RNA–Protein interactions for RNA: ENST00000551406.5

PPHLN1-216, Transcript of periphilin 1, humanhuman

TSL 2

Gene PPHLN1, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPHLN1-216ENST00000551406 IGSF1Q8N6C5 1336 aa17■□□□□ 0.31
PPHLN1-216ENST00000551406 ZCRB1Q8TBF4 217 aaKnown RBP17■□□□□ 0.31
PPHLN1-216ENST00000551406 SHANK3Q9BYB0 1731 aa17■□□□□ 0.31
PPHLN1-216ENST00000551406 SBF2Q86WG5 1849 aa16.99■□□□□ 0.31
PPHLN1-216ENST00000551406 TATP17735 454 aaPredicted RBP16.99■□□□□ 0.31
PPHLN1-216ENST00000551406 IL13P35225 146 aa16.99■□□□□ 0.31
PPHLN1-216ENST00000551406 DDX54Q8TDD1 881 aaKnown RBP16.99■□□□□ 0.31
PPHLN1-216ENST00000551406 BAG6P46379 1132 aa16.98■□□□□ 0.31
PPHLN1-216ENST00000551406 EN1Q05925 392 aaPredicted RBP16.98■□□□□ 0.31
PPHLN1-216ENST00000551406 DDX10Q13206 875 aaKnown RBP16.98■□□□□ 0.31
PPHLN1-216ENST00000551406 KCNQ2O43526 872 aa16.97■□□□□ 0.31
PPHLN1-216ENST00000551406 APBA3O96018 575 aa16.97■□□□□ 0.31
PPHLN1-216ENST00000551406 BCL11BQ9C0K0 894 aaPredicted RBP16.97■□□□□ 0.31
PPHLN1-216ENST00000551406 CAMKK2Q96RR4 588 aa16.96■□□□□ 0.31
PPHLN1-216ENST00000551406 COL3A1P02461 1466 aaPredicted RBP16.96■□□□□ 0.31
PPHLN1-216ENST00000551406 AEBP1Q8IUX7 1158 aa16.95■□□□□ 0.3
PPHLN1-216ENST00000551406 ACSBG1Q96GR2 724 aa16.95■□□□□ 0.3
PPHLN1-216ENST00000551406 PKD1L3Q7Z443 1732 aa16.95■□□□□ 0.3
PPHLN1-216ENST00000551406 CYP27B1O15528 508 aa16.94■□□□□ 0.3
PPHLN1-216ENST00000551406 PPP2R1AP30153 589 aa16.94■□□□□ 0.3
PPHLN1-216ENST00000551406 EZH2Q15910 746 aaKnown RBP16.94■□□□□ 0.3
PPHLN1-216ENST00000551406 PCDH11XQ9BZA7 1347 aa16.94■□□□□ 0.3
PPHLN1-216ENST00000551406 PCDH11YQ9BZA8 1340 aa16.94■□□□□ 0.3
PPHLN1-216ENST00000551406 KDRP35968 1356 aa16.93■□□□□ 0.3
PPHLN1-216ENST00000551406 PARD3Q8TEW0 1356 aa16.93■□□□□ 0.3
PPHLN1-216ENST00000551406 NHSQ6T4R5 1651 aa16.93■□□□□ 0.3
PPHLN1-216ENST00000551406 DIAPH1O60610 1272 aaKnown RBP16.92■□□□□ 0.3
PPHLN1-216ENST00000551406 SULT6B1Q6IMI4 303 aa16.92■□□□□ 0.3
PPHLN1-216ENST00000551406 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.92■□□□□ 0.38e-7■□□□□ 8.8
PPHLN1-216ENST00000551406 PLEKHG2Q9H7P9 1386 aa16.91■□□□□ 0.3
PPHLN1-216ENST00000551406 SPG7Q9UQ90 795 aa16.91■□□□□ 0.3
PPHLN1-216ENST00000551406 PLSCR1O15162 318 aa16.9■□□□□ 0.3
PPHLN1-216ENST00000551406 PRIM1P49642 420 aaKnown RBP16.89■□□□□ 0.29
PPHLN1-216ENST00000551406 DOT1LQ8TEK3 1739 aa16.89■□□□□ 0.29
PPHLN1-216ENST00000551406 HMOX1P09601 288 aa16.88■□□□□ 0.29
PPHLN1-216ENST00000551406 NKX1-1Q15270 411 aaPredicted RBP16.88■□□□□ 0.29
PPHLN1-216ENST00000551406 PROM2Q8N271 834 aa16.88■□□□□ 0.29
PPHLN1-216ENST00000551406 RREB1Q92766 1687 aa16.88■□□□□ 0.29
PPHLN1-216ENST00000551406 RGPD3A6NKT7 1758 aaPredicted RBP16.87■□□□□ 0.29
PPHLN1-216ENST00000551406 RGPD4Q7Z3J3 1758 aa16.87■□□□□ 0.29
PPHLN1-216ENST00000551406 PHKG2P15735 406 aa16.87■□□□□ 0.29
PPHLN1-216ENST00000551406 BTAF1O14981 1849 aa16.86■□□□□ 0.29
PPHLN1-216ENST00000551406 ZNF316A6NFI3 1004 aaPredicted RBP16.86■□□□□ 0.29
PPHLN1-216ENST00000551406 SYTL4Q96C24 671 aaPredicted RBP16.86■□□□□ 0.29
PPHLN1-216ENST00000551406 CFAP53Q96M91 514 aa16.86■□□□□ 0.29
PPHLN1-216ENST00000551406 TOGARAM1Q9Y4F4 1720 aa16.86■□□□□ 0.29
PPHLN1-216ENST00000551406 U2SURPO15042 1029 aaKnown RBP16.85■□□□□ 0.29
PPHLN1-216ENST00000551406 RALBP1Q15311 655 aa16.85■□□□□ 0.29
PPHLN1-216ENST00000551406 AMOTQ4VCS5 1084 aa16.85■□□□□ 0.29
PPHLN1-216ENST00000551406 PLEKHO1Q53GL0 409 aaPredicted RBP16.85■□□□□ 0.29
PPHLN1-216ENST00000551406 IFNL2Q8IZJ0 200 aa16.85■□□□□ 0.29
PPHLN1-216ENST00000551406 SRCAPQ6ZRS2 3230 aa16.85■□□□□ 0.29
PPHLN1-216ENST00000551406 NUP188Q5SRE5 1749 aa16.84■□□□□ 0.29
PPHLN1-216ENST00000551406 KAT6BQ8WYB5 2073 aa16.84■□□□□ 0.29
PPHLN1-216ENST00000551406 TXNRD1Q16881 649 aa16.83■□□□□ 0.28
PPHLN1-216ENST00000551406 ZNF530Q6P9A1 599 aaPredicted RBP16.83■□□□□ 0.28
PPHLN1-216ENST00000551406 MPRIPQ6WCQ1 1025 aa16.81■□□□□ 0.28
PPHLN1-216ENST00000551406 KDM6AO15550 1401 aaPredicted RBP16.8■□□□□ 0.28
PPHLN1-216ENST00000551406 PIGBQ92521 554 aa16.8■□□□□ 0.28
PPHLN1-216ENST00000551406 DCAF5Q96JK2 942 aa16.8■□□□□ 0.28
PPHLN1-216ENST00000551406 RSPH6AQ9H0K4 717 aa16.8■□□□□ 0.28
PPHLN1-216ENST00000551406 NUDCQ9Y266 331 aa16.8■□□□□ 0.28
PPHLN1-216ENST00000551406 PSDA5PKW4 1024 aaPredicted RBP16.79■□□□□ 0.28
PPHLN1-216ENST00000551406 R3HDM1Q15032 1099 aaKnown RBP16.79■□□□□ 0.28
PPHLN1-216ENST00000551406 MTHFSDQ2M296 383 aaKnown RBP16.79■□□□□ 0.28
PPHLN1-216ENST00000551406 PRKRIP1Q9H875 184 aaPredicted RBP16.79■□□□□ 0.28
PPHLN1-216ENST00000551406 ANO8Q9HCE9 1232 aaPredicted RBP16.79■□□□□ 0.28
PPHLN1-216ENST00000551406 LRRC4BQ9NT99 713 aa16.79■□□□□ 0.28
PPHLN1-216ENST00000551406 ITGB4P16144 1822 aa16.79■□□□□ 0.28
PPHLN1-216ENST00000551406 MYBBP1AQ9BQG0 1328 aaKnown RBP16.78■□□□□ 0.28
PPHLN1-216ENST00000551406 HSP90AB1P08238 724 aaKnown RBP16.78■□□□□ 0.28
PPHLN1-216ENST00000551406 U2AF1L5P0DN76 240 aaPredicted RBP16.78■□□□□ 0.28
PPHLN1-216ENST00000551406 U2AF1Q01081 240 aaKnown RBP eCLIP16.78■□□□□ 0.28
PPHLN1-216ENST00000551406 C1orf141Q5JVX7 400 aa16.78■□□□□ 0.28
PPHLN1-216ENST00000551406 PRKAR2BP31323 418 aa16.77■□□□□ 0.28
PPHLN1-216ENST00000551406 AKAP4Q5JQC9 854 aa16.77■□□□□ 0.28
PPHLN1-216ENST00000551406 PHACTR3Q96KR7 559 aa16.77■□□□□ 0.28
PPHLN1-216ENST00000551406 ERVV-2B6SEH9 535 aa16.76■□□□□ 0.27
PPHLN1-216ENST00000551406 KCNQ4P56696 695 aa16.76■□□□□ 0.27
PPHLN1-216ENST00000551406 NBPF14Q5TI25 921 aa16.76■□□□□ 0.27
PPHLN1-216ENST00000551406 TMOD3Q9NYL9 352 aa16.76■□□□□ 0.27
PPHLN1-216ENST00000551406 LY75O60449 1722 aa16.76■□□□□ 0.27
PPHLN1-216ENST00000551406 PAPPAQ13219 1627 aa16.75■□□□□ 0.27
PPHLN1-216ENST00000551406 FCHSD2O94868 740 aa16.75■□□□□ 0.27
PPHLN1-216ENST00000551406 SLC27A3Q5K4L6 730 aa16.75■□□□□ 0.27
PPHLN1-216ENST00000551406 PALLDQ8WX93 1383 aa16.75■□□□□ 0.27
PPHLN1-216ENST00000551406 LGR6Q9HBX8 967 aa16.74■□□□□ 0.27
PPHLN1-216ENST00000551406 ASAP1Q9ULH1 1129 aa16.74■□□□□ 0.27
PPHLN1-216ENST00000551406 CABP4P57796 275 aa16.72■□□□□ 0.27
PPHLN1-216ENST00000551406 ZNF827Q17R98 1081 aa16.72■□□□□ 0.27
PPHLN1-216ENST00000551406 SMARCC1Q92922 1105 aaPredicted RBP16.72■□□□□ 0.27
PPHLN1-216ENST00000551406 ATG3Q9NT62 314 aa16.72■□□□□ 0.27
PPHLN1-216ENST00000551406 CCNL1Q9UK58 526 aaPredicted RBP16.72■□□□□ 0.27
PPHLN1-216ENST00000551406 ADAMTS7Q9UKP4 1686 aa16.72■□□□□ 0.27
PPHLN1-216ENST00000551406 SCN11AQ9UI33 1791 aa16.72■□□□□ 0.27
PPHLN1-216ENST00000551406 RNMTO43148 476 aaKnown RBP16.71■□□□□ 0.27
PPHLN1-216ENST00000551406 SLC15A2Q16348 729 aa16.71■□□□□ 0.27
PPHLN1-216ENST00000551406 NFATC2IPQ8NCF5 419 aa16.71■□□□□ 0.27
PPHLN1-216ENST00000551406 GAS2L2Q8NHY3 880 aa16.71■□□□□ 0.27
PPHLN1-216ENST00000551406 MRC1P22897 1456 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms