RNA–Protein interactions for RNA: ENST00000553597.5

SNRPN-206, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

TSL 3

Gene SNRPN, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-206ENST00000553597 PRKRIP1Q9H875 184 aaPredicted RBP10.8□□□□□ -0.68
SNRPN-206ENST00000553597 DISP2A7MBM2 1401 aa10.8□□□□□ -0.68
SNRPN-206ENST00000553597 TNS2Q63HR2 1409 aa10.79□□□□□ -0.68
SNRPN-206ENST00000553597 DIAPH1O60610 1272 aaKnown RBP10.79□□□□□ -0.68
SNRPN-206ENST00000553597 HMOX1P09601 288 aa10.79□□□□□ -0.68
SNRPN-206ENST00000553597 AEBP1Q8IUX7 1158 aa10.79□□□□□ -0.68
SNRPN-206ENST00000553597 DLG5Q8TDM6 1919 aa10.79□□□□□ -0.68
SNRPN-206ENST00000553597 IL2RBP14784 551 aa10.78□□□□□ -0.68
SNRPN-206ENST00000553597 C1QBPQ07021 282 aaKnown RBP10.78□□□□□ -0.68
SNRPN-206ENST00000553597 TOGARAM1Q9Y4F4 1720 aa10.78□□□□□ -0.68
SNRPN-206ENST00000553597 IL13P35225 146 aa10.77□□□□□ -0.69
SNRPN-206ENST00000553597 BARGINQ6ZT62 677 aa10.77□□□□□ -0.69
SNRPN-206ENST00000553597 RAPGEF4Q8WZA2 1011 aa10.77□□□□□ -0.69
SNRPN-206ENST00000553597 THRAP3Q9Y2W1 955 aaKnown RBP10.77□□□□□ -0.69
SNRPN-206ENST00000553597 IGSF1Q8N6C5 1336 aa10.77□□□□□ -0.69
SNRPN-206ENST00000553597 ITGB4P16144 1822 aa10.77□□□□□ -0.69
SNRPN-206ENST00000553597 OVOS2A0A0G2JMS6 1433 aa10.76□□□□□ -0.69
SNRPN-206ENST00000553597 NCAPD2Q15021 1401 aa10.76□□□□□ -0.69
SNRPN-206ENST00000553597 TNS1Q9HBL0 1735 aaKnown RBP10.76□□□□□ -0.69
SNRPN-206ENST00000553597 TATP17735 454 aaPredicted RBP10.76□□□□□ -0.69
SNRPN-206ENST00000553597 DDB1Q16531 1140 aa10.76□□□□□ -0.69
SNRPN-206ENST00000553597 SULT6B1Q6IMI4 303 aa10.76□□□□□ -0.69
SNRPN-206ENST00000553597 KRT27Q7Z3Y8 459 aa10.76□□□□□ -0.69
SNRPN-206ENST00000553597 U2AF1L5P0DN76 240 aaPredicted RBP10.75□□□□□ -0.69
SNRPN-206ENST00000553597 U2AF1Q01081 240 aaKnown RBP eCLIP10.75□□□□□ -0.69
SNRPN-206ENST00000553597 PDE3BQ13370 1112 aa10.75□□□□□ -0.69
SNRPN-206ENST00000553597 CCDC184Q52MB2 194 aa10.75□□□□□ -0.69
SNRPN-206ENST00000553597 DIEXFQ68CQ4 756 aaKnown RBP10.75□□□□□ -0.69
SNRPN-206ENST00000553597 DDX54Q8TDD1 881 aaKnown RBP10.75□□□□□ -0.69
SNRPN-206ENST00000553597 FOXD4L1Q9NU39 408 aa10.75□□□□□ -0.69
SNRPN-206ENST00000553597 BTAF1O14981 1849 aa10.74□□□□□ -0.69
SNRPN-206ENST00000553597 NHSQ6T4R5 1651 aa10.74□□□□□ -0.69
SNRPN-206ENST00000553597 SCN11AQ9UI33 1791 aa10.74□□□□□ -0.69
SNRPN-206ENST00000553597 EXOC5O00471 708 aa10.73□□□□□ -0.69
SNRPN-206ENST00000553597 NUDCQ9Y266 331 aa10.73□□□□□ -0.69
SNRPN-206ENST00000553597 U3KPZ7 1027 aaPredicted RBP10.73□□□□□ -0.69
SNRPN-206ENST00000553597 ZCRB1Q8TBF4 217 aaKnown RBP10.72□□□□□ -0.69
SNRPN-206ENST00000553597 CDCA7Q9BWT1 371 aaPredicted RBP10.72□□□□□ -0.69
SNRPN-206ENST00000553597 MRS2Q9HD23 443 aa10.72□□□□□ -0.69
SNRPN-206ENST00000553597 SENP3-EIF4A1A0A087X0R7 540 aa10.71□□□□□ -0.69
SNRPN-206ENST00000553597 ONECUT3O60422 494 aaPredicted RBP10.71□□□□□ -0.69
SNRPN-206ENST00000553597 PRKAR2BP31323 418 aa10.71□□□□□ -0.69
SNRPN-206ENST00000553597 KDRP35968 1356 aa10.71□□□□□ -0.69
SNRPN-206ENST00000553597 WDR43Q15061 677 aaKnown RBP eCLIP10.71□□□□□ -0.69
SNRPN-206ENST00000553597 ZNF530Q6P9A1 599 aaPredicted RBP10.71□□□□□ -0.69
SNRPN-206ENST00000553597 CCDC146Q8IYE0 955 aa10.71□□□□□ -0.69
SNRPN-206ENST00000553597 MARCH10Q8NA82 808 aaPredicted RBP10.71□□□□□ -0.69
SNRPN-206ENST00000553597 ACSBG1Q96GR2 724 aa10.71□□□□□ -0.69
SNRPN-206ENST00000553597 PCDH11XQ9BZA7 1347 aa10.7□□□□□ -0.7
SNRPN-206ENST00000553597 PCDH11YQ9BZA8 1340 aa10.7□□□□□ -0.7
SNRPN-206ENST00000553597 SPG7Q9UQ90 795 aa10.7□□□□□ -0.7
SNRPN-206ENST00000553597 SYTL4Q96C24 671 aaPredicted RBP10.69□□□□□ -0.7
SNRPN-206ENST00000553597 RSPH6AQ9H0K4 717 aa10.69□□□□□ -0.7
SNRPN-206ENST00000553597 CYP27B1O15528 508 aa10.68□□□□□ -0.7
SNRPN-206ENST00000553597 TRIM37O94972 964 aa10.68□□□□□ -0.7
SNRPN-206ENST00000553597 MYCNP04198 464 aaPredicted RBP10.68□□□□□ -0.7
SNRPN-206ENST00000553597 PLEKHO1Q53GL0 409 aaPredicted RBP10.68□□□□□ -0.7
SNRPN-206ENST00000553597 MIER1Q8N108 512 aa10.68□□□□□ -0.7
SNRPN-206ENST00000553597 SIPA1L3O60292 1781 aaPredicted RBP10.67□□□□□ -0.7
SNRPN-206ENST00000553597 MAPK8IP3Q9UPT6 1336 aa10.67□□□□□ -0.7
SNRPN-206ENST00000553597 MTHFSDQ2M296 383 aaKnown RBP10.67□□□□□ -0.7
SNRPN-206ENST00000553597 C1orf141Q5JVX7 400 aa10.67□□□□□ -0.7
SNRPN-206ENST00000553597 PTF1AQ7RTS3 328 aa10.67□□□□□ -0.7
SNRPN-206ENST00000553597 EP400Q96L91 3159 aa10.67□□□□□ -0.7
SNRPN-206ENST00000553597 KDM6AO15550 1401 aaPredicted RBP10.67□□□□□ -0.7
SNRPN-206ENST00000553597 KCNQ2O43526 872 aa10.66□□□□□ -0.7
SNRPN-206ENST00000553597 NEFMP07197 916 aa10.66□□□□□ -0.7
SNRPN-206ENST00000553597 PHKG2P15735 406 aa10.66□□□□□ -0.7
SNRPN-206ENST00000553597 FAM196AQ6ZSG2 479 aa10.66□□□□□ -0.7
SNRPN-206ENST00000553597 FAM9BQ8IZU0 186 aa10.66□□□□□ -0.7
SNRPN-206ENST00000553597 PHACTR3Q96KR7 559 aa10.66□□□□□ -0.7
SNRPN-206ENST00000553597 NUP188Q5SRE5 1749 aa10.65□□□□□ -0.7
SNRPN-206ENST00000553597 MPRIPQ6WCQ1 1025 aa10.65□□□□□ -0.7
SNRPN-206ENST00000553597 IFNL2Q8IZJ0 200 aa10.65□□□□□ -0.7
SNRPN-206ENST00000553597 ADAMTS8Q9UP79 889 aa10.65□□□□□ -0.7
SNRPN-206ENST00000553597 RRP7AQ9Y3A4 280 aaKnown RBP10.65□□□□□ -0.7
SNRPN-206ENST00000553597 RREB1Q92766 1687 aa10.65□□□□□ -0.7
SNRPN-206ENST00000553597 ADAMTS7Q9UKP4 1686 aa10.65□□□□□ -0.7
SNRPN-206ENST00000553597 MAP3K5Q99683 1374 aa10.65□□□□□ -0.71
SNRPN-206ENST00000553597 LY75O60449 1722 aa10.64□□□□□ -0.71
SNRPN-206ENST00000553597 FCHSD2O94868 740 aa10.64□□□□□ -0.71
SNRPN-206ENST00000553597 CACNB1Q02641 598 aaPredicted RBP10.64□□□□□ -0.71
SNRPN-206ENST00000553597 SF3B2Q13435 895 aaKnown RBP10.64□□□□□ -0.71
SNRPN-206ENST00000553597 NEUROD2Q15784 382 aa10.64□□□□□ -0.71
SNRPN-206ENST00000553597 AMOTQ4VCS5 1084 aa10.64□□□□□ -0.71
SNRPN-206ENST00000553597 UPF1Q92900 1129 aaKnown RBP eCLIP10.64□□□□□ -0.71
SNRPN-206ENST00000553597 PAPPAQ13219 1627 aa10.64□□□□□ -0.71
SNRPN-206ENST00000553597 RGPD3A6NKT7 1758 aaPredicted RBP10.63□□□□□ -0.71
SNRPN-206ENST00000553597 RGPD4Q7Z3J3 1758 aa10.63□□□□□ -0.71
SNRPN-206ENST00000553597 PRIM1P49642 420 aaKnown RBP10.63□□□□□ -0.71
SNRPN-206ENST00000553597 DEFB132Q7Z7B7 95 aa10.63□□□□□ -0.71
SNRPN-206ENST00000553597 TAF1LQ8IZX4 1826 aa10.63□□□□□ -0.71
SNRPN-206ENST00000553597 APBA3O96018 575 aa10.62□□□□□ -0.71
SNRPN-206ENST00000553597 DCTN1Q14203 1278 aa10.62□□□□□ -0.71
SNRPN-206ENST00000553597 SAMD1Q6SPF0 538 aaPredicted RBP10.62□□□□□ -0.71
SNRPN-206ENST00000553597 GAS2L2Q8NHY3 880 aa10.62□□□□□ -0.71
SNRPN-206ENST00000553597 PLEKHF1Q96S99 279 aa10.62□□□□□ -0.71
SNRPN-206ENST00000553597 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.62□□□□□ -0.71
SNRPN-206ENST00000553597 C5P01031 1676 aa10.62□□□□□ -0.71
SNRPN-206ENST00000553597 TUBGCP6Q96RT7 1819 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms