RNA–Protein interactions for RNA: ENST00000553745.5

ABCD4-219, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-219ENST00000553745 PKD1L3Q7Z443 1732 aa18.35■□□□□ 0.53
ABCD4-219ENST00000553745 RCAN3Q9UKA8 241 aa18.35■□□□□ 0.53
ABCD4-219ENST00000553745 RBM19Q9Y4C8 960 aaKnown RBP18.35■□□□□ 0.53
ABCD4-219ENST00000553745 WNK3Q9BYP7 1800 aa18.35■□□□□ 0.53
ABCD4-219ENST00000553745 RRP1P56182 461 aaKnown RBP18.35■□□□□ 0.53
ABCD4-219ENST00000553745 LRRC37A3O60309 1634 aa18.34■□□□□ 0.53
ABCD4-219ENST00000553745 TOM1L2Q6ZVM7 507 aa18.34■□□□□ 0.53
ABCD4-219ENST00000553745 WDR63Q8IWG1 891 aa18.34■□□□□ 0.53
ABCD4-219ENST00000553745 GAS2L2Q8NHY3 880 aa18.34■□□□□ 0.53
ABCD4-219ENST00000553745 SLFN5Q08AF3 891 aa18.33■□□□□ 0.53
ABCD4-219ENST00000553745 LARP1Q6PKG0 1096 aaKnown RBP18.33■□□□□ 0.53
ABCD4-219ENST00000553745 LMOD3Q0VAK6 560 aa18.32■□□□□ 0.52
ABCD4-219ENST00000553745 SPATA31A6Q5VVP1 1343 aa18.32■□□□□ 0.52
ABCD4-219ENST00000553745 CRB1P82279 1406 aa18.32■□□□□ 0.52
ABCD4-219ENST00000553745 SLIT2O94813 1529 aa18.32■□□□□ 0.52
ABCD4-219ENST00000553745 EVA1CP58658 441 aa18.32■□□□□ 0.52
ABCD4-219ENST00000553745 DUSP27Q5VZP5 1158 aa18.32■□□□□ 0.52
ABCD4-219ENST00000553745 THUMPD2Q9BTF0 503 aaKnown RBP18.32■□□□□ 0.52
ABCD4-219ENST00000553745 E9PSI1 815 aa18.31■□□□□ 0.52
ABCD4-219ENST00000553745 SHANK3Q9BYB0 1731 aa18.31■□□□□ 0.52
ABCD4-219ENST00000553745 DCTN1Q14203 1278 aa18.3■□□□□ 0.52
ABCD4-219ENST00000553745 RAPGEF4Q8WZA2 1011 aa18.3■□□□□ 0.52
ABCD4-219ENST00000553745 MAP3K5Q99683 1374 aa18.3■□□□□ 0.52
ABCD4-219ENST00000553745 TRMT2AQ8IZ69 625 aaKnown RBP18.3■□□□□ 0.52
ABCD4-219ENST00000553745 CARD10Q9BWT7 1032 aa18.3■□□□□ 0.52
ABCD4-219ENST00000553745 OVOS2A0A0G2JMS6 1433 aa18.28■□□□□ 0.52
ABCD4-219ENST00000553745 PLEKHG2Q9H7P9 1386 aa18.28■□□□□ 0.52
ABCD4-219ENST00000553745 TATP17735 454 aaPredicted RBP18.28■□□□□ 0.52
ABCD4-219ENST00000553745 IL16Q14005 1332 aa18.28■□□□□ 0.52
ABCD4-219ENST00000553745 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.27■□□□□ 0.52
ABCD4-219ENST00000553745 AMOTQ4VCS5 1084 aa18.27■□□□□ 0.52
ABCD4-219ENST00000553745 PLEKHO1Q53GL0 409 aaPredicted RBP18.27■□□□□ 0.52
ABCD4-219ENST00000553745 MCM10Q7L590 875 aa18.27■□□□□ 0.52
ABCD4-219ENST00000553745 GNAT3A8MTJ3 354 aa18.27■□□□□ 0.51
ABCD4-219ENST00000553745 ZNF530Q6P9A1 599 aaPredicted RBP18.27■□□□□ 0.51
ABCD4-219ENST00000553745 ADAMTS7Q9UKP4 1686 aa18.26■□□□□ 0.51
ABCD4-219ENST00000553745 C8orf37Q96NL8 207 aa18.26■□□□□ 0.51
ABCD4-219ENST00000553745 USP35Q9P2H5 1018 aa18.26■□□□□ 0.51
ABCD4-219ENST00000553745 RTF1Q92541 710 aaKnown RBP18.25■□□□□ 0.51
ABCD4-219ENST00000553745 TSR2Q969E8 191 aaKnown RBP18.25■□□□□ 0.51
ABCD4-219ENST00000553745 SCN11AQ9UI33 1791 aa18.25■□□□□ 0.51
ABCD4-219ENST00000553745 FANCIQ9NVI1 1328 aa18.25■□□□□ 0.51
ABCD4-219ENST00000553745 CALD1Q05682 793 aaKnown RBP18.25■□□□□ 0.51
ABCD4-219ENST00000553745 CCDC136Q96JN2 1154 aa18.25■□□□□ 0.51
ABCD4-219ENST00000553745 MYH16Q9H6N6 1097 aa18.25■□□□□ 0.51
ABCD4-219ENST00000553745 AKAP4Q5JQC9 854 aa18.24■□□□□ 0.51
ABCD4-219ENST00000553745 DISP2A7MBM2 1401 aa18.23■□□□□ 0.51
ABCD4-219ENST00000553745 HTATSF1O43719 755 aaKnown RBP18.23■□□□□ 0.51
ABCD4-219ENST00000553745 IL2RBP14784 551 aa18.23■□□□□ 0.51
ABCD4-219ENST00000553745 BCL9LQ86UU0 1499 aa18.23■□□□□ 0.51
ABCD4-219ENST00000553745 SIPA1L3O60292 1781 aaPredicted RBP18.22■□□□□ 0.51
ABCD4-219ENST00000553745 C1orf141Q5JVX7 400 aa18.22■□□□□ 0.51
ABCD4-219ENST00000553745 EXOC6Q8TAG9 804 aa18.22■□□□□ 0.51
ABCD4-219ENST00000553745 IFT57Q9NWB7 429 aa18.22■□□□□ 0.51
ABCD4-219ENST00000553745 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.22■□□□□ 0.51
ABCD4-219ENST00000553745 LAS1LQ9Y4W2 734 aaKnown RBP18.22■□□□□ 0.51
ABCD4-219ENST00000553745 CEMIPQ8WUJ3 1361 aa18.22■□□□□ 0.51
ABCD4-219ENST00000553745 NGLY1Q96IV0 654 aa18.22■□□□□ 0.51
ABCD4-219ENST00000553745 SPG7Q9UQ90 795 aa18.22■□□□□ 0.51
ABCD4-219ENST00000553745 GNAI1P63096 354 aa18.21■□□□□ 0.51
ABCD4-219ENST00000553745 IL17REQ8NFR9 667 aa18.21■□□□□ 0.51
ABCD4-219ENST00000553745 ZNF853P0CG23 659 aa18.2■□□□□ 0.5
ABCD4-219ENST00000553745 CFAP44Q96MT7 982 aa18.2■□□□□ 0.5
ABCD4-219ENST00000553745 SPATA31A1Q5TZJ5 1347 aa18.2■□□□□ 0.5
ABCD4-219ENST00000553745 KDM6AO15550 1401 aaPredicted RBP18.19■□□□□ 0.5
ABCD4-219ENST00000553745 MEX3CQ5U5Q3 659 aaKnown RBP18.19■□□□□ 0.5
ABCD4-219ENST00000553745 UNC5CLQ8IV45 518 aa18.19■□□□□ 0.5
ABCD4-219ENST00000553745 KDM3BQ7LBC6 1761 aa18.19■□□□□ 0.5
ABCD4-219ENST00000553745 PHKG2P15735 406 aa18.19■□□□□ 0.5
ABCD4-219ENST00000553745 MPRIPQ6WCQ1 1025 aa18.19■□□□□ 0.5
ABCD4-219ENST00000553745 FNBP4Q8N3X1 1017 aaPredicted RBP18.19■□□□□ 0.5
ABCD4-219ENST00000553745 MBIPQ9NS73 344 aa18.19■□□□□ 0.5
ABCD4-219ENST00000553745 SPATA31A5Q5VU36 1347 aa18.19■□□□□ 0.5
ABCD4-219ENST00000553745 SPATA31A7Q8IWB4 1347 aa18.19■□□□□ 0.5
ABCD4-219ENST00000553745 CYP27B1O15528 508 aa18.18■□□□□ 0.5
ABCD4-219ENST00000553745 LGR6Q9HBX8 967 aa18.18■□□□□ 0.5
ABCD4-219ENST00000553745 PCDH11XQ9BZA7 1347 aa18.18■□□□□ 0.5
ABCD4-219ENST00000553745 PCDH11YQ9BZA8 1340 aa18.18■□□□□ 0.5
ABCD4-219ENST00000553745 IFNL2Q8IZJ0 200 aa18.17■□□□□ 0.5
ABCD4-219ENST00000553745 ZCRB1Q8TBF4 217 aaKnown RBP18.17■□□□□ 0.5
ABCD4-219ENST00000553745 TOGARAM1Q9Y4F4 1720 aa18.17■□□□□ 0.5
ABCD4-219ENST00000553745 RNMTO43148 476 aaKnown RBP18.17■□□□□ 0.5
ABCD4-219ENST00000553745 EXOSC9Q06265 439 aaKnown RBP18.17■□□□□ 0.5
ABCD4-219ENST00000553745 CCDC9Q9Y3X0 531 aaKnown RBP18.16■□□□□ 0.5
ABCD4-219ENST00000553745 TNS2Q63HR2 1409 aa18.16■□□□□ 0.5
ABCD4-219ENST00000553745 MRC1P22897 1456 aa18.16■□□□□ 0.5
ABCD4-219ENST00000553745 CHL1O00533 1208 aa18.15■□□□□ 0.5
ABCD4-219ENST00000553745 USP21Q9UK80 565 aa18.15■□□□□ 0.5
ABCD4-219ENST00000553745 THRAP3Q9Y2W1 955 aaKnown RBP18.15■□□□□ 0.5
ABCD4-219ENST00000553745 PLIN1O60240 522 aa18.14■□□□□ 0.5
ABCD4-219ENST00000553745 VPS72Q15906 364 aa18.14■□□□□ 0.5
ABCD4-219ENST00000553745 AFF2P51816 1311 aa18.14■□□□□ 0.5
ABCD4-219ENST00000553745 MIS18AQ9NYP9 233 aa18.14■□□□□ 0.49
ABCD4-219ENST00000553745 GLI3P10071 1580 aa18.14■□□□□ 0.49
ABCD4-219ENST00000553745 TSPYL4Q9UJ04 414 aa18.13■□□□□ 0.49
ABCD4-219ENST00000553745 TEFQ10587 303 aa18.12■□□□□ 0.49
ABCD4-219ENST00000553745 TAF7Q15545 349 aaPredicted RBP18.12■□□□□ 0.49
ABCD4-219ENST00000553745 DDX54Q8TDD1 881 aaKnown RBP18.12■□□□□ 0.49
ABCD4-219ENST00000553745 THSD7AQ9UPZ6 1657 aa18.11■□□□□ 0.49
ABCD4-219ENST00000553745 HSP90AB1P08238 724 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms