RNA–Protein interactions for RNA: ENST00000554292.1

PCNX1-206, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 402 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-206ENST00000554292 KAT6BQ8WYB5 2073 aa38.37■■■■□ 3.73
PCNX1-206ENST00000554292 PLEKHG2Q9H7P9 1386 aa38.36■■■■□ 3.73
PCNX1-206ENST00000554292 DDX54Q8TDD1 881 aaKnown RBP38.34■■■■□ 3.73
PCNX1-206ENST00000554292 IL13P35225 146 aa38.33■■■■□ 3.73
PCNX1-206ENST00000554292 PCDH11XQ9BZA7 1347 aa38.32■■■■□ 3.72
PCNX1-206ENST00000554292 PCDH11YQ9BZA8 1340 aa38.32■■■■□ 3.72
PCNX1-206ENST00000554292 NHSQ6T4R5 1651 aa38.31■■■■□ 3.72
PCNX1-206ENST00000554292 CFAP53Q96M91 514 aa38.31■■■■□ 3.72
PCNX1-206ENST00000554292 PARD3Q8TEW0 1356 aa38.31■■■■□ 3.72
PCNX1-206ENST00000554292 DIAPH1O60610 1272 aaKnown RBP38.3■■■■□ 3.72
PCNX1-206ENST00000554292 PPP2R1AP30153 589 aa38.3■■■■□ 3.72
PCNX1-206ENST00000554292 DEFB132Q7Z7B7 95 aa38.29■■■■□ 3.72
PCNX1-206ENST00000554292 SPG7Q9UQ90 795 aa38.29■■■■□ 3.72
PCNX1-206ENST00000554292 COL3A1P02461 1466 aaPredicted RBP38.28■■■■□ 3.72
PCNX1-206ENST00000554292 ZNF316A6NFI3 1004 aaPredicted RBP38.28■■■■□ 3.72
PCNX1-206ENST00000554292 APBA3O96018 575 aa38.28■■■■□ 3.72
PCNX1-206ENST00000554292 BCL11BQ9C0K0 894 aaPredicted RBP38.28■■■■□ 3.72
PCNX1-206ENST00000554292 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP38.28■■■■□ 3.72
PCNX1-206ENST00000554292 KDRP35968 1356 aa38.24■■■■□ 3.71
PCNX1-206ENST00000554292 RGPD3A6NKT7 1758 aaPredicted RBP38.24■■■■□ 3.71
PCNX1-206ENST00000554292 RGPD4Q7Z3J3 1758 aa38.24■■■■□ 3.71
PCNX1-206ENST00000554292 DOT1LQ8TEK3 1739 aa38.24■■■■□ 3.71
PCNX1-206ENST00000554292 SULT6B1Q6IMI4 303 aa38.23■■■■□ 3.71
PCNX1-206ENST00000554292 RALBP1Q15311 655 aa38.22■■■■□ 3.71
PCNX1-206ENST00000554292 EN1Q05925 392 aaPredicted RBP38.21■■■■□ 3.71
PCNX1-206ENST00000554292 ACSBG1Q96GR2 724 aa38.2■■■■□ 3.71
PCNX1-206ENST00000554292 AEBP1Q8IUX7 1158 aa38.19■■■■□ 3.7
PCNX1-206ENST00000554292 BTAF1O14981 1849 aa38.17■■■■□ 3.7
PCNX1-206ENST00000554292 PLEKHO1Q53GL0 409 aaPredicted RBP38.17■■■■□ 3.7
PCNX1-206ENST00000554292 CYP27B1O15528 508 aa38.16■■■■□ 3.7
PCNX1-206ENST00000554292 AMOTQ4VCS5 1084 aa38.16■■■■□ 3.7
PCNX1-206ENST00000554292 NUDCQ9Y266 331 aa38.15■■■■□ 3.7
PCNX1-206ENST00000554292 U2SURPO15042 1029 aaKnown RBP38.14■■■■□ 3.7
PCNX1-206ENST00000554292 KCNQ2O43526 872 aa38.14■■■■□ 3.7
PCNX1-206ENST00000554292 CAMKK2Q96RR4 588 aa38.14■■■■□ 3.7
PCNX1-206ENST00000554292 RREB1Q92766 1687 aa38.14■■■■□ 3.7
PCNX1-206ENST00000554292 PLSCR1O15162 318 aa38.13■■■■□ 3.69
PCNX1-206ENST00000554292 IFNL2Q8IZJ0 200 aa38.13■■■■□ 3.69
PCNX1-206ENST00000554292 EZH2Q15910 746 aaKnown RBP38.12■■■■□ 3.69
PCNX1-206ENST00000554292 PTF1AQ7RTS3 328 aa38.12■■■■□ 3.69
PCNX1-206ENST00000554292 HMOX1P09601 288 aa38.11■■■■□ 3.69
PCNX1-206ENST00000554292 NKX1-1Q15270 411 aaPredicted RBP38.09■■■■□ 3.69
PCNX1-206ENST00000554292 SYTL4Q96C24 671 aaPredicted RBP38.09■■■■□ 3.69
PCNX1-206ENST00000554292 PHKG2P15735 406 aa38.08■■■■□ 3.69
PCNX1-206ENST00000554292 PRIM1P49642 420 aaKnown RBP38.07■■■■□ 3.68
PCNX1-206ENST00000554292 TOGARAM1Q9Y4F4 1720 aa38.07■■■■□ 3.68
PCNX1-206ENST00000554292 ITGB4P16144 1822 aa38.06■■■■□ 3.68
PCNX1-206ENST00000554292 ZNF530Q6P9A1 599 aaPredicted RBP38.06■■■■□ 3.68
PCNX1-206ENST00000554292 NUP188Q5SRE5 1749 aa38.06■■■■□ 3.68
PCNX1-206ENST00000554292 MYBBP1AQ9BQG0 1328 aaKnown RBP38.06■■■■□ 3.68
PCNX1-206ENST00000554292 HSP90AB1P08238 724 aaKnown RBP38.05■■■■□ 3.68
PCNX1-206ENST00000554292 C1orf141Q5JVX7 400 aa38.04■■■■□ 3.68
PCNX1-206ENST00000554292 U2AF1L5P0DN76 240 aaPredicted RBP37.99■■■■□ 3.67
PCNX1-206ENST00000554292 U2AF1Q01081 240 aaKnown RBP eCLIP37.99■■■■□ 3.67
PCNX1-206ENST00000554292 PRKRIP1Q9H875 184 aaPredicted RBP37.99■■■■□ 3.67
PCNX1-206ENST00000554292 DCAF5Q96JK2 942 aa37.97■■■■□ 3.67
PCNX1-206ENST00000554292 TXNRD1Q16881 649 aa37.94■■■■□ 3.66
PCNX1-206ENST00000554292 AKAP4Q5JQC9 854 aa37.93■■■■□ 3.66
PCNX1-206ENST00000554292 MPRIPQ6WCQ1 1025 aa37.93■■■■□ 3.66
PCNX1-206ENST00000554292 LY75O60449 1722 aa37.92■■■■□ 3.66
PCNX1-206ENST00000554292 FCHSD2O94868 740 aa37.92■■■■□ 3.66
PCNX1-206ENST00000554292 NBPF14Q5TI25 921 aa37.92■■■■□ 3.66
PCNX1-206ENST00000554292 RSPH6AQ9H0K4 717 aa37.92■■■■□ 3.66
PCNX1-206ENST00000554292 SCN11AQ9UI33 1791 aa37.92■■■■□ 3.66
PCNX1-206ENST00000554292 TMOD3Q9NYL9 352 aa37.91■■■■□ 3.66
PCNX1-206ENST00000554292 VIRMAQ69YN4 1812 aaKnown RBP37.91■■■■□ 3.66
PCNX1-206ENST00000554292 ERVV-2B6SEH9 535 aa37.9■■■■□ 3.66
PCNX1-206ENST00000554292 PRKAR2BP31323 418 aa37.9■■■■□ 3.66
PCNX1-206ENST00000554292 KDM6AO15550 1401 aaPredicted RBP37.89■■■■□ 3.66
PCNX1-206ENST00000554292 GAS2L2Q8NHY3 880 aa37.89■■■■□ 3.66
PCNX1-206ENST00000554292 MTHFSDQ2M296 383 aaKnown RBP37.88■■■■□ 3.65
PCNX1-206ENST00000554292 PROM2Q8N271 834 aa37.88■■■■□ 3.65
PCNX1-206ENST00000554292 SMARCC1Q92922 1105 aaPredicted RBP37.87■■■■□ 3.65
PCNX1-206ENST00000554292 SLC27A3Q5K4L6 730 aa37.86■■■■□ 3.65
PCNX1-206ENST00000554292 PIGBQ92521 554 aa37.85■■■■□ 3.65
PCNX1-206ENST00000554292 NEFMP07197 916 aa37.84■■■■□ 3.65
PCNX1-206ENST00000554292 PNNQ9H307 717 aaKnown RBP37.83■■■■□ 3.65
PCNX1-206ENST00000554292 PALLDQ8WX93 1383 aa37.82■■■■□ 3.65
PCNX1-206ENST00000554292 CABP4P57796 275 aa37.82■■■■□ 3.64
PCNX1-206ENST00000554292 ADAMTS7Q9UKP4 1686 aa37.81■■■■□ 3.64
PCNX1-206ENST00000554292 MAP3K5Q99683 1374 aa37.8■■■■□ 3.64
PCNX1-206ENST00000554292 HMGB2P26583 209 aaKnown RBP37.79■■■■□ 3.64
PCNX1-206ENST00000554292 PAPPAQ13219 1627 aa37.79■■■■□ 3.64
PCNX1-206ENST00000554292 ANP32CO43423 234 aa37.78■■■■□ 3.64
PCNX1-206ENST00000554292 R3HDM1Q15032 1099 aaKnown RBP37.78■■■■□ 3.64
PCNX1-206ENST00000554292 PHACTR3Q96KR7 559 aa37.78■■■■□ 3.64
PCNX1-206ENST00000554292 CCNL1Q9UK58 526 aaPredicted RBP37.77■■■■□ 3.64
PCNX1-206ENST00000554292 PSDA5PKW4 1024 aaPredicted RBP37.76■■■■□ 3.64
PCNX1-206ENST00000554292 GNAT3A8MTJ3 354 aa37.76■■■■□ 3.64
PCNX1-206ENST00000554292 STK32BQ9NY57 414 aa37.76■■■■□ 3.64
PCNX1-206ENST00000554292 MRC1P22897 1456 aa37.76■■■■□ 3.63
PCNX1-206ENST00000554292 RNMTO43148 476 aaKnown RBP37.75■■■■□ 3.63
PCNX1-206ENST00000554292 LRRC4BQ9NT99 713 aa37.74■■■■□ 3.63
PCNX1-206ENST00000554292 WDR43Q15061 677 aaKnown RBP eCLIP37.73■■■■□ 3.63
PCNX1-206ENST00000554292 ANO8Q9HCE9 1232 aaPredicted RBP37.73■■■■□ 3.63
PCNX1-206ENST00000554292 C5P01031 1676 aa37.72■■■■□ 3.63
PCNX1-206ENST00000554292 TAF1LQ8IZX4 1826 aa37.71■■■■□ 3.63
PCNX1-206ENST00000554292 MAPK8IP3Q9UPT6 1336 aa37.71■■■■□ 3.63
PCNX1-206ENST00000554292 SLC52A2Q9HAB3 445 aa37.71■■■■□ 3.63
PCNX1-206ENST00000554292 LGR6Q9HBX8 967 aa37.71■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms