RNA–Protein interactions for RNA: ENST00000552254.5

CDK4-211, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-211ENST00000552254 PTF1AQ7RTS3 328 aa12.58□□□□□ -0.4
CDK4-211ENST00000552254 TNS4Q8IZW8 715 aa12.58□□□□□ -0.4
CDK4-211ENST00000552254 MTFR1LQ9H019 292 aa12.58□□□□□ -0.4
CDK4-211ENST00000552254 MARCH10Q8NA82 808 aaPredicted RBP12.57□□□□□ -0.4
CDK4-211ENST00000552254 ARXQ96QS3 562 aa12.57□□□□□ -0.4
CDK4-211ENST00000552254 CARD10Q9BWT7 1032 aa12.57□□□□□ -0.4
CDK4-211ENST00000552254 NLRP2Q9NX02 1062 aa12.56□□□□□ -0.4
CDK4-211ENST00000552254 KNSTRNQ9Y448 316 aa12.56□□□□□ -0.4
CDK4-211ENST00000552254 ERBB3P21860 1342 aa12.56□□□□□ -0.4
CDK4-211ENST00000552254 PER1O15534 1290 aaPredicted RBP12.55□□□□□ -0.4
CDK4-211ENST00000552254 SLC15A2Q16348 729 aa12.55□□□□□ -0.4
CDK4-211ENST00000552254 ANKRD24Q8TF21 1146 aa12.55□□□□□ -0.4
CDK4-211ENST00000552254 LTV1Q96GA3 475 aaPredicted RBP12.55□□□□□ -0.4
CDK4-211ENST00000552254 RGPD2P0DJD1 1756 aa12.55□□□□□ -0.4
CDK4-211ENST00000552254 IP6K1Q92551 441 aa12.54□□□□□ -0.4
CDK4-211ENST00000552254 MAP3K19Q56UN5 1328 aa12.54□□□□□ -0.4
CDK4-211ENST00000552254 NSD2O96028 1365 aa12.54□□□□□ -0.4
CDK4-211ENST00000552254 EXOC5O00471 708 aa12.53□□□□□ -0.4
CDK4-211ENST00000552254 RRS1Q15050 365 aaKnown RBP12.53□□□□□ -0.4
CDK4-211ENST00000552254 TXNRD1Q16881 649 aa12.53□□□□□ -0.4
CDK4-211ENST00000552254 AMER1Q5JTC6 1135 aaPredicted RBP12.53□□□□□ -0.4
CDK4-211ENST00000552254 CDCA7Q9BWT1 371 aaPredicted RBP12.53□□□□□ -0.4
CDK4-211ENST00000552254 FAM208AQ9UK61 1670 aaKnown RBP12.52□□□□□ -0.4
CDK4-211ENST00000552254 AMPHP49418 695 aa12.52□□□□□ -0.41
CDK4-211ENST00000552254 HOXC9P31274 260 aa12.51□□□□□ -0.41
CDK4-211ENST00000552254 ACSBG1Q96GR2 724 aa12.51□□□□□ -0.41
CDK4-211ENST00000552254 RTL1A6NKG5 1358 aa12.51□□□□□ -0.41
CDK4-211ENST00000552254 TNS2Q63HR2 1409 aa12.51□□□□□ -0.41
CDK4-211ENST00000552254 IL2RBP14784 551 aa12.5□□□□□ -0.41
CDK4-211ENST00000552254 TNNT2P45379 298 aaPredicted RBP12.5□□□□□ -0.41
CDK4-211ENST00000552254 MORC1Q86VD1 984 aa12.5□□□□□ -0.41
CDK4-211ENST00000552254 EMILIN1Q9Y6C2 1016 aa12.5□□□□□ -0.41
CDK4-211ENST00000552254 KIF24Q5T7B8 1368 aa12.5□□□□□ -0.41
CDK4-211ENST00000552254 MAP3K5Q99683 1374 aa12.5□□□□□ -0.41
CDK4-211ENST00000552254 KAT6BQ8WYB5 2073 aa12.49□□□□□ -0.41
CDK4-211ENST00000552254 NPC1L1Q9UHC9 1359 aa12.49□□□□□ -0.41
CDK4-211ENST00000552254 POLD1P28340 1107 aa12.49□□□□□ -0.41
CDK4-211ENST00000552254 POLKQ9UBT6 870 aa12.49□□□□□ -0.41
CDK4-211ENST00000552254 FLT4P35916 1363 aa12.48□□□□□ -0.41
CDK4-211ENST00000552254 CC2D1BQ5T0F9 858 aaKnown RBP12.48□□□□□ -0.41
CDK4-211ENST00000552254 PROM2Q8N271 834 aa12.48□□□□□ -0.41
CDK4-211ENST00000552254 NHSQ6T4R5 1651 aa12.48□□□□□ -0.41
CDK4-211ENST00000552254 INSRP06213 1382 aa12.47□□□□□ -0.41
CDK4-211ENST00000552254 HSP90AB2PQ58FF8 381 aa12.47□□□□□ -0.41
CDK4-211ENST00000552254 SGIP1Q9BQI5 828 aa12.47□□□□□ -0.41
CDK4-211ENST00000552254 BCL9O00512 1426 aa12.46□□□□□ -0.41
CDK4-211ENST00000552254 BTAF1O14981 1849 aa12.46□□□□□ -0.41
CDK4-211ENST00000552254 PPM1GO15355 546 aaPredicted RBP12.46□□□□□ -0.41
CDK4-211ENST00000552254 USHBP1Q8N6Y0 703 aa12.46□□□□□ -0.41
CDK4-211ENST00000552254 DDX54Q8TDD1 881 aaKnown RBP12.46□□□□□ -0.41
CDK4-211ENST00000552254 GPBP1L1Q9HC44 474 aaPredicted RBP12.46□□□□□ -0.41
CDK4-211ENST00000552254 SMG6Q86US8 1419 aaKnown RBP12.45□□□□□ -0.42
CDK4-211ENST00000552254 ATP10DQ9P241 1426 aa12.45□□□□□ -0.42
CDK4-211ENST00000552254 MEGF6O75095 1541 aa12.44□□□□□ -0.42
CDK4-211ENST00000552254 GRIN3BO60391 1043 aa12.44□□□□□ -0.42
CDK4-211ENST00000552254 DDX10Q13206 875 aaKnown RBP12.44□□□□□ -0.42
CDK4-211ENST00000552254 CNGB1Q14028 1251 aaPredicted RBP12.44□□□□□ -0.42
CDK4-211ENST00000552254 NBPF6Q5VWK0 638 aa12.44□□□□□ -0.42
CDK4-211ENST00000552254 ZNF526Q8TF50 670 aaPredicted RBP12.44□□□□□ -0.42
CDK4-211ENST00000552254 NBPF4Q96M43 638 aa12.44□□□□□ -0.42
CDK4-211ENST00000552254 PAPPAQ13219 1627 aa12.44□□□□□ -0.42
CDK4-211ENST00000552254 DOT1LQ8TEK3 1739 aa12.43□□□□□ -0.42
CDK4-211ENST00000552254 ZNF316A6NFI3 1004 aaPredicted RBP12.41□□□□□ -0.42
CDK4-211ENST00000552254 APLP1P51693 650 aa12.41□□□□□ -0.42
CDK4-211ENST00000552254 QSER1Q2KHR3 1735 aa12.41□□□□□ -0.42
CDK4-211ENST00000552254 DNAJC5GQ8N7S2 189 aa12.41□□□□□ -0.42
CDK4-211ENST00000552254 NLGN2Q8NFZ4 835 aa12.41□□□□□ -0.42
CDK4-211ENST00000552254 MTHFSP49914 203 aa12.4□□□□□ -0.42
CDK4-211ENST00000552254 EIF4A2Q14240 407 aaKnown RBP12.4□□□□□ -0.42
CDK4-211ENST00000552254 ZNF827Q17R98 1081 aa12.4□□□□□ -0.42
CDK4-211ENST00000552254 ZCRB1Q8TBF4 217 aaKnown RBP12.4□□□□□ -0.42
CDK4-211ENST00000552254 SLC16A10Q8TF71 515 aa12.4□□□□□ -0.42
CDK4-211ENST00000552254 SYTL4Q96C24 671 aaPredicted RBP12.4□□□□□ -0.42
CDK4-211ENST00000552254 NCAPD2Q15021 1401 aa12.39□□□□□ -0.43
CDK4-211ENST00000552254 KCNQ4P56696 695 aa12.39□□□□□ -0.43
CDK4-211ENST00000552254 WDR90Q96KV7 1748 aa12.39□□□□□ -0.43
CDK4-211ENST00000552254 MSH5O43196 834 aa12.38□□□□□ -0.43
CDK4-211ENST00000552254 PRIM1P49642 420 aaKnown RBP12.38□□□□□ -0.43
CDK4-211ENST00000552254 EYA1Q99502 592 aa12.38□□□□□ -0.43
CDK4-211ENST00000552254 LRRC4BQ9NT99 713 aa12.38□□□□□ -0.43
CDK4-211ENST00000552254 WWC3Q9ULE0 1092 aa12.38□□□□□ -0.43
CDK4-211ENST00000552254 TUBGCP6Q96RT7 1819 aa12.37□□□□□ -0.43
CDK4-211ENST00000552254 YBX3P16989 372 aaKnown RBP eCLIP12.37□□□□□ -0.432e-7■□□□□ 9.7
CDK4-211ENST00000552254 RAPGEF4Q8WZA2 1011 aa12.37□□□□□ -0.43
CDK4-211ENST00000552254 TFCP2L1Q9NZI6 479 aa12.37□□□□□ -0.43
CDK4-211ENST00000552254 PDE4DIPQ5VU43 2346 aa12.37□□□□□ -0.43
CDK4-211ENST00000552254 PKD1L3Q7Z443 1732 aa12.37□□□□□ -0.43
CDK4-211ENST00000552254 TATP17735 454 aaPredicted RBP12.36□□□□□ -0.43
CDK4-211ENST00000552254 PPP2R1AP30153 589 aa12.36□□□□□ -0.43
CDK4-211ENST00000552254 IL13P35225 146 aa12.36□□□□□ -0.43
CDK4-211ENST00000552254 IGSF1Q8N6C5 1336 aa12.36□□□□□ -0.43
CDK4-211ENST00000552254 COL3A1P02461 1466 aaPredicted RBP12.35□□□□□ -0.43
CDK4-211ENST00000552254 LY75O60449 1722 aa12.35□□□□□ -0.43
CDK4-211ENST00000552254 COL24A1Q17RW2 1714 aa12.35□□□□□ -0.43
CDK4-211ENST00000552254 ITGB4P16144 1822 aa12.34□□□□□ -0.43
CDK4-211ENST00000552254 PNPLA7Q6ZV29 1317 aa12.34□□□□□ -0.43
CDK4-211ENST00000552254 TOGARAM1Q9Y4F4 1720 aa12.34□□□□□ -0.43
CDK4-211ENST00000552254 CYP27B1O15528 508 aa12.33□□□□□ -0.44
CDK4-211ENST00000552254 DIAPH1O60610 1272 aaKnown RBP12.33□□□□□ -0.44
CDK4-211ENST00000552254 RALBP1Q15311 655 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms