RNA–Protein interactions for RNA: ENST00000553001.1

AP000275.2-202, humanhuman

TSL 5 BASIC

Gene AP000275.2, Length 929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000275.2-202ENST00000553001 KCNQ2O43526 872 aa22.52■■□□□ 1.2
AP000275.2-202ENST00000553001 SBF2Q86WG5 1849 aa22.5■■□□□ 1.19
AP000275.2-202ENST00000553001 NPC1L1Q9UHC9 1359 aa22.5■■□□□ 1.19
AP000275.2-202ENST00000553001 NCAPD2Q15021 1401 aa22.49■■□□□ 1.19
AP000275.2-202ENST00000553001 MTHFSP49914 203 aa22.48■■□□□ 1.19
AP000275.2-202ENST00000553001 PLSCR1O15162 318 aa22.46■■□□□ 1.19
AP000275.2-202ENST00000553001 PARD3Q8TEW0 1356 aa22.46■■□□□ 1.19
AP000275.2-202ENST00000553001 IGSF1Q8N6C5 1336 aa22.45■■□□□ 1.18
AP000275.2-202ENST00000553001 SHANK3Q9BYB0 1731 aa22.45■■□□□ 1.18
AP000275.2-202ENST00000553001 PCDH11XQ9BZA7 1347 aa22.43■■□□□ 1.18
AP000275.2-202ENST00000553001 PCDH11YQ9BZA8 1340 aa22.43■■□□□ 1.18
AP000275.2-202ENST00000553001 NHSQ6T4R5 1651 aa22.42■■□□□ 1.18
AP000275.2-202ENST00000553001 PSDA5PKW4 1024 aaPredicted RBP22.42■■□□□ 1.18
AP000275.2-202ENST00000553001 CYP27B1O15528 508 aa22.42■■□□□ 1.18
AP000275.2-202ENST00000553001 IL13P35225 146 aa22.42■■□□□ 1.18
AP000275.2-202ENST00000553001 SYTL4Q96C24 671 aaPredicted RBP22.42■■□□□ 1.18
AP000275.2-202ENST00000553001 ZEB1P37275 1124 aaPredicted RBP22.41■■□□□ 1.18
AP000275.2-202ENST00000553001 PRIM1P49642 420 aaKnown RBP22.41■■□□□ 1.18
AP000275.2-202ENST00000553001 PROM2Q8N271 834 aa22.41■■□□□ 1.18
AP000275.2-202ENST00000553001 SPG7Q9UQ90 795 aa22.41■■□□□ 1.18
AP000275.2-202ENST00000553001 AEBP1Q8IUX7 1158 aa22.4■■□□□ 1.18
AP000275.2-202ENST00000553001 RREB1Q92766 1687 aa22.39■■□□□ 1.18
AP000275.2-202ENST00000553001 R3HDM1Q15032 1099 aaKnown RBP22.39■■□□□ 1.17
AP000275.2-202ENST00000553001 TXNRD1Q16881 649 aa22.38■■□□□ 1.17
AP000275.2-202ENST00000553001 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.38■■□□□ 1.175e-8■■□□□ 12.1
AP000275.2-202ENST00000553001 PKD1L3Q7Z443 1732 aa22.37■■□□□ 1.17
AP000275.2-202ENST00000553001 SULT6B1Q6IMI4 303 aa22.37■■□□□ 1.17
AP000275.2-202ENST00000553001 NUP188Q5SRE5 1749 aa22.36■■□□□ 1.17
AP000275.2-202ENST00000553001 DOT1LQ8TEK3 1739 aa22.36■■□□□ 1.17
AP000275.2-202ENST00000553001 RGPD3A6NKT7 1758 aaPredicted RBP22.35■■□□□ 1.17
AP000275.2-202ENST00000553001 RGPD4Q7Z3J3 1758 aa22.35■■□□□ 1.17
AP000275.2-202ENST00000553001 DIAPH1O60610 1272 aaKnown RBP22.35■■□□□ 1.17
AP000275.2-202ENST00000553001 NBPF14Q5TI25 921 aa22.35■■□□□ 1.17
AP000275.2-202ENST00000553001 BTAF1O14981 1849 aa22.34■■□□□ 1.17
AP000275.2-202ENST00000553001 DDX10Q13206 875 aaKnown RBP22.34■■□□□ 1.17
AP000275.2-202ENST00000553001 PHKG2P15735 406 aa22.33■■□□□ 1.17
AP000275.2-202ENST00000553001 PPP2R1AP30153 589 aa22.33■■□□□ 1.17
AP000275.2-202ENST00000553001 NKX1-1Q15270 411 aaPredicted RBP22.33■■□□□ 1.17
AP000275.2-202ENST00000553001 PLEKHO1Q53GL0 409 aaPredicted RBP22.33■■□□□ 1.17
AP000275.2-202ENST00000553001 IFNL2Q8IZJ0 200 aa22.33■■□□□ 1.17
AP000275.2-202ENST00000553001 HMOX1P09601 288 aa22.32■■□□□ 1.16
AP000275.2-202ENST00000553001 ANO8Q9HCE9 1232 aaPredicted RBP22.32■■□□□ 1.16
AP000275.2-202ENST00000553001 KDRP35968 1356 aa22.32■■□□□ 1.16
AP000275.2-202ENST00000553001 COL3A1P02461 1466 aaPredicted RBP22.31■■□□□ 1.16
AP000275.2-202ENST00000553001 PLEKHG2Q9H7P9 1386 aa22.31■■□□□ 1.16
AP000275.2-202ENST00000553001 KAT6BQ8WYB5 2073 aa22.3■■□□□ 1.16
AP000275.2-202ENST00000553001 AMOTQ4VCS5 1084 aa22.3■■□□□ 1.16
AP000275.2-202ENST00000553001 MPRIPQ6WCQ1 1025 aa22.3■■□□□ 1.16
AP000275.2-202ENST00000553001 ZNF530Q6P9A1 599 aaPredicted RBP22.29■■□□□ 1.16
AP000275.2-202ENST00000553001 U2SURPO15042 1029 aaKnown RBP22.28■■□□□ 1.16
AP000275.2-202ENST00000553001 CFAP53Q96M91 514 aa22.28■■□□□ 1.16
AP000275.2-202ENST00000553001 LRRC4BQ9NT99 713 aa22.28■■□□□ 1.16
AP000275.2-202ENST00000553001 KCNQ4P56696 695 aa22.27■■□□□ 1.16
AP000275.2-202ENST00000553001 TOGARAM1Q9Y4F4 1720 aa22.27■■□□□ 1.16
AP000275.2-202ENST00000553001 PIGBQ92521 554 aa22.26■■□□□ 1.15
AP000275.2-202ENST00000553001 STK32BQ9NY57 414 aa22.25■■□□□ 1.15
AP000275.2-202ENST00000553001 C1orf141Q5JVX7 400 aa22.24■■□□□ 1.15
AP000275.2-202ENST00000553001 SLC27A3Q5K4L6 730 aa22.24■■□□□ 1.15
AP000275.2-202ENST00000553001 SLC15A2Q16348 729 aa22.23■■□□□ 1.15
AP000275.2-202ENST00000553001 DCAF5Q96JK2 942 aa22.23■■□□□ 1.15
AP000275.2-202ENST00000553001 TMOD3Q9NYL9 352 aa22.23■■□□□ 1.15
AP000275.2-202ENST00000553001 HSP90AB1P08238 724 aaKnown RBP22.22■■□□□ 1.15
AP000275.2-202ENST00000553001 CCNL1Q9UK58 526 aaPredicted RBP22.22■■□□□ 1.15
AP000275.2-202ENST00000553001 PALLDQ8WX93 1383 aa22.21■■□□□ 1.15
AP000275.2-202ENST00000553001 KDM6AO15550 1401 aaPredicted RBP22.21■■□□□ 1.15
AP000275.2-202ENST00000553001 ZNF827Q17R98 1081 aa22.2■■□□□ 1.14
AP000275.2-202ENST00000553001 PDGFDQ9GZP0 370 aaPredicted RBP22.2■■□□□ 1.14
AP000275.2-202ENST00000553001 NUDCQ9Y266 331 aa22.2■■□□□ 1.14
AP000275.2-202ENST00000553001 ITGB4P16144 1822 aa22.2■■□□□ 1.14
AP000275.2-202ENST00000553001 ERVV-2B6SEH9 535 aa22.19■■□□□ 1.14
AP000275.2-202ENST00000553001 MTHFSDQ2M296 383 aaKnown RBP22.19■■□□□ 1.14
AP000275.2-202ENST00000553001 SMARCC1Q92922 1105 aaPredicted RBP22.19■■□□□ 1.14
AP000275.2-202ENST00000553001 PAPPAQ13219 1627 aa22.19■■□□□ 1.14
AP000275.2-202ENST00000553001 LY75O60449 1722 aa22.18■■□□□ 1.14
AP000275.2-202ENST00000553001 AKAP4Q5JQC9 854 aa22.18■■□□□ 1.14
AP000275.2-202ENST00000553001 ASAP1Q9ULH1 1129 aa22.18■■□□□ 1.14
AP000275.2-202ENST00000553001 CABP4P57796 275 aa22.17■■□□□ 1.14
AP000275.2-202ENST00000553001 RALBP1Q15311 655 aa22.17■■□□□ 1.14
AP000275.2-202ENST00000553001 AKT1S1Q96B36 256 aa22.17■■□□□ 1.14
AP000275.2-202ENST00000553001 U2AF1L5P0DN76 240 aaPredicted RBP22.16■■□□□ 1.14
AP000275.2-202ENST00000553001 U2AF1Q01081 240 aaKnown RBP eCLIP22.16■■□□□ 1.14
AP000275.2-202ENST00000553001 ATG3Q9NT62 314 aa22.16■■□□□ 1.14
AP000275.2-202ENST00000553001 SRCAPQ6ZRS2 3230 aa22.16■■□□□ 1.14
AP000275.2-202ENST00000553001 PRKAR2BP31323 418 aa22.15■■□□□ 1.14
AP000275.2-202ENST00000553001 RSPH6AQ9H0K4 717 aa22.15■■□□□ 1.14
AP000275.2-202ENST00000553001 LGR6Q9HBX8 967 aa22.15■■□□□ 1.14
AP000275.2-202ENST00000553001 NFATC2IPQ8NCF5 419 aa22.13■■□□□ 1.13
AP000275.2-202ENST00000553001 PHACTR3Q96KR7 559 aa22.13■■□□□ 1.13
AP000275.2-202ENST00000553001 LRP5O75197 1615 aa22.13■■□□□ 1.13
AP000275.2-202ENST00000553001 LOC102724428A0A0B4J2F2 783 aa22.12■■□□□ 1.13
AP000275.2-202ENST00000553001 RNMTO43148 476 aaKnown RBP22.12■■□□□ 1.13
AP000275.2-202ENST00000553001 SIK1P57059 783 aa22.12■■□□□ 1.13
AP000275.2-202ENST00000553001 TFCP2L1Q9NZI6 479 aa22.12■■□□□ 1.13
AP000275.2-202ENST00000553001 ZBTB7AO95365 584 aa22.11■■□□□ 1.13
AP000275.2-202ENST00000553001 CASZ1Q86V15 1759 aa22.1■■□□□ 1.13
AP000275.2-202ENST00000553001 ZNF316A6NFI3 1004 aaPredicted RBP22.1■■□□□ 1.13
AP000275.2-202ENST00000553001 FCHSD2O94868 740 aa22.1■■□□□ 1.13
AP000275.2-202ENST00000553001 GAS2L2Q8NHY3 880 aa22.1■■□□□ 1.13
AP000275.2-202ENST00000553001 SPON1Q9HCB6 807 aa22.1■■□□□ 1.13
AP000275.2-202ENST00000553001 SLC52A2Q9HAB3 445 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 847.4 ms