RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 BCL2L13Q9BXK5 485 aa25.25■■□□□ 1.63
RBFOX1-215ENST00000553186 GNAT3A8MTJ3 354 aa25.25■■□□□ 1.63
RBFOX1-215ENST00000553186 LMO7Q8WWI1 1683 aa25.25■■□□□ 1.63
RBFOX1-215ENST00000553186 ROBO1Q9Y6N7 1651 aa25.24■■□□□ 1.63
RBFOX1-215ENST00000553186 MAP3K5Q99683 1374 aa25.23■■□□□ 1.63
RBFOX1-215ENST00000553186 SSH1Q8WYL5 1049 aa25.22■■□□□ 1.63
RBFOX1-215ENST00000553186 PDE3AQ14432 1141 aa25.22■■□□□ 1.63
RBFOX1-215ENST00000553186 TSPYL6Q8N831 410 aa25.22■■□□□ 1.63
RBFOX1-215ENST00000553186 VAMP4O75379 141 aa25.21■■□□□ 1.63
RBFOX1-215ENST00000553186 ZNF428Q96B54 188 aa25.21■■□□□ 1.63
RBFOX1-215ENST00000553186 IL17REQ8NFR9 667 aa25.2■■□□□ 1.62
RBFOX1-215ENST00000553186 FRAT1Q92837 279 aaPredicted RBP25.2■■□□□ 1.62
RBFOX1-215ENST00000553186 AHDC1Q5TGY3 1603 aaPredicted RBP25.2■■□□□ 1.62
RBFOX1-215ENST00000553186 C8orf58Q8NAV2 365 aa25.2■■□□□ 1.62
RBFOX1-215ENST00000553186 CCDC136Q96JN2 1154 aa25.2■■□□□ 1.62
RBFOX1-215ENST00000553186 PRDM11Q9NQV5 511 aa25.2■■□□□ 1.62
RBFOX1-215ENST00000553186 ABCA3Q99758 1704 aa25.19■■□□□ 1.62
RBFOX1-215ENST00000553186 AMOTQ4VCS5 1084 aa25.19■■□□□ 1.62
RBFOX1-215ENST00000553186 SMC4Q9NTJ3 1288 aa25.19■■□□□ 1.62
RBFOX1-215ENST00000553186 NLRP2Q9NX02 1062 aa25.19■■□□□ 1.62
RBFOX1-215ENST00000553186 ALDH1L2Q3SY69 923 aa25.18■■□□□ 1.62
RBFOX1-215ENST00000553186 PLEKHO1Q53GL0 409 aaPredicted RBP25.18■■□□□ 1.62
RBFOX1-215ENST00000553186 CANXP27824 592 aaKnown RBP25.18■■□□□ 1.62
RBFOX1-215ENST00000553186 LRRC37A3O60309 1634 aa25.18■■□□□ 1.62
RBFOX1-215ENST00000553186 HAP1P54257 671 aaPredicted RBP25.17■■□□□ 1.62
RBFOX1-215ENST00000553186 CSB-PGBD3P0DP91 1061 aa25.16■■□□□ 1.62
RBFOX1-215ENST00000553186 TWISTNBQ3B726 338 aaPredicted RBP25.16■■□□□ 1.62
RBFOX1-215ENST00000553186 FAM208AQ9UK61 1670 aaKnown RBP25.16■■□□□ 1.62
RBFOX1-215ENST00000553186 CEMIPQ8WUJ3 1361 aa25.16■■□□□ 1.62
RBFOX1-215ENST00000553186 ELL2O00472 640 aaPredicted RBP25.15■■□□□ 1.62
RBFOX1-215ENST00000553186 BRPF1P55201 1214 aaPredicted RBP25.15■■□□□ 1.62
RBFOX1-215ENST00000553186 MIS18AQ9NYP9 233 aa25.15■■□□□ 1.62
RBFOX1-215ENST00000553186 AKAP4Q5JQC9 854 aa25.14■■□□□ 1.62
RBFOX1-215ENST00000553186 ZNF530Q6P9A1 599 aaPredicted RBP25.14■■□□□ 1.62
RBFOX1-215ENST00000553186 PANK1Q8TE04 598 aa25.14■■□□□ 1.62
RBFOX1-215ENST00000553186 TNNQ9UQP3 1299 aa25.14■■□□□ 1.61
RBFOX1-215ENST00000553186 RLBP1P12271 317 aa25.12■■□□□ 1.61
RBFOX1-215ENST00000553186 ZKSCAN2Q63HK3 967 aa25.12■■□□□ 1.61
RBFOX1-215ENST00000553186 TSPYL4Q9UJ04 414 aa25.12■■□□□ 1.61
RBFOX1-215ENST00000553186 KRT24Q2M2I5 525 aa25.12■■□□□ 1.61
RBFOX1-215ENST00000553186 COL5A2P05997 1499 aaPredicted RBP25.11■■□□□ 1.61
RBFOX1-215ENST00000553186 RAPGEF4Q8WZA2 1011 aa25.11■■□□□ 1.61
RBFOX1-215ENST00000553186 WDR17Q8IZU2 1322 aa25.11■■□□□ 1.61
RBFOX1-215ENST00000553186 LGR6Q9HBX8 967 aa25.11■■□□□ 1.61
RBFOX1-215ENST00000553186 NOB1Q9ULX3 412 aaKnown RBP25.1■■□□□ 1.61
RBFOX1-215ENST00000553186 MEGF6O75095 1541 aa25.1■■□□□ 1.61
RBFOX1-215ENST00000553186 PLEKHG2Q9H7P9 1386 aa25.1■■□□□ 1.61
RBFOX1-215ENST00000553186 KIF16BQ96L93 1317 aa25.1■■□□□ 1.61
RBFOX1-215ENST00000553186 TOM1O60784 492 aa25.1■■□□□ 1.61
RBFOX1-215ENST00000553186 TAF7Q15545 349 aaPredicted RBP25.1■■□□□ 1.61
RBFOX1-215ENST00000553186 BABAM1Q9NWV8 329 aa25.1■■□□□ 1.61
RBFOX1-215ENST00000553186 TRIM27P14373 513 aa25.09■■□□□ 1.61
RBFOX1-215ENST00000553186 COG6Q9Y2V7 657 aa25.09■■□□□ 1.61
RBFOX1-215ENST00000553186 MRPL50Q8N5N7 158 aaKnown RBP25.08■■□□□ 1.61
RBFOX1-215ENST00000553186 C1orf141Q5JVX7 400 aa25.08■■□□□ 1.61
RBFOX1-215ENST00000553186 ATF7IPQ6VMQ6 1270 aa25.08■■□□□ 1.61
RBFOX1-215ENST00000553186 CLUAP1Q96AJ1 413 aa25.08■■□□□ 1.61
RBFOX1-215ENST00000553186 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.08■■□□□ 1.61
RBFOX1-215ENST00000553186 TATP17735 454 aaPredicted RBP25.07■■□□□ 1.6
RBFOX1-215ENST00000553186 COL22A1Q8NFW1 1626 aaPredicted RBP25.07■■□□□ 1.6
RBFOX1-215ENST00000553186 MPRIPQ6WCQ1 1025 aa25.07■■□□□ 1.6
RBFOX1-215ENST00000553186 DZIP1LQ8IYY4 767 aaKnown RBP25.06■■□□□ 1.6
RBFOX1-215ENST00000553186 RNMTO43148 476 aaKnown RBP25.05■■□□□ 1.6
RBFOX1-215ENST00000553186 OVOS2A0A0G2JMS6 1433 aa25.04■■□□□ 1.6
RBFOX1-215ENST00000553186 IPO8O15397 1037 aaKnown RBP25.04■■□□□ 1.6
RBFOX1-215ENST00000553186 MS4A1P11836 297 aa25.04■■□□□ 1.6
RBFOX1-215ENST00000553186 COL16A1Q07092 1604 aaPredicted RBP25.04■■□□□ 1.6
RBFOX1-215ENST00000553186 TCERG1O14776 1098 aaKnown RBP25.04■■□□□ 1.6
RBFOX1-215ENST00000553186 TOM1L2Q6ZVM7 507 aa25.04■■□□□ 1.6
RBFOX1-215ENST00000553186 SPG7Q9UQ90 795 aa25.03■■□□□ 1.6
RBFOX1-215ENST00000553186 PIP4K2BP78356 416 aa25.03■■□□□ 1.6
RBFOX1-215ENST00000553186 FTSJ3Q8IY81 847 aaKnown RBP25.03■■□□□ 1.6
RBFOX1-215ENST00000553186 ARHGAP45Q92619 1136 aa25.02■■□□□ 1.6
RBFOX1-215ENST00000553186 LARP1Q6PKG0 1096 aaKnown RBP25.01■■□□□ 1.59
RBFOX1-215ENST00000553186 CARD10Q9BWT7 1032 aa25.01■■□□□ 1.59
RBFOX1-215ENST00000553186 MVPQ14764 893 aaKnown RBP25.01■■□□□ 1.59
RBFOX1-215ENST00000553186 PHLPP1O60346 1717 aa25■■□□□ 1.59
RBFOX1-215ENST00000553186 PHKG2P15735 406 aa25■■□□□ 1.59
RBFOX1-215ENST00000553186 ADAMTS7Q9UKP4 1686 aa25■■□□□ 1.59
RBFOX1-215ENST00000553186 TEFQ10587 303 aa25■■□□□ 1.59
RBFOX1-215ENST00000553186 AEBP2Q6ZN18 517 aaPredicted RBP25■■□□□ 1.59
RBFOX1-215ENST00000553186 STRN4Q9NRL3 753 aa25■■□□□ 1.59
RBFOX1-215ENST00000553186 UBAP1LF5GYI3 381 aa24.98■■□□□ 1.59
RBFOX1-215ENST00000553186 EVA1CP58658 441 aa24.98■■□□□ 1.59
RBFOX1-215ENST00000553186 AAMPQ13685 434 aa24.98■■□□□ 1.59
RBFOX1-215ENST00000553186 BTG4Q9NY30 223 aa24.98■■□□□ 1.59
RBFOX1-215ENST00000553186 PKD1L3Q7Z443 1732 aa24.97■■□□□ 1.59
RBFOX1-215ENST00000553186 CYP27B1O15528 508 aa24.97■■□□□ 1.59
RBFOX1-215ENST00000553186 IFNL2Q8IZJ0 200 aa24.97■■□□□ 1.59
RBFOX1-215ENST00000553186 SOS1Q07889 1333 aaPredicted RBP24.97■■□□□ 1.59
RBFOX1-215ENST00000553186 KDM6AO15550 1401 aaPredicted RBP24.97■■□□□ 1.59
RBFOX1-215ENST00000553186 KDM2BQ8NHM5 1336 aa24.96■■□□□ 1.59
RBFOX1-215ENST00000553186 TMEM57Q8N5G2 664 aa24.96■■□□□ 1.59
RBFOX1-215ENST00000553186 BTBD11A6QL63 1104 aa24.95■■□□□ 1.58
RBFOX1-215ENST00000553186 EIF4A1P60842 406 aaKnown RBP24.95■■□□□ 1.58
RBFOX1-215ENST00000553186 COL14A1Q05707 1796 aaKnown RBP24.95■■□□□ 1.58
RBFOX1-215ENST00000553186 KCNQ3O43525 872 aa24.94■■□□□ 1.58
RBFOX1-215ENST00000553186 KDM3BQ7LBC6 1761 aa24.93■■□□□ 1.58
RBFOX1-215ENST00000553186 IL2RBP14784 551 aa24.93■■□□□ 1.58
RBFOX1-215ENST00000553186 ABCC4O15439 1325 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms