RNA–Protein interactions for RNA: ENST00000554511.1

PPP4R3A-203, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 3

Gene PPP4R3A, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-203ENST00000554511 U2AF1L5P0DN76 240 aaPredicted RBP24.27■■□□□ 1.48
PPP4R3A-203ENST00000554511 U2AF1Q01081 240 aaKnown RBP eCLIP24.27■■□□□ 1.48
PPP4R3A-203ENST00000554511 DDB1Q16531 1140 aa24.27■■□□□ 1.48
PPP4R3A-203ENST00000554511 CARD10Q9BWT7 1032 aa24.27■■□□□ 1.48
PPP4R3A-203ENST00000554511 COL3A1P02461 1466 aaPredicted RBP24.26■■□□□ 1.47
PPP4R3A-203ENST00000554511 EYA1Q99502 592 aa24.26■■□□□ 1.47
PPP4R3A-203ENST00000554511 CCDC184Q52MB2 194 aa24.25■■□□□ 1.47
PPP4R3A-203ENST00000554511 NBPF6Q5VWK0 638 aa24.24■■□□□ 1.47
PPP4R3A-203ENST00000554511 PNISRQ8TF01 805 aaKnown RBP24.24■■□□□ 1.47
PPP4R3A-203ENST00000554511 NBPF4Q96M43 638 aa24.24■■□□□ 1.47
PPP4R3A-203ENST00000554511 OVOS2A0A0G2JMS6 1433 aa24.24■■□□□ 1.47
PPP4R3A-203ENST00000554511 RGPD5Q99666 1765 aa24.24■■□□□ 1.47
PPP4R3A-203ENST00000554511 IGSF1Q8N6C5 1336 aa24.23■■□□□ 1.47
PPP4R3A-203ENST00000554511 FCHSD2O94868 740 aa24.22■■□□□ 1.47
PPP4R3A-203ENST00000554511 NEFMP07197 916 aa24.22■■□□□ 1.47
PPP4R3A-203ENST00000554511 SULT6B1Q6IMI4 303 aa24.22■■□□□ 1.47
PPP4R3A-203ENST00000554511 CDCA7Q9BWT1 371 aaPredicted RBP24.22■■□□□ 1.47
PPP4R3A-203ENST00000554511 FAM208AQ9UK61 1670 aaKnown RBP24.21■■□□□ 1.47
PPP4R3A-203ENST00000554511 LRRC37A3O60309 1634 aa24.21■■□□□ 1.47
PPP4R3A-203ENST00000554511 NBPF14Q5TI25 921 aa24.2■■□□□ 1.46
PPP4R3A-203ENST00000554511 RREB1Q92766 1687 aa24.19■■□□□ 1.46
PPP4R3A-203ENST00000554511 RAPGEF4Q8WZA2 1011 aa24.19■■□□□ 1.46
PPP4R3A-203ENST00000554511 FAM9BQ8IZU0 186 aa24.18■■□□□ 1.46
PPP4R3A-203ENST00000554511 MARCH10Q8NA82 808 aaPredicted RBP24.18■■□□□ 1.46
PPP4R3A-203ENST00000554511 ADAMTS8Q9UP79 889 aa24.18■■□□□ 1.46
PPP4R3A-203ENST00000554511 HMOX1P09601 288 aa24.17■■□□□ 1.46
PPP4R3A-203ENST00000554511 USHBP1Q8N6Y0 703 aa24.17■■□□□ 1.46
PPP4R3A-203ENST00000554511 NUP188Q5SRE5 1749 aa24.16■■□□□ 1.46
PPP4R3A-203ENST00000554511 TATP17735 454 aaPredicted RBP24.16■■□□□ 1.46
PPP4R3A-203ENST00000554511 IL2RBP14784 551 aa24.15■■□□□ 1.46
PPP4R3A-203ENST00000554511 BCL11BQ9C0K0 894 aaPredicted RBP24.15■■□□□ 1.46
PPP4R3A-203ENST00000554511 KDRP35968 1356 aa24.15■■□□□ 1.46
PPP4R3A-203ENST00000554511 WNK3Q9BYP7 1800 aa24.14■■□□□ 1.46
PPP4R3A-203ENST00000554511 EXOC5O00471 708 aa24.14■■□□□ 1.45
PPP4R3A-203ENST00000554511 PLSCR1O15162 318 aa24.14■■□□□ 1.45
PPP4R3A-203ENST00000554511 PTF1AQ7RTS3 328 aa24.14■■□□□ 1.45
PPP4R3A-203ENST00000554511 NCAPD2Q15021 1401 aa24.13■■□□□ 1.45
PPP4R3A-203ENST00000554511 RSPH6AQ9H0K4 717 aa24.13■■□□□ 1.45
PPP4R3A-203ENST00000554511 MAPK8IP3Q9UPT6 1336 aa24.12■■□□□ 1.45
PPP4R3A-203ENST00000554511 PRKAR2BP31323 418 aa24.12■■□□□ 1.45
PPP4R3A-203ENST00000554511 AMOTQ4VCS5 1084 aa24.12■■□□□ 1.45
PPP4R3A-203ENST00000554511 AEBP1Q8IUX7 1158 aa24.12■■□□□ 1.45
PPP4R3A-203ENST00000554511 PLEKHG2Q9H7P9 1386 aa24.12■■□□□ 1.45
PPP4R3A-203ENST00000554511 SBF2Q86WG5 1849 aa24.12■■□□□ 1.45
PPP4R3A-203ENST00000554511 BCL9O00512 1426 aa24.11■■□□□ 1.45
PPP4R3A-203ENST00000554511 PLEKHO1Q53GL0 409 aaPredicted RBP24.11■■□□□ 1.45
PPP4R3A-203ENST00000554511 RUNDC1Q96C34 613 aa24.11■■□□□ 1.45
PPP4R3A-203ENST00000554511 SPG7Q9UQ90 795 aa24.1■■□□□ 1.45
PPP4R3A-203ENST00000554511 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.09■■□□□ 1.45
PPP4R3A-203ENST00000554511 RGPD2P0DJD1 1756 aa24.08■■□□□ 1.44
PPP4R3A-203ENST00000554511 GAS2L2Q8NHY3 880 aa24.06■■□□□ 1.44
PPP4R3A-203ENST00000554511 ZCRB1Q8TBF4 217 aaKnown RBP24.06■■□□□ 1.44
PPP4R3A-203ENST00000554511 PLEKHF1Q96S99 279 aa24.06■■□□□ 1.44
PPP4R3A-203ENST00000554511 TNS2Q63HR2 1409 aa24.06■■□□□ 1.44
PPP4R3A-203ENST00000554511 RGPD3A6NKT7 1758 aaPredicted RBP24.06■■□□□ 1.44
PPP4R3A-203ENST00000554511 RGPD4Q7Z3J3 1758 aa24.06■■□□□ 1.44
PPP4R3A-203ENST00000554511 PROM2Q8N271 834 aa24.05■■□□□ 1.44
PPP4R3A-203ENST00000554511 CCDC146Q8IYE0 955 aa24.04■■□□□ 1.44
PPP4R3A-203ENST00000554511 ANO8Q9HCE9 1232 aaPredicted RBP24.03■■□□□ 1.44
PPP4R3A-203ENST00000554511 KCNQ2O43526 872 aa24.02■■□□□ 1.44
PPP4R3A-203ENST00000554511 PHACTR3Q96KR7 559 aa24.02■■□□□ 1.44
PPP4R3A-203ENST00000554511 SPON1Q9HCB6 807 aa24.02■■□□□ 1.44
PPP4R3A-203ENST00000554511 C1orf141Q5JVX7 400 aa24.01■■□□□ 1.43
PPP4R3A-203ENST00000554511 NGEFQ8N5V2 710 aa24.01■■□□□ 1.43
PPP4R3A-203ENST00000554511 MEGF6O75095 1541 aa24■■□□□ 1.43
PPP4R3A-203ENST00000554511 TXNRD1Q16881 649 aa24■■□□□ 1.43
PPP4R3A-203ENST00000554511 NFE2L2Q16236 605 aa23.99■■□□□ 1.43
PPP4R3A-203ENST00000554511 MTHFSDQ2M296 383 aaKnown RBP23.99■■□□□ 1.43
PPP4R3A-203ENST00000554511 ZNF530Q6P9A1 599 aaPredicted RBP23.99■■□□□ 1.43
PPP4R3A-203ENST00000554511 IFNL2Q8IZJ0 200 aa23.99■■□□□ 1.43
PPP4R3A-203ENST00000554511 ACSBG1Q96GR2 724 aa23.99■■□□□ 1.43
PPP4R3A-203ENST00000554511 PCDH11XQ9BZA7 1347 aa23.99■■□□□ 1.43
PPP4R3A-203ENST00000554511 PCDH11YQ9BZA8 1340 aa23.99■■□□□ 1.43
PPP4R3A-203ENST00000554511 HSP90AB1P08238 724 aaKnown RBP23.98■■□□□ 1.43
PPP4R3A-203ENST00000554511 PPP1R1BQ9UD71 204 aaPredicted RBP23.98■■□□□ 1.43
PPP4R3A-203ENST00000554511 APAF1O14727 1248 aa23.97■■□□□ 1.43
PPP4R3A-203ENST00000554511 LMOD3Q0VAK6 560 aa23.97■■□□□ 1.43
PPP4R3A-203ENST00000554511 NCBP3Q53F19 620 aaKnown RBP23.97■■□□□ 1.43
PPP4R3A-203ENST00000554511 AKAP4Q5JQC9 854 aa23.97■■□□□ 1.43
PPP4R3A-203ENST00000554511 DDX54Q8TDD1 881 aaKnown RBP23.97■■□□□ 1.43
PPP4R3A-203ENST00000554511 TMPOP42166 694 aaKnown RBP23.96■■□□□ 1.43
PPP4R3A-203ENST00000554511 RIPK4P57078 832 aa23.96■■□□□ 1.43
PPP4R3A-203ENST00000554511 RTF1Q92541 710 aaKnown RBP23.96■■□□□ 1.43
PPP4R3A-203ENST00000554511 GNAT3A8MTJ3 354 aa23.95■■□□□ 1.42
PPP4R3A-203ENST00000554511 HTATSF1O43719 755 aaKnown RBP23.95■■□□□ 1.42
PPP4R3A-203ENST00000554511 PDGFDQ9GZP0 370 aaPredicted RBP23.95■■□□□ 1.42
PPP4R3A-203ENST00000554511 STK32BQ9NY57 414 aa23.94■■□□□ 1.42
PPP4R3A-203ENST00000554511 NHSQ6T4R5 1651 aa23.93■■□□□ 1.42
PPP4R3A-203ENST00000554511 PHKG2P15735 406 aa23.93■■□□□ 1.42
PPP4R3A-203ENST00000554511 NEUROD2Q15784 382 aa23.93■■□□□ 1.42
PPP4R3A-203ENST00000554511 SLC15A2Q16348 729 aa23.92■■□□□ 1.42
PPP4R3A-203ENST00000554511 CYP27B1O15528 508 aa23.9■■□□□ 1.42
PPP4R3A-203ENST00000554511 ZBTB7AO95365 584 aa23.9■■□□□ 1.42
PPP4R3A-203ENST00000554511 DCAF5Q96JK2 942 aa23.9■■□□□ 1.42
PPP4R3A-203ENST00000554511 RRP7AQ9Y3A4 280 aaKnown RBP23.9■■□□□ 1.42
PPP4R3A-203ENST00000554511 CASZ1Q86V15 1759 aa23.9■■□□□ 1.42
PPP4R3A-203ENST00000554511 PKD1L3Q7Z443 1732 aa23.9■■□□□ 1.42
PPP4R3A-203ENST00000554511 MAP3K5Q99683 1374 aa23.9■■□□□ 1.42
PPP4R3A-203ENST00000554511 NKX1-1Q15270 411 aaPredicted RBP23.89■■□□□ 1.41
PPP4R3A-203ENST00000554511 CCDC27Q2M243 656 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms