RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 NLRP2Q9NX02 1062 aa23.61■■□□□ 1.37
CDK4-208ENST00000551706 TNNT2P45379 298 aaPredicted RBP23.6■■□□□ 1.37
CDK4-208ENST00000551706 DDB1Q16531 1140 aa23.6■■□□□ 1.37
CDK4-208ENST00000551706 PTF1AQ7RTS3 328 aa23.6■■□□□ 1.37
CDK4-208ENST00000551706 EMILIN1Q9Y6C2 1016 aa23.6■■□□□ 1.37
CDK4-208ENST00000551706 INSRP06213 1382 aa23.6■■□□□ 1.37
CDK4-208ENST00000551706 SMG6Q86US8 1419 aaKnown RBP23.59■■□□□ 1.37
CDK4-208ENST00000551706 LTV1Q96GA3 475 aaPredicted RBP23.59■■□□□ 1.37
CDK4-208ENST00000551706 STK32BQ9NY57 414 aa23.59■■□□□ 1.37
CDK4-208ENST00000551706 POLKQ9UBT6 870 aa23.59■■□□□ 1.37
CDK4-208ENST00000551706 LRRC37A3O60309 1634 aa23.59■■□□□ 1.37
CDK4-208ENST00000551706 PPM1GO15355 546 aaPredicted RBP23.58■■□□□ 1.37
CDK4-208ENST00000551706 HSP90AB2PQ58FF8 381 aa23.57■■□□□ 1.36
CDK4-208ENST00000551706 SLC15A2Q16348 729 aa23.56■■□□□ 1.36
CDK4-208ENST00000551706 CC2D1BQ5T0F9 858 aaKnown RBP23.56■■□□□ 1.36
CDK4-208ENST00000551706 MTFR1LQ9H019 292 aa23.56■■□□□ 1.36
CDK4-208ENST00000551706 FAM208AQ9UK61 1670 aaKnown RBP23.55■■□□□ 1.36
CDK4-208ENST00000551706 GIGYF1O75420 1035 aaPredicted RBP23.53■■□□□ 1.36
CDK4-208ENST00000551706 TXNRD1Q16881 649 aa23.53■■□□□ 1.36
CDK4-208ENST00000551706 SGIP1Q9BQI5 828 aa23.53■■□□□ 1.36
CDK4-208ENST00000551706 BCL9O00512 1426 aa23.51■■□□□ 1.35
CDK4-208ENST00000551706 IL2RBP14784 551 aa23.51■■□□□ 1.35
CDK4-208ENST00000551706 MARCH10Q8NA82 808 aaPredicted RBP23.51■■□□□ 1.35
CDK4-208ENST00000551706 CEP350Q5VT06 3117 aa23.5■■□□□ 1.35
CDK4-208ENST00000551706 ARXQ96QS3 562 aa23.5■■□□□ 1.35
CDK4-208ENST00000551706 MAP2P11137 1827 aaKnown RBP23.49■■□□□ 1.35
CDK4-208ENST00000551706 EXOC5O00471 708 aa23.48■■□□□ 1.35
CDK4-208ENST00000551706 NBPF6Q5VWK0 638 aa23.48■■□□□ 1.35
CDK4-208ENST00000551706 NBPF4Q96M43 638 aa23.48■■□□□ 1.35
CDK4-208ENST00000551706 MAP3K5Q99683 1374 aa23.48■■□□□ 1.35
CDK4-208ENST00000551706 GPR162Q16538 588 aa23.47■■□□□ 1.35
CDK4-208ENST00000551706 WNK3Q9BYP7 1800 aa23.46■■□□□ 1.35
CDK4-208ENST00000551706 TNS2Q63HR2 1409 aa23.45■■□□□ 1.34
CDK4-208ENST00000551706 CNGB1Q14028 1251 aaPredicted RBP23.45■■□□□ 1.34
CDK4-208ENST00000551706 MTHFSP49914 203 aa23.44■■□□□ 1.34
CDK4-208ENST00000551706 DDX10Q13206 875 aaKnown RBP23.44■■□□□ 1.34
CDK4-208ENST00000551706 EIF4A2Q14240 407 aaKnown RBP23.44■■□□□ 1.34
CDK4-208ENST00000551706 RAPGEF4Q8WZA2 1011 aa23.43■■□□□ 1.34
CDK4-208ENST00000551706 USHBP1Q8N6Y0 703 aa23.41■■□□□ 1.34
CDK4-208ENST00000551706 NCAPD2Q15021 1401 aa23.41■■□□□ 1.34
CDK4-208ENST00000551706 EYA1Q99502 592 aa23.4■■□□□ 1.34
CDK4-208ENST00000551706 TATP17735 454 aaPredicted RBP23.39■■□□□ 1.33
CDK4-208ENST00000551706 RGPD2P0DJD1 1756 aa23.38■■□□□ 1.33
CDK4-208ENST00000551706 MEGF6O75095 1541 aa23.38■■□□□ 1.33
CDK4-208ENST00000551706 GOLGB1Q14789 3259 aaKnown RBP23.37■■□□□ 1.33
CDK4-208ENST00000551706 ZNF316A6NFI3 1004 aaPredicted RBP23.37■■□□□ 1.33
CDK4-208ENST00000551706 IGSF1Q8N6C5 1336 aa23.36■■□□□ 1.33
CDK4-208ENST00000551706 ZCRB1Q8TBF4 217 aaKnown RBP23.36■■□□□ 1.33
CDK4-208ENST00000551706 PAPPAQ13219 1627 aa23.35■■□□□ 1.33
CDK4-208ENST00000551706 IL13P35225 146 aa23.35■■□□□ 1.33
CDK4-208ENST00000551706 PELP1Q8IZL8 1130 aaKnown RBP23.35■■□□□ 1.33
CDK4-208ENST00000551706 KLHL34Q8N239 644 aa23.35■■□□□ 1.33
CDK4-208ENST00000551706 SHANK3Q9BYB0 1731 aa23.35■■□□□ 1.33
CDK4-208ENST00000551706 PLEKHG2Q9H7P9 1386 aa23.35■■□□□ 1.33
CDK4-208ENST00000551706 PPP2R1AP30153 589 aa23.34■■□□□ 1.33
CDK4-208ENST00000551706 NHSQ6T4R5 1651 aa23.33■■□□□ 1.33
CDK4-208ENST00000551706 DIAPH1O60610 1272 aaKnown RBP23.33■■□□□ 1.33
CDK4-208ENST00000551706 CFAP53Q96M91 514 aa23.33■■□□□ 1.33
CDK4-208ENST00000551706 DDX54Q8TDD1 881 aaKnown RBP23.32■■□□□ 1.32
CDK4-208ENST00000551706 RALBP1Q15311 655 aa23.31■■□□□ 1.32
CDK4-208ENST00000551706 ZNF827Q17R98 1081 aa23.31■■□□□ 1.32
CDK4-208ENST00000551706 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.31■■□□□ 1.32
CDK4-208ENST00000551706 POLD1P28340 1107 aa23.3■■□□□ 1.32
CDK4-208ENST00000551706 ACSBG1Q96GR2 724 aa23.3■■□□□ 1.32
CDK4-208ENST00000551706 SPG7Q9UQ90 795 aa23.3■■□□□ 1.32
CDK4-208ENST00000551706 PCDH11XQ9BZA7 1347 aa23.3■■□□□ 1.32
CDK4-208ENST00000551706 PCDH11YQ9BZA8 1340 aa23.3■■□□□ 1.32
CDK4-208ENST00000551706 SLC16A10Q8TF71 515 aa23.29■■□□□ 1.32
CDK4-208ENST00000551706 SULT6B1Q6IMI4 303 aa23.28■■□□□ 1.32
CDK4-208ENST00000551706 KDRP35968 1356 aa23.27■■□□□ 1.32
CDK4-208ENST00000551706 COL3A1P02461 1466 aaPredicted RBP23.27■■□□□ 1.32
CDK4-208ENST00000551706 NLGN2Q8NFZ4 835 aa23.25■■□□□ 1.31
CDK4-208ENST00000551706 LRRC4BQ9NT99 713 aa23.25■■□□□ 1.31
CDK4-208ENST00000551706 BTAF1O14981 1849 aa23.24■■□□□ 1.31
CDK4-208ENST00000551706 GRIN3BO60391 1043 aa23.24■■□□□ 1.31
CDK4-208ENST00000551706 AEBP1Q8IUX7 1158 aa23.24■■□□□ 1.31
CDK4-208ENST00000551706 NUDCQ9Y266 331 aa23.24■■□□□ 1.31
CDK4-208ENST00000551706 COL24A1Q17RW2 1714 aa23.23■■□□□ 1.31
CDK4-208ENST00000551706 AMOTQ4VCS5 1084 aa23.23■■□□□ 1.31
CDK4-208ENST00000551706 PLEKHO1Q53GL0 409 aaPredicted RBP23.23■■□□□ 1.31
CDK4-208ENST00000551706 QSER1Q2KHR3 1735 aa23.22■■□□□ 1.31
CDK4-208ENST00000551706 PKD1L3Q7Z443 1732 aa23.22■■□□□ 1.31
CDK4-208ENST00000551706 U2SURPO15042 1029 aaKnown RBP23.22■■□□□ 1.31
CDK4-208ENST00000551706 CYP27B1O15528 508 aa23.22■■□□□ 1.31
CDK4-208ENST00000551706 AKT1S1Q96B36 256 aa23.22■■□□□ 1.31
CDK4-208ENST00000551706 PNPLA7Q6ZV29 1317 aa23.2■■□□□ 1.3
CDK4-208ENST00000551706 HMOX1P09601 288 aa23.2■■□□□ 1.3
CDK4-208ENST00000551706 YBX3P16989 372 aaKnown RBP eCLIP23.2■■□□□ 1.34e-7■□□□□ 10
CDK4-208ENST00000551706 IFNL2Q8IZJ0 200 aa23.2■■□□□ 1.3
CDK4-208ENST00000551706 ATP10DQ9P241 1426 aa23.19■■□□□ 1.3
CDK4-208ENST00000551706 MYBBP1AQ9BQG0 1328 aaKnown RBP23.19■■□□□ 1.3
CDK4-208ENST00000551706 HSPA6P17066 643 aa23.19■■□□□ 1.3
CDK4-208ENST00000551706 NKX1-1Q15270 411 aaPredicted RBP23.18■■□□□ 1.3
CDK4-208ENST00000551706 SLC27A3Q5K4L6 730 aa23.18■■□□□ 1.3
CDK4-208ENST00000551706 KAT6BQ8WYB5 2073 aa23.17■■□□□ 1.3
CDK4-208ENST00000551706 PHKG2P15735 406 aa23.17■■□□□ 1.3
CDK4-208ENST00000551706 PRKRIP1Q9H875 184 aaPredicted RBP23.17■■□□□ 1.3
CDK4-208ENST00000551706 GPBP1L1Q9HC44 474 aaPredicted RBP23.17■■□□□ 1.3
CDK4-208ENST00000551706 HSP90AB1P08238 724 aaKnown RBP23.16■■□□□ 1.3
CDK4-208ENST00000551706 PRIM1P49642 420 aaKnown RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 179.9 ms