RNA–Protein interactions for RNA: ENST00000551179.1

CNOT2-229, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 355 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-229ENST00000551179 NOP58Q9Y2X3 529 aaKnown RBP12.98□□□□□ -0.33
CNOT2-229ENST00000551179 MAP3K19Q56UN5 1328 aa12.97□□□□□ -0.33
CNOT2-229ENST00000551179 PIK3C2AO00443 1686 aa12.97□□□□□ -0.33
CNOT2-229ENST00000551179 FBLN1P23142 703 aa12.97□□□□□ -0.33
CNOT2-229ENST00000551179 RGS3P49796 1198 aa12.97□□□□□ -0.33
CNOT2-229ENST00000551179 SSH1Q8WYL5 1049 aa12.97□□□□□ -0.33
CNOT2-229ENST00000551179 IPO9Q96P70 1041 aaKnown RBP12.97□□□□□ -0.33
CNOT2-229ENST00000551179 API5Q9BZZ5 524 aaKnown RBP12.97□□□□□ -0.33
CNOT2-229ENST00000551179 DAXXQ9UER7 740 aaPredicted RBP12.97□□□□□ -0.33
CNOT2-229ENST00000551179 NWD1Q149M9 1564 aa12.97□□□□□ -0.33
CNOT2-229ENST00000551179 BRPF1P55201 1214 aaPredicted RBP12.96□□□□□ -0.33
CNOT2-229ENST00000551179 NPM2Q86SE8 214 aaKnown RBP12.96□□□□□ -0.33
CNOT2-229ENST00000551179 ABTB2Q8N961 1025 aa12.96□□□□□ -0.33
CNOT2-229ENST00000551179 TRIM27P14373 513 aa12.95□□□□□ -0.34
CNOT2-229ENST00000551179 TWISTNBQ3B726 338 aaPredicted RBP12.95□□□□□ -0.34
CNOT2-229ENST00000551179 KCNH5Q8NCM2 988 aa12.95□□□□□ -0.34
CNOT2-229ENST00000551179 ARHGAP45Q92619 1136 aa12.95□□□□□ -0.34
CNOT2-229ENST00000551179 PHACTR3Q96KR7 559 aa12.95□□□□□ -0.34
CNOT2-229ENST00000551179 UPF2Q9HAU5 1272 aaKnown RBP12.95□□□□□ -0.34
CNOT2-229ENST00000551179 NOB1Q9ULX3 412 aaKnown RBP12.95□□□□□ -0.34
CNOT2-229ENST00000551179 RGPD1P0DJD0 1748 aa12.94□□□□□ -0.34
CNOT2-229ENST00000551179 PEAK1Q9H792 1746 aa12.94□□□□□ -0.34
CNOT2-229ENST00000551179 PSME1Q06323 249 aa12.94□□□□□ -0.34
CNOT2-229ENST00000551179 MBIPQ9NS73 344 aa12.94□□□□□ -0.34
CNOT2-229ENST00000551179 KIF1AQ12756 1690 aa12.93□□□□□ -0.34
CNOT2-229ENST00000551179 HAX1O00165 279 aa12.93□□□□□ -0.34
CNOT2-229ENST00000551179 HSP90AB2PQ58FF8 381 aa12.93□□□□□ -0.34
CNOT2-229ENST00000551179 RGPD8O14715 1765 aaPredicted RBP12.93□□□□□ -0.34
CNOT2-229ENST00000551179 IGSF1Q8N6C5 1336 aa12.92□□□□□ -0.34
CNOT2-229ENST00000551179 HTATSF1O43719 755 aaKnown RBP12.92□□□□□ -0.34
CNOT2-229ENST00000551179 ZNF853P0CG23 659 aa12.92□□□□□ -0.34
CNOT2-229ENST00000551179 RLBP1P12271 317 aa12.92□□□□□ -0.34
CNOT2-229ENST00000551179 ESCO1Q5FWF5 840 aa12.92□□□□□ -0.34
CNOT2-229ENST00000551179 KIAA0232Q92628 1395 aa12.92□□□□□ -0.34
CNOT2-229ENST00000551179 THUMPD2Q9BTF0 503 aaKnown RBP12.91□□□□□ -0.34
CNOT2-229ENST00000551179 CHMP4AQ9BY43 222 aa12.91□□□□□ -0.34
CNOT2-229ENST00000551179 DLG5Q8TDM6 1919 aa12.91□□□□□ -0.34
CNOT2-229ENST00000551179 KDRP35968 1356 aa12.91□□□□□ -0.34
CNOT2-229ENST00000551179 VAMP4O75379 141 aa12.9□□□□□ -0.34
CNOT2-229ENST00000551179 HOXC9P31274 260 aa12.9□□□□□ -0.34
CNOT2-229ENST00000551179 HDAC1Q13547 482 aaPredicted RBP12.9□□□□□ -0.34
CNOT2-229ENST00000551179 AEBP1Q8IUX7 1158 aa12.9□□□□□ -0.34
CNOT2-229ENST00000551179 TMEM57Q8N5G2 664 aa12.9□□□□□ -0.34
CNOT2-229ENST00000551179 MRPL50Q8N5N7 158 aaKnown RBP12.9□□□□□ -0.34
CNOT2-229ENST00000551179 SOS1Q07889 1333 aaPredicted RBP12.89□□□□□ -0.35
CNOT2-229ENST00000551179 IGHDP01880 384 aa12.89□□□□□ -0.35
CNOT2-229ENST00000551179 PROSER2Q86WR7 435 aaPredicted RBP12.89□□□□□ -0.35
CNOT2-229ENST00000551179 SPOCK2Q92563 424 aa12.89□□□□□ -0.35
CNOT2-229ENST00000551179 TSPYL4Q9UJ04 414 aa12.89□□□□□ -0.35
CNOT2-229ENST00000551179 PTPRCP08575 1304 aa12.88□□□□□ -0.35
CNOT2-229ENST00000551179 NUTM2GQ5VZR2 741 aa12.88□□□□□ -0.35
CNOT2-229ENST00000551179 DNAJC5Q9H3Z4 198 aa12.88□□□□□ -0.35
CNOT2-229ENST00000551179 PLSCR2Q9NRY7 297 aa12.88□□□□□ -0.35
CNOT2-229ENST00000551179 MAP3K5Q99683 1374 aa12.88□□□□□ -0.35
CNOT2-229ENST00000551179 DCCP43146 1447 aa12.88□□□□□ -0.35
CNOT2-229ENST00000551179 FAM83GA6ND36 823 aa12.87□□□□□ -0.35
CNOT2-229ENST00000551179 EIF5BO60841 1220 aaKnown RBP12.87□□□□□ -0.35
CNOT2-229ENST00000551179 EYA1Q99502 592 aa12.87□□□□□ -0.35
CNOT2-229ENST00000551179 STK31Q9BXU1 1019 aa12.87□□□□□ -0.35
CNOT2-229ENST00000551179 TNNQ9UQP3 1299 aa12.87□□□□□ -0.35
CNOT2-229ENST00000551179 PCDHB15Q9Y5E8 787 aa12.87□□□□□ -0.35
CNOT2-229ENST00000551179 NCOA3Q9Y6Q9 1424 aa12.87□□□□□ -0.35
CNOT2-229ENST00000551179 ABCC4O15439 1325 aa12.87□□□□□ -0.35
CNOT2-229ENST00000551179 VIRMAQ69YN4 1812 aaKnown RBP12.86□□□□□ -0.35
CNOT2-229ENST00000551179 ZBTB7CA1YPR0 619 aa12.86□□□□□ -0.35
CNOT2-229ENST00000551179 GNAT3A8MTJ3 354 aa12.86□□□□□ -0.35
CNOT2-229ENST00000551179 CHL1O00533 1208 aa12.86□□□□□ -0.35
CNOT2-229ENST00000551179 ATF3P18847 181 aa12.86□□□□□ -0.35
CNOT2-229ENST00000551179 DCTN1Q14203 1278 aa12.86□□□□□ -0.35
CNOT2-229ENST00000551179 MCM10Q7L590 875 aa12.86□□□□□ -0.35
CNOT2-229ENST00000551179 BABAM1Q9NWV8 329 aa12.86□□□□□ -0.35
CNOT2-229ENST00000551179 PDZRN3Q9UPQ7 1066 aa12.86□□□□□ -0.35
CNOT2-229ENST00000551179 ELL2O00472 640 aaPredicted RBP12.85□□□□□ -0.35
CNOT2-229ENST00000551179 RTL5Q5HYW3 569 aaPredicted RBP12.85□□□□□ -0.35
CNOT2-229ENST00000551179 IP6K1Q92551 441 aa12.85□□□□□ -0.35
CNOT2-229ENST00000551179 GCC1Q96CN9 775 aa12.85□□□□□ -0.35
CNOT2-229ENST00000551179 LTV1Q96GA3 475 aaPredicted RBP12.85□□□□□ -0.35
CNOT2-229ENST00000551179 NFAT5O94916 1531 aa12.84□□□□□ -0.35
CNOT2-229ENST00000551179 NUBP1P53384 320 aa12.84□□□□□ -0.35
CNOT2-229ENST00000551179 MTHFSDQ2M296 383 aaKnown RBP12.84□□□□□ -0.35
CNOT2-229ENST00000551179 C8orf34Q49A92 452 aa12.84□□□□□ -0.35
CNOT2-229ENST00000551179 LMOD2Q6P5Q4 547 aa12.84□□□□□ -0.35
CNOT2-229ENST00000551179 ZBTB40Q9NUA8 1239 aa12.84□□□□□ -0.35
CNOT2-229ENST00000551179 CRB1P82279 1406 aa12.84□□□□□ -0.35
CNOT2-229ENST00000551179 LRRC37A3O60309 1634 aa12.84□□□□□ -0.35
CNOT2-229ENST00000551179 PHRF1Q9P1Y6 1649 aaKnown RBP12.84□□□□□ -0.35
CNOT2-229ENST00000551179 LTN1O94822 1766 aa12.84□□□□□ -0.35
CNOT2-229ENST00000551179 SLIT3O75094 1523 aa12.83□□□□□ -0.35
CNOT2-229ENST00000551179 MARF1Q9Y4F3 1742 aaKnown RBP12.83□□□□□ -0.36
CNOT2-229ENST00000551179 C19orf67A6NJJ6 358 aa12.83□□□□□ -0.36
CNOT2-229ENST00000551179 CD44P16070 742 aaKnown RBP12.83□□□□□ -0.36
CNOT2-229ENST00000551179 TSPYL6Q8N831 410 aa12.83□□□□□ -0.36
CNOT2-229ENST00000551179 C8orf58Q8NAV2 365 aa12.83□□□□□ -0.36
CNOT2-229ENST00000551179 C19orf44Q9H6X5 657 aa12.83□□□□□ -0.36
CNOT2-229ENST00000551179 BECN1Q14457 450 aa12.82□□□□□ -0.36
CNOT2-229ENST00000551179 AMOTQ4VCS5 1084 aa12.82□□□□□ -0.36
CNOT2-229ENST00000551179 CCDC30Q5VVM6 783 aa12.82□□□□□ -0.36
CNOT2-229ENST00000551179 SKAP1Q86WV1 359 aa12.82□□□□□ -0.36
CNOT2-229ENST00000551179 C1orf167Q5SNV9 1468 aa12.82□□□□□ -0.36
CNOT2-229ENST00000551179 NCAPD2Q15021 1401 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms