RNA–Protein interactions for RNA: ENST00000550715.5

LETMD1-225, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 907 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-225ENST00000550715 CD46P15529 392 aa12.11□□□□□ -0.47
LETMD1-225ENST00000550715 MYSM1Q5VVJ2 828 aa12.11□□□□□ -0.47
LETMD1-225ENST00000550715 TBC1D2Q9BYX2 928 aa12.11□□□□□ -0.47
LETMD1-225ENST00000550715 RSPH6AQ9H0K4 717 aa12.11□□□□□ -0.47
LETMD1-225ENST00000550715 MROH1Q8NDA8 1641 aa12.11□□□□□ -0.47
LETMD1-225ENST00000550715 ARHGAP31Q2M1Z3 1444 aa12.11□□□□□ -0.47
LETMD1-225ENST00000550715 SULF1Q8IWU6 871 aa12.1□□□□□ -0.47
LETMD1-225ENST00000550715 RDH13Q8NBN7 331 aa12.1□□□□□ -0.47
LETMD1-225ENST00000550715 ZNF784Q8NCA9 323 aaPredicted RBP12.1□□□□□ -0.47
LETMD1-225ENST00000550715 VPS9D1Q9Y2B5 631 aa12.1□□□□□ -0.47
LETMD1-225ENST00000550715 SKIV2LQ15477 1246 aaKnown RBP12.09□□□□□ -0.47
LETMD1-225ENST00000550715 SWT1Q5T5J6 900 aaKnown RBP12.09□□□□□ -0.47
LETMD1-225ENST00000550715 LCE2DQ5TA82 110 aaPredicted RBP12.09□□□□□ -0.47
LETMD1-225ENST00000550715 PROCA1Q8NCQ7 364 aaPredicted RBP12.09□□□□□ -0.47
LETMD1-225ENST00000550715 SLC4A5Q9BY07 1137 aa12.09□□□□□ -0.47
LETMD1-225ENST00000550715 PPP1R15AO75807 674 aaPredicted RBP12.08□□□□□ -0.48
LETMD1-225ENST00000550715 C1QTNF8P60827 252 aa12.08□□□□□ -0.48
LETMD1-225ENST00000550715 MTUS2Q5JR59 1369 aa12.07□□□□□ -0.48
LETMD1-225ENST00000550715 PLEKHG1Q9ULL1 1385 aa12.07□□□□□ -0.48
LETMD1-225ENST00000550715 MST1RQ04912 1400 aa12.07□□□□□ -0.48
LETMD1-225ENST00000550715 AMOTL2Q9Y2J4 779 aa12.07□□□□□ -0.48
LETMD1-225ENST00000550715 CLK2P49760 499 aaKnown RBP12.06□□□□□ -0.48
LETMD1-225ENST00000550715 SPIRE2Q8WWL2 714 aa12.06□□□□□ -0.48
LETMD1-225ENST00000550715 PTCH1Q13635 1447 aa12.05□□□□□ -0.48
LETMD1-225ENST00000550715 BAG6P46379 1132 aa12.05□□□□□ -0.48
LETMD1-225ENST00000550715 SEPT12Q8IYM1 358 aa12.05□□□□□ -0.48
LETMD1-225ENST00000550715 FYCO1Q9BQS8 1478 aa12.04□□□□□ -0.48
LETMD1-225ENST00000550715 FAM98CQ17RN3 349 aaKnown RBP12.04□□□□□ -0.48
LETMD1-225ENST00000550715 NUTM1Q86Y26 1132 aa12.04□□□□□ -0.48
LETMD1-225ENST00000550715 BRWD3Q6RI45 1802 aa12.04□□□□□ -0.48
LETMD1-225ENST00000550715 LIMD1Q9UGP4 676 aa12.03□□□□□ -0.48
LETMD1-225ENST00000550715 ZFYVE9O95405 1425 aa12.03□□□□□ -0.48
LETMD1-225ENST00000550715 ADAMTS13Q76LX8 1427 aa12.03□□□□□ -0.48
LETMD1-225ENST00000550715 PTPRUQ92729 1446 aa12.03□□□□□ -0.48
LETMD1-225ENST00000550715 CEP350Q5VT06 3117 aa12.02□□□□□ -0.49
LETMD1-225ENST00000550715 SOS2Q07890 1332 aaPredicted RBP12.02□□□□□ -0.49
LETMD1-225ENST00000550715 RALGAPBQ86X10 1494 aa12.02□□□□□ -0.49
LETMD1-225ENST00000550715 RNF40O75150 1001 aa12.01□□□□□ -0.49
LETMD1-225ENST00000550715 HDGFP51858 240 aaKnown RBP12.01□□□□□ -0.49
LETMD1-225ENST00000550715 DIXDC1Q155Q3 683 aa12.01□□□□□ -0.49
LETMD1-225ENST00000550715 SAMD7Q7Z3H4 446 aa12.01□□□□□ -0.49
LETMD1-225ENST00000550715 ORAI2Q96SN7 254 aa12.01□□□□□ -0.49
LETMD1-225ENST00000550715 NBPF3Q9H094 633 aa12.01□□□□□ -0.49
LETMD1-225ENST00000550715 DCCP43146 1447 aa12.01□□□□□ -0.49
LETMD1-225ENST00000550715 RIMS2Q9UQ26 1411 aa12.01□□□□□ -0.49
LETMD1-225ENST00000550715 SLC10A3P09131 477 aa12□□□□□ -0.49
LETMD1-225ENST00000550715 LSM11P83369 360 aaKnown RBP eCLIP12□□□□□ -0.49
LETMD1-225ENST00000550715 KRT27Q7Z3Y8 459 aa12□□□□□ -0.49
LETMD1-225ENST00000550715 RIC3Q7Z5B4 369 aa12□□□□□ -0.49
LETMD1-225ENST00000550715 UNC5CLQ8IV45 518 aa12□□□□□ -0.49
LETMD1-225ENST00000550715 SLC52A1Q9NWF4 448 aa12□□□□□ -0.49
LETMD1-225ENST00000550715 GLI3P10071 1580 aa12□□□□□ -0.49
LETMD1-225ENST00000550715 MOXD2PA6NHM9 499 aa11.99□□□□□ -0.49
LETMD1-225ENST00000550715 NDUFV2P19404 249 aa11.99□□□□□ -0.49
LETMD1-225ENST00000550715 CSPP1Q1MSJ5 1256 aa11.99□□□□□ -0.49
LETMD1-225ENST00000550715 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.99□□□□□ -0.49
LETMD1-225ENST00000550715 UNC13BO14795 1591 aa11.99□□□□□ -0.49
LETMD1-225ENST00000550715 EIF2AK4Q9P2K8 1649 aaKnown RBP11.99□□□□□ -0.49
LETMD1-225ENST00000550715 ADGRB3O60242 1522 aa11.98□□□□□ -0.49
LETMD1-225ENST00000550715 PIK3R4Q99570 1358 aa11.98□□□□□ -0.49
LETMD1-225ENST00000550715 ADGRD1Q6QNK2 874 aa11.98□□□□□ -0.49
LETMD1-225ENST00000550715 NOS1P29475 1434 aa11.97□□□□□ -0.49
LETMD1-225ENST00000550715 BHMG1C9JSJ3 638 aaPredicted RBP11.97□□□□□ -0.49
LETMD1-225ENST00000550715 TK2O00142 265 aa11.97□□□□□ -0.49
LETMD1-225ENST00000550715 KDM4AO75164 1064 aa11.97□□□□□ -0.49
LETMD1-225ENST00000550715 EZH2Q15910 746 aaKnown RBP11.97□□□□□ -0.49
LETMD1-225ENST00000550715 RSBN1LQ6PCB5 846 aaPredicted RBP11.97□□□□□ -0.49
LETMD1-225ENST00000550715 ARHGEF5Q12774 1597 aa11.96□□□□□ -0.49
LETMD1-225ENST00000550715 UTRNP46939 3433 aa11.96□□□□□ -0.49
LETMD1-225ENST00000550715 GCGRP47871 477 aa11.96□□□□□ -0.49
LETMD1-225ENST00000550715 LAPTM4BQ86VI4 370 aa11.96□□□□□ -0.49
LETMD1-225ENST00000550715 MRPL50Q8N5N7 158 aaKnown RBP11.96□□□□□ -0.49
LETMD1-225ENST00000550715 ZFRQ96KR1 1074 aaKnown RBP11.96□□□□□ -0.49
LETMD1-225ENST00000550715 CEP162Q5TB80 1403 aa11.95□□□□□ -0.5
LETMD1-225ENST00000550715 SPTLC1O15269 473 aa11.95□□□□□ -0.5
LETMD1-225ENST00000550715 FAM182BQ5T319 152 aa11.95□□□□□ -0.5
LETMD1-225ENST00000550715 SLF2Q8IX21 1173 aa11.95□□□□□ -0.5
LETMD1-225ENST00000550715 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.95□□□□□ -0.5
LETMD1-225ENST00000550715 RRP7BPQ9NSQ0 103 aa11.95□□□□□ -0.5
LETMD1-225ENST00000550715 PPP1R1BQ9UD71 204 aaPredicted RBP11.95□□□□□ -0.5
LETMD1-225ENST00000550715 MYOM2P54296 1465 aa11.95□□□□□ -0.5
LETMD1-225ENST00000550715 SLC4A3P48751 1232 aa11.94□□□□□ -0.5
LETMD1-225ENST00000550715 FLIIQ13045 1269 aa11.94□□□□□ -0.5
LETMD1-225ENST00000550715 ANKRD13DQ6ZTN6 518 aa11.94□□□□□ -0.5
LETMD1-225ENST00000550715 HLA-CQ95604 372 aa11.94□□□□□ -0.5
LETMD1-225ENST00000550715 C1orf167Q5SNV9 1468 aa11.94□□□□□ -0.5
LETMD1-225ENST00000550715 MYO5BQ9ULV0 1848 aa11.93□□□□□ -0.5
LETMD1-225ENST00000550715 TRPM2O94759 1503 aa11.93□□□□□ -0.5
LETMD1-225ENST00000550715 HOXA2O43364 376 aa11.93□□□□□ -0.5
LETMD1-225ENST00000550715 CFHP08603 1231 aa11.93□□□□□ -0.5
LETMD1-225ENST00000550715 GUCA2AQ02747 115 aa11.93□□□□□ -0.5
LETMD1-225ENST00000550715 SPHKAPQ2M3C7 1700 aa11.92□□□□□ -0.5
LETMD1-225ENST00000550715 CAMTA1Q9Y6Y1 1673 aa11.92□□□□□ -0.5
LETMD1-225ENST00000550715 RFC5P40937 340 aa11.92□□□□□ -0.5
LETMD1-225ENST00000550715 CAMKK2Q96RR4 588 aa11.92□□□□□ -0.5
LETMD1-225ENST00000550715 PCDHB15Q9Y5E8 787 aa11.92□□□□□ -0.5
LETMD1-225ENST00000550715 ADGRL3Q9HAR2 1447 aa11.92□□□□□ -0.5
LETMD1-225ENST00000550715 KANK1Q14678 1352 aa11.92□□□□□ -0.5
LETMD1-225ENST00000550715 SLIT2O94813 1529 aa11.91□□□□□ -0.5
LETMD1-225ENST00000550715 DUOX2Q9NRD8 1548 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms