□□□□ -1.13
SYNE2-216ENST00000555002 MAP3K9P80192 1104 aa8.01□□□□□ -1.13
SYNE2-216ENST00000555002 PRPF4BQ13523 1007 aaKnown RBP8.01□□□□□ -1.13
SYNE2-216ENST00000555002 LRSAM1Q6UWE0 723 aa8.01□□□□□ -1.13
SYNE2-216ENST00000555002 DZIP1Q86YF9 867 aaKnown RBP8.01□□□□□ -1.13
SYNE2-216ENST00000555002 CRACR2AQ9BSW2 395 aa8.01□□□□□ -1.13
SYNE2-216ENST00000555002 ABCF2Q9UG63 623 aa8.01□□□□□ -1.13
SYNE2-216ENST00000555002 AIDAQ96BJ3 306 aa8.01□□□□□ -1.13
SYNE2-216ENST00000555002 JAKMIP1Q96N16 626 aaKnown RBP8.01□□□□□ -1.13
SYNE2-216ENST00000555002 BMS1Q14692 1282 aaKnown RBP8.01□□□□□ -1.13
SYNE2-216ENST00000555002 FKBP15Q5T1M5 1219 aa8.01□□□□□ -1.13
SYNE2-216ENST00000555002 UPF3BQ9BZI7 483 aaKnown RBP8.01□□□□□ -1.13
SYNE2-216ENST00000555002 SLC4A8Q2Y0W8 1093 aa8.01□□□□□ -1.13
SYNE2-216ENST00000555002 CACNA2D4Q7Z3S7 1137 aa8.01□□□□□ -1.13
SYNE2-216ENST00000555002 PDRG1Q9NUG6 133 aa8.01□□□□□ -1.13
SYNE2-216ENST00000555002 CCDC175P0C221 793 aa8.01□□□□□ -1.13
SYNE2-216ENST00000555002 CAMK4Q16566 473 aa8.01□□□□□ -1.13
SYNE2-216ENST00000555002 AEBP1Q8IUX7 1158 aa8.01□□□□□ -1.13
SYNE2-216ENST00000555002 FAM107BQ9H098 131 aa8.01□□□□□ -1.13
SYNE2-216ENST00000555002 EHMT1Q9H9B1 1298 aa8.01□□□□□ -1.13
SYNE2-216ENST00000555002 SOGA1O94964 1423 aa8.01□□□□□ -1.13
SYNE2-216ENST00000555002 MTERF4Q7Z6M4 381 aaKnown RBP8.01□□□□□ -1.13
SYNE2-216ENST00000555002 SHTN1A0MZ66 631 aa8.01□□□□□ -1.13
SYNE2-216ENST00000555002 ANKRD1Q15327 319 aa8.01□□□□□ -1.13
SYNE2-216ENST00000555002 CFAP100Q494V2 611 aa8.01□□□□□ -1.13
SYNE2-216ENST00000555002 GCOM1H8Y6P7 765 aaPredicted RBP8□□□□□ -1.13
SYNE2-216ENST00000555002 MYZAPP0CAP1 466 aa8□□□□□ -1.13
SYNE2-216ENST00000555002 MRE11P49959 708 aa8□□□□□ -1.13
SYNE2-216ENST00000555002 WASF1Q92558 559 aa8□□□□□ -1.13
SYNE2-216ENST00000555002 RPGRQ92834 1020 aaKnown RBP8□□□□□ -1.13
SYNE2-216ENST00000555002 TRAK2O60296 914 aa8□□□□□ -1.13
SYNE2-216ENST00000555002 MMRN2Q9H8L6 949 aa8□□□□□ -1.13
SYNE2-216ENST00000555002 FSD2A1L4K1 749 aa8□□□□□ -1.13
SYNE2-216ENST00000555002 KRT85P78386 507 aa8□□□□□ -1.13
SYNE2-216ENST00000555002 CASQ1P31415 396 aa8□□□□□ -1.13
SYNE2-216ENST00000555002 SYCP3Q8IZU3 236 aa8□□□□□ -1.13
SYNE2-216ENST00000555002 BRPF3Q9ULD4 1205 aa8□□□□□ -1.13
SYNE2-216ENST00000555002 SAMM50Q9Y512 469 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms