RNA–Protein interactions for RNA: ENST00000553699.5

GSKIP-202, Transcript of GSK3B interacting protein, humanhuman

TSL 4

Gene GSKIP, Length 501 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSKIP-202ENST00000553699 FAM208AQ9UK61 1670 aaKnown RBP13.35□□□□□ -0.27
GSKIP-202ENST00000553699 YBX3P16989 372 aaKnown RBP eCLIP13.35□□□□□ -0.27
GSKIP-202ENST00000553699 KIF20BQ96Q89 1820 aa13.34□□□□□ -0.27
GSKIP-202ENST00000553699 TOMM70O94826 608 aa13.34□□□□□ -0.27
GSKIP-202ENST00000553699 TNS2Q63HR2 1409 aa13.33□□□□□ -0.28
GSKIP-202ENST00000553699 FAM161AQ3B820 660 aa13.33□□□□□ -0.28
GSKIP-202ENST00000553699 ANKRD24Q8TF21 1146 aa13.33□□□□□ -0.28
GSKIP-202ENST00000553699 ADCY9O60503 1353 aa13.32□□□□□ -0.28
GSKIP-202ENST00000553699 EIF4G2P78344 907 aaKnown RBP eCLIP13.32□□□□□ -0.28
GSKIP-202ENST00000553699 IP6K1Q92551 441 aa13.32□□□□□ -0.28
GSKIP-202ENST00000553699 NLRP2Q9NX02 1062 aa13.32□□□□□ -0.28
GSKIP-202ENST00000553699 RTL1A6NKG5 1358 aa13.32□□□□□ -0.28
GSKIP-202ENST00000553699 BCL9O00512 1426 aa13.31□□□□□ -0.28
GSKIP-202ENST00000553699 NSD3Q9BZ95 1437 aa13.31□□□□□ -0.28
GSKIP-202ENST00000553699 FYB1O15117 783 aa13.31□□□□□ -0.28
GSKIP-202ENST00000553699 MAP3K19Q56UN5 1328 aa13.31□□□□□ -0.28
GSKIP-202ENST00000553699 RGPD3A6NKT7 1758 aaPredicted RBP13.3□□□□□ -0.28
GSKIP-202ENST00000553699 RGPD4Q7Z3J3 1758 aa13.3□□□□□ -0.28
GSKIP-202ENST00000553699 NLGN2Q8NFZ4 835 aa13.3□□□□□ -0.28
GSKIP-202ENST00000553699 GGNBP2Q9H3C7 697 aa13.3□□□□□ -0.28
GSKIP-202ENST00000553699 EXOC5O00471 708 aa13.29□□□□□ -0.28
GSKIP-202ENST00000553699 IL2RBP14784 551 aa13.29□□□□□ -0.28
GSKIP-202ENST00000553699 POLD1P28340 1107 aa13.29□□□□□ -0.28
GSKIP-202ENST00000553699 AMPHP49418 695 aa13.29□□□□□ -0.28
GSKIP-202ENST00000553699 HTRA3P83110 453 aa13.29□□□□□ -0.28
GSKIP-202ENST00000553699 MARCH10Q8NA82 808 aaPredicted RBP13.29□□□□□ -0.28
GSKIP-202ENST00000553699 SBF2Q86WG5 1849 aa13.29□□□□□ -0.28
GSKIP-202ENST00000553699 HSPA1AP0DMV8 641 aaKnown RBP13.28□□□□□ -0.28
GSKIP-202ENST00000553699 HSPA1BP0DMV9 641 aaKnown RBP13.28□□□□□ -0.28
GSKIP-202ENST00000553699 HSPA5P11021 654 aaKnown RBP13.28□□□□□ -0.28
GSKIP-202ENST00000553699 HOXC9P31274 260 aa13.28□□□□□ -0.28
GSKIP-202ENST00000553699 TXNRD1Q16881 649 aa13.28□□□□□ -0.28
GSKIP-202ENST00000553699 SMG6Q86US8 1419 aaKnown RBP13.28□□□□□ -0.28
GSKIP-202ENST00000553699 LTV1Q96GA3 475 aaPredicted RBP13.27□□□□□ -0.29
GSKIP-202ENST00000553699 CARD14Q9BXL6 1004 aa13.27□□□□□ -0.29
GSKIP-202ENST00000553699 KIF24Q5T7B8 1368 aa13.27□□□□□ -0.29
GSKIP-202ENST00000553699 PCNTO95613 3336 aa13.26□□□□□ -0.29
GSKIP-202ENST00000553699 FBLN1P23142 703 aa13.26□□□□□ -0.29
GSKIP-202ENST00000553699 CGNL1Q0VF96 1302 aa13.26□□□□□ -0.29
GSKIP-202ENST00000553699 RRS1Q15050 365 aaKnown RBP13.26□□□□□ -0.29
GSKIP-202ENST00000553699 NHSQ6T4R5 1651 aa13.26□□□□□ -0.29
GSKIP-202ENST00000553699 POLR3GLQ9BT43 218 aa13.26□□□□□ -0.29
GSKIP-202ENST00000553699 FLT4P35916 1363 aa13.25□□□□□ -0.29
GSKIP-202ENST00000553699 WDR90Q96KV7 1748 aa13.25□□□□□ -0.29
GSKIP-202ENST00000553699 INSRP06213 1382 aa13.24□□□□□ -0.29
GSKIP-202ENST00000553699 SLC16A10Q8TF71 515 aa13.24□□□□□ -0.29
GSKIP-202ENST00000553699 ANKRD26Q9UPS8 1709 aa13.24□□□□□ -0.29
GSKIP-202ENST00000553699 MLLT1Q03111 559 aaPredicted RBP13.23□□□□□ -0.29
GSKIP-202ENST00000553699 PTF1AQ7RTS3 328 aa13.23□□□□□ -0.29
GSKIP-202ENST00000553699 MEGF6O75095 1541 aa13.22□□□□□ -0.29
GSKIP-202ENST00000553699 RGPD2P0DJD1 1756 aa13.22□□□□□ -0.29
GSKIP-202ENST00000553699 RBM46Q8TBY0 533 aaKnown RBP13.21□□□□□ -0.29
GSKIP-202ENST00000553699 HSP90AB2PQ58FF8 381 aa13.2□□□□□ -0.3
GSKIP-202ENST00000553699 NSD2O96028 1365 aa13.2□□□□□ -0.3
GSKIP-202ENST00000553699 NBPF6Q5VWK0 638 aa13.19□□□□□ -0.3
GSKIP-202ENST00000553699 ACSBG1Q96GR2 724 aa13.19□□□□□ -0.3
GSKIP-202ENST00000553699 NBPF4Q96M43 638 aa13.19□□□□□ -0.3
GSKIP-202ENST00000553699 EMILIN1Q9Y6C2 1016 aa13.19□□□□□ -0.3
GSKIP-202ENST00000553699 FSTL1Q12841 308 aa13.18□□□□□ -0.3
GSKIP-202ENST00000553699 DDX54Q8TDD1 881 aaKnown RBP13.18□□□□□ -0.3
GSKIP-202ENST00000553699 RAPGEF4Q8WZA2 1011 aa13.18□□□□□ -0.3
GSKIP-202ENST00000553699 DOT1LQ8TEK3 1739 aa13.18□□□□□ -0.3
GSKIP-202ENST00000553699 BTAF1O14981 1849 aa13.18□□□□□ -0.3
GSKIP-202ENST00000553699 PPM1GO15355 546 aaPredicted RBP13.17□□□□□ -0.3
GSKIP-202ENST00000553699 USHBP1Q8N6Y0 703 aa13.17□□□□□ -0.3
GSKIP-202ENST00000553699 ZCRB1Q8TBF4 217 aaKnown RBP13.17□□□□□ -0.3
GSKIP-202ENST00000553699 PANK3Q9H999 370 aa13.17□□□□□ -0.3
GSKIP-202ENST00000553699 NCAPD2Q15021 1401 aa13.16□□□□□ -0.3
GSKIP-202ENST00000553699 TATP17735 454 aaPredicted RBP13.16□□□□□ -0.3
GSKIP-202ENST00000553699 WASHC2AQ641Q2 1341 aa13.15□□□□□ -0.3
GSKIP-202ENST00000553699 C16orf71Q8IYS4 520 aaPredicted RBP13.15□□□□□ -0.3
GSKIP-202ENST00000553699 KIF7Q2M1P5 1343 aa13.14□□□□□ -0.31
GSKIP-202ENST00000553699 PCDH11XQ9BZA7 1347 aa13.14□□□□□ -0.31
GSKIP-202ENST00000553699 PCDH11YQ9BZA8 1340 aa13.14□□□□□ -0.31
GSKIP-202ENST00000553699 PKD1L3Q7Z443 1732 aa13.14□□□□□ -0.31
GSKIP-202ENST00000553699 MAP2P11137 1827 aaKnown RBP13.14□□□□□ -0.31
GSKIP-202ENST00000553699 POLKQ9UBT6 870 aa13.14□□□□□ -0.31
GSKIP-202ENST00000553699 PAPPAQ13219 1627 aa13.13□□□□□ -0.31
GSKIP-202ENST00000553699 TNNT2P45379 298 aaPredicted RBP13.13□□□□□ -0.31
GSKIP-202ENST00000553699 RGS19P49795 217 aa13.13□□□□□ -0.31
GSKIP-202ENST00000553699 KNSTRNQ9Y448 316 aa13.13□□□□□ -0.31
GSKIP-202ENST00000553699 SYTL4Q96C24 671 aaPredicted RBP13.12□□□□□ -0.31
GSKIP-202ENST00000553699 PRDM10Q9NQV6 1147 aa13.12□□□□□ -0.31
GSKIP-202ENST00000553699 ZNF827Q17R98 1081 aa13.11□□□□□ -0.31
GSKIP-202ENST00000553699 MORC1Q86VD1 984 aa13.11□□□□□ -0.31
GSKIP-202ENST00000553699 NMRK2Q9NPI5 230 aa13.11□□□□□ -0.31
GSKIP-202ENST00000553699 PLEKHG2Q9H7P9 1386 aa13.1□□□□□ -0.31
GSKIP-202ENST00000553699 PRIM1P49642 420 aaKnown RBP13.1□□□□□ -0.31
GSKIP-202ENST00000553699 ABHD8Q96I13 439 aa13.1□□□□□ -0.31
GSKIP-202ENST00000553699 EYA1Q99502 592 aa13.1□□□□□ -0.31
GSKIP-202ENST00000553699 LY75O60449 1722 aa13.09□□□□□ -0.31
GSKIP-202ENST00000553699 EIF4A2Q14240 407 aaKnown RBP13.09□□□□□ -0.31
GSKIP-202ENST00000553699 SLC27A3Q5K4L6 730 aa13.09□□□□□ -0.31
GSKIP-202ENST00000553699 SPG7Q9UQ90 795 aa13.09□□□□□ -0.31
GSKIP-202ENST00000553699 CD2APQ9Y5K6 639 aa13.09□□□□□ -0.31
GSKIP-202ENST00000553699 TOGARAM1Q9Y4F4 1720 aa13.08□□□□□ -0.32
GSKIP-202ENST00000553699 IGSF1Q8N6C5 1336 aa13.08□□□□□ -0.32
GSKIP-202ENST00000553699 CYP27B1O15528 508 aa13.07□□□□□ -0.32
GSKIP-202ENST00000553699 AMER1Q5JTC6 1135 aaPredicted RBP13.07□□□□□ -0.32
GSKIP-202ENST00000553699 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms