RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 BIN2Q9UBW5 565 aaPredicted RBP5.31□□□□□ -1.56
RDH11-204ENST00000553578 FAM198AQ9UFP1 575 aa5.31□□□□□ -1.56
RDH11-204ENST00000553578 ADGRG1Q9Y653 693 aa5.31□□□□□ -1.56
RDH11-204ENST00000553578 KIF15Q9NS87 1388 aa5.3□□□□□ -1.56
RDH11-204ENST00000553578 ZFYVE9O95405 1425 aa5.3□□□□□ -1.56
RDH11-204ENST00000553578 PSMD1Q99460 953 aa5.3□□□□□ -1.56
RDH11-204ENST00000553578 BRPF3Q9ULD4 1205 aa5.3□□□□□ -1.56
RDH11-204ENST00000553578 CLTCQ00610 1675 aaKnown RBP5.3□□□□□ -1.56
RDH11-204ENST00000553578 HSP90AA1P07900 732 aaKnown RBP5.3□□□□□ -1.56
RDH11-204ENST00000553578 MPHOSPH9Q99550 1183 aa5.3□□□□□ -1.56
RDH11-204ENST00000553578 DHX29Q7Z478 1369 aaKnown RBP5.3□□□□□ -1.56
RDH11-204ENST00000553578 ABCC3O15438 1527 aa5.3□□□□□ -1.56
RDH11-204ENST00000553578 BHMG1C9JSJ3 638 aaPredicted RBP5.3□□□□□ -1.56
RDH11-204ENST00000553578 FECHP22830 423 aa5.3□□□□□ -1.56
RDH11-204ENST00000553578 PTPN5P54829 565 aa5.3□□□□□ -1.56
RDH11-204ENST00000553578 TTC13Q8NBP0 860 aa5.3□□□□□ -1.56
RDH11-204ENST00000553578 MYOM1P52179 1685 aa5.3□□□□□ -1.56
RDH11-204ENST00000553578 NOS1P29475 1434 aa5.29□□□□□ -1.56
RDH11-204ENST00000553578 BARGINQ6ZT62 677 aa5.29□□□□□ -1.56
RDH11-204ENST00000553578 NOL8Q76FK4 1167 aaKnown RBP5.29□□□□□ -1.56
RDH11-204ENST00000553578 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.29□□□□□ -1.56
RDH11-204ENST00000553578 FLIIQ13045 1269 aa5.29□□□□□ -1.56
RDH11-204ENST00000553578 WWC1Q8IX03 1113 aa5.29□□□□□ -1.56
RDH11-204ENST00000553578 ARHGEF40Q8TER5 1519 aa5.29□□□□□ -1.56
RDH11-204ENST00000553578 IRF6O14896 467 aa5.29□□□□□ -1.56
RDH11-204ENST00000553578 GPR37O15354 613 aa5.29□□□□□ -1.56
RDH11-204ENST00000553578 SLF2Q8IX21 1173 aa5.29□□□□□ -1.56
RDH11-204ENST00000553578 CFDP1Q9UEE9 299 aaPredicted RBP5.29□□□□□ -1.56
RDH11-204ENST00000553578 KNDC1Q76NI1 1749 aa5.28□□□□□ -1.56
RDH11-204ENST00000553578 RCCD1A6NED2 376 aa5.28□□□□□ -1.56
RDH11-204ENST00000553578 PDE4DQ08499 809 aa5.28□□□□□ -1.56
RDH11-204ENST00000553578 MMRN1Q13201 1228 aa5.28□□□□□ -1.56
RDH11-204ENST00000553578 SAMD7Q7Z3H4 446 aa5.28□□□□□ -1.56
RDH11-204ENST00000553578 SPATA31D1Q6ZQQ2 1576 aa5.28□□□□□ -1.56
RDH11-204ENST00000553578 A2MP01023 1474 aa5.28□□□□□ -1.56
RDH11-204ENST00000553578 PREX1Q8TCU6 1659 aa5.28□□□□□ -1.56
RDH11-204ENST00000553578 CSB-PGBD3P0DP91 1061 aa5.28□□□□□ -1.56
RDH11-204ENST00000553578 PPP4CP60510 307 aa5.28□□□□□ -1.56
RDH11-204ENST00000553578 IPO4Q8TEX9 1081 aaKnown RBP5.28□□□□□ -1.56
RDH11-204ENST00000553578 ZNF644Q9H582 1327 aaPredicted RBP5.28□□□□□ -1.56
RDH11-204ENST00000553578 ADGRL1O94910 1474 aa5.28□□□□□ -1.56
RDH11-204ENST00000553578 ZMYND10O75800 440 aa5.28□□□□□ -1.56
RDH11-204ENST00000553578 RGS3P49796 1198 aa5.28□□□□□ -1.56
RDH11-204ENST00000553578 METTL3Q86U44 580 aaKnown RBP5.28□□□□□ -1.56
RDH11-204ENST00000553578 CCDC102AQ96A19 550 aa5.28□□□□□ -1.56
RDH11-204ENST00000553578 SWT1Q5T5J6 900 aaKnown RBP5.27□□□□□ -1.57
RDH11-204ENST00000553578 HCSTQ9UBK5 93 aa5.27□□□□□ -1.57
RDH11-204ENST00000553578 CNTLNQ9NXG0 1405 aa5.27□□□□□ -1.57
RDH11-204ENST00000553578 TMEM131LA2VDJ0 1609 aa5.27□□□□□ -1.57
RDH11-204ENST00000553578 SMARCA5O60264 1052 aaPredicted RBP5.27□□□□□ -1.57
RDH11-204ENST00000553578 PXYLP1Q8TE99 480 aa5.27□□□□□ -1.57
RDH11-204ENST00000553578 HPS5Q9UPZ3 1129 aa5.27□□□□□ -1.57
RDH11-204ENST00000553578 RRP9O43818 475 aaKnown RBP5.27□□□□□ -1.57
RDH11-204ENST00000553578 ADGRB1O14514 1584 aa5.27□□□□□ -1.57
RDH11-204ENST00000553578 KTN1Q86UP2 1357 aaKnown RBP5.27□□□□□ -1.57
RDH11-204ENST00000553578 BCAMP50895 628 aa5.26□□□□□ -1.57
RDH11-204ENST00000553578 EYA1Q99502 592 aa5.26□□□□□ -1.57
RDH11-204ENST00000553578 SBNO2Q9Y2G9 1366 aa5.26□□□□□ -1.57
RDH11-204ENST00000553578 THSD4Q6ZMP0 1018 aa5.26□□□□□ -1.57
RDH11-204ENST00000553578 SOWAHBA6NEL2 793 aa5.26□□□□□ -1.57
RDH11-204ENST00000553578 SULF1Q8IWU6 871 aa5.26□□□□□ -1.57
RDH11-204ENST00000553578 CNPY4Q8N129 248 aa5.26□□□□□ -1.57
RDH11-204ENST00000553578 PRDM10Q9NQV6 1147 aa5.26□□□□□ -1.57
RDH11-204ENST00000553578 RIMS1Q86UR5 1692 aaKnown RBP5.26□□□□□ -1.57
RDH11-204ENST00000553578 RDH13Q8NBN7 331 aa5.26□□□□□ -1.57
RDH11-204ENST00000553578 TSR3Q9UJK0 312 aaKnown RBP5.26□□□□□ -1.57
RDH11-204ENST00000553578 MDM2Q00987 491 aaPredicted RBP5.25□□□□□ -1.57
RDH11-204ENST00000553578 EFCAB2Q5VUJ9 269 aa5.25□□□□□ -1.57
RDH11-204ENST00000553578 SECISBP2LQ93073 1101 aaKnown RBP5.25□□□□□ -1.57
RDH11-204ENST00000553578 NEXMIFQ5QGS0 1516 aa5.25□□□□□ -1.57
RDH11-204ENST00000553578 CLCN1P35523 988 aa5.25□□□□□ -1.57
RDH11-204ENST00000553578 FAM177A1Q8N128 213 aaPredicted RBP5.25□□□□□ -1.57
RDH11-204ENST00000553578 TMEM134Q9H6X4 195 aa5.25□□□□□ -1.57
RDH11-204ENST00000553578 USP54Q70EL1 1684 aa5.25□□□□□ -1.57
RDH11-204ENST00000553578 COL17A1Q9UMD9 1497 aaPredicted RBP5.24□□□□□ -1.57
RDH11-204ENST00000553578 DDX11L8A8MPP1 907 aa5.24□□□□□ -1.57
RDH11-204ENST00000553578 C3orf80F5H4A9 247 aa5.24□□□□□ -1.57
RDH11-204ENST00000553578 CCER2I3L3R5 266 aa5.24□□□□□ -1.57
RDH11-204ENST00000553578 NCLP19338 710 aaKnown RBP5.24□□□□□ -1.57
RDH11-204ENST00000553578 KMT5BQ4FZB7 885 aa5.24□□□□□ -1.57
RDH11-204ENST00000553578 PRR14Q9BWN1 585 aa5.24□□□□□ -1.57
RDH11-204ENST00000553578 FTSJ3Q8IY81 847 aaKnown RBP5.24□□□□□ -1.57
RDH11-204ENST00000553578 CD109Q6YHK3 1445 aa5.24□□□□□ -1.57
RDH11-204ENST00000553578 GTF2E1P29083 439 aaPredicted RBP5.24□□□□□ -1.57
RDH11-204ENST00000553578 FAM50AQ14320 339 aaKnown RBP5.24□□□□□ -1.57
RDH11-204ENST00000553578 NLRP7Q8WX94 980 aa5.24□□□□□ -1.57
RDH11-204ENST00000553578 ARHGEF28Q8N1W1 1705 aaKnown RBP5.24□□□□□ -1.57
RDH11-204ENST00000553578 DLC1Q96QB1 1528 aa5.23□□□□□ -1.57
RDH11-204ENST00000553578 NYAP1Q6ZVC0 841 aa5.23□□□□□ -1.57
RDH11-204ENST00000553578 DDRGK1Q96HY6 314 aa5.23□□□□□ -1.57
RDH11-204ENST00000553578 NUP155O75694 1391 aa5.23□□□□□ -1.57
RDH11-204ENST00000553578 ROCK2O75116 1388 aaKnown RBP5.23□□□□□ -1.57
RDH11-204ENST00000553578 NPC1L1Q9UHC9 1359 aa5.23□□□□□ -1.57
RDH11-204ENST00000553578 ANKRD26Q9UPS8 1709 aa5.23□□□□□ -1.57
RDH11-204ENST00000553578 KDM4AO75164 1064 aa5.23□□□□□ -1.57
RDH11-204ENST00000553578 ANP32AP39687 249 aaKnown RBP5.22□□□□□ -1.57
RDH11-204ENST00000553578 ZNF592Q92610 1267 aa5.22□□□□□ -1.57
RDH11-204ENST00000553578 GPCPD1Q9NPB8 672 aa5.22□□□□□ -1.57
RDH11-204ENST00000553578 SERPINA10Q9UK55 444 aa5.22□□□□□ -1.57
RDH11-204ENST00000553578 IVNS1ABPQ9Y6Y0 642 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms