RNA–Protein interactions for RNA: ENST00000550419.5

CDK4-207, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 919 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-207ENST00000550419 DIAPH1O60610 1272 aaKnown RBP23.56■■□□□ 1.36
CDK4-207ENST00000550419 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.56■■□□□ 1.36
CDK4-207ENST00000550419 KDRP35968 1356 aa23.55■■□□□ 1.36
CDK4-207ENST00000550419 CFAP53Q96M91 514 aa23.55■■□□□ 1.36
CDK4-207ENST00000550419 SF3B2Q13435 895 aaKnown RBP23.52■■□□□ 1.36
CDK4-207ENST00000550419 PKD1L3Q7Z443 1732 aa23.52■■□□□ 1.36
CDK4-207ENST00000550419 SHANK3Q9BYB0 1731 aa23.51■■□□□ 1.35
CDK4-207ENST00000550419 PCDH11XQ9BZA7 1347 aa23.51■■□□□ 1.35
CDK4-207ENST00000550419 PCDH11YQ9BZA8 1340 aa23.51■■□□□ 1.35
CDK4-207ENST00000550419 DDX54Q8TDD1 881 aaKnown RBP23.5■■□□□ 1.35
CDK4-207ENST00000550419 SPG7Q9UQ90 795 aa23.5■■□□□ 1.35
CDK4-207ENST00000550419 TRIM37O94972 964 aa23.49■■□□□ 1.35
CDK4-207ENST00000550419 SULT6B1Q6IMI4 303 aa23.49■■□□□ 1.35
CDK4-207ENST00000550419 TNS1Q9HBL0 1735 aaKnown RBP23.48■■□□□ 1.35
CDK4-207ENST00000550419 SBF2Q86WG5 1849 aa23.48■■□□□ 1.35
CDK4-207ENST00000550419 BCL11BQ9C0K0 894 aaPredicted RBP23.48■■□□□ 1.35
CDK4-207ENST00000550419 AEBP1Q8IUX7 1158 aa23.47■■□□□ 1.35
CDK4-207ENST00000550419 BAG6P46379 1132 aa23.46■■□□□ 1.35
CDK4-207ENST00000550419 AMOTQ4VCS5 1084 aa23.46■■□□□ 1.35
CDK4-207ENST00000550419 MYBBP1AQ9BQG0 1328 aaKnown RBP23.46■■□□□ 1.35
CDK4-207ENST00000550419 PRKRIP1Q9H875 184 aaPredicted RBP23.46■■□□□ 1.35
CDK4-207ENST00000550419 NUDCQ9Y266 331 aa23.46■■□□□ 1.35
CDK4-207ENST00000550419 CYP27B1O15528 508 aa23.45■■□□□ 1.34
CDK4-207ENST00000550419 PLEKHO1Q53GL0 409 aaPredicted RBP23.44■■□□□ 1.34
CDK4-207ENST00000550419 NHSQ6T4R5 1651 aa23.44■■□□□ 1.34
CDK4-207ENST00000550419 NKX1-1Q15270 411 aaPredicted RBP23.43■■□□□ 1.34
CDK4-207ENST00000550419 U2SURPO15042 1029 aaKnown RBP23.42■■□□□ 1.34
CDK4-207ENST00000550419 APBA3O96018 575 aa23.41■■□□□ 1.34
CDK4-207ENST00000550419 HMOX1P09601 288 aa23.41■■□□□ 1.34
CDK4-207ENST00000550419 IFNL2Q8IZJ0 200 aa23.41■■□□□ 1.34
CDK4-207ENST00000550419 PHKG2P15735 406 aa23.4■■□□□ 1.34
CDK4-207ENST00000550419 DEFB132Q7Z7B7 95 aa23.4■■□□□ 1.34
CDK4-207ENST00000550419 PLSCR1O15162 318 aa23.39■■□□□ 1.33
CDK4-207ENST00000550419 KCNQ2O43526 872 aa23.39■■□□□ 1.33
CDK4-207ENST00000550419 RGPD3A6NKT7 1758 aaPredicted RBP23.38■■□□□ 1.33
CDK4-207ENST00000550419 RGPD4Q7Z3J3 1758 aa23.38■■□□□ 1.33
CDK4-207ENST00000550419 ACSBG1Q96GR2 724 aa23.38■■□□□ 1.33
CDK4-207ENST00000550419 CAMKK2Q96RR4 588 aa23.38■■□□□ 1.33
CDK4-207ENST00000550419 FCHSD2O94868 740 aa23.37■■□□□ 1.33
CDK4-207ENST00000550419 PTF1AQ7RTS3 328 aa23.37■■□□□ 1.33
CDK4-207ENST00000550419 DOT1LQ8TEK3 1739 aa23.36■■□□□ 1.33
CDK4-207ENST00000550419 HSP90AB1P08238 724 aaKnown RBP23.36■■□□□ 1.33
CDK4-207ENST00000550419 EN1Q05925 392 aaPredicted RBP23.36■■□□□ 1.33
CDK4-207ENST00000550419 U2AF1L5P0DN76 240 aaPredicted RBP23.35■■□□□ 1.33
CDK4-207ENST00000550419 PRIM1P49642 420 aaKnown RBP23.35■■□□□ 1.33
CDK4-207ENST00000550419 U2AF1Q01081 240 aaKnown RBP eCLIP23.35■■□□□ 1.33
CDK4-207ENST00000550419 ZNF530Q6P9A1 599 aaPredicted RBP23.35■■□□□ 1.33
CDK4-207ENST00000550419 RSPH6AQ9H0K4 717 aa23.35■■□□□ 1.33
CDK4-207ENST00000550419 DCAF5Q96JK2 942 aa23.34■■□□□ 1.33
CDK4-207ENST00000550419 C1orf141Q5JVX7 400 aa23.33■■□□□ 1.33
CDK4-207ENST00000550419 BTAF1O14981 1849 aa23.32■■□□□ 1.32
CDK4-207ENST00000550419 TOGARAM1Q9Y4F4 1720 aa23.31■■□□□ 1.32
CDK4-207ENST00000550419 PRKAR2BP31323 418 aa23.31■■□□□ 1.32
CDK4-207ENST00000550419 EZH2Q15910 746 aaKnown RBP23.31■■□□□ 1.32
CDK4-207ENST00000550419 AKAP4Q5JQC9 854 aa23.31■■□□□ 1.32
CDK4-207ENST00000550419 SYTL4Q96C24 671 aaPredicted RBP23.31■■□□□ 1.32
CDK4-207ENST00000550419 ERVV-2B6SEH9 535 aa23.3■■□□□ 1.32
CDK4-207ENST00000550419 MTHFSDQ2M296 383 aaKnown RBP23.3■■□□□ 1.32
CDK4-207ENST00000550419 RREB1Q92766 1687 aa23.29■■□□□ 1.32
CDK4-207ENST00000550419 ANP32CO43423 234 aa23.29■■□□□ 1.32
CDK4-207ENST00000550419 KDM6AO15550 1401 aaPredicted RBP23.28■■□□□ 1.32
CDK4-207ENST00000550419 GAS2L2Q8NHY3 880 aa23.28■■□□□ 1.32
CDK4-207ENST00000550419 PNNQ9H307 717 aaKnown RBP23.28■■□□□ 1.32
CDK4-207ENST00000550419 PHACTR3Q96KR7 559 aa23.27■■□□□ 1.32
CDK4-207ENST00000550419 KAT6BQ8WYB5 2073 aa23.26■■□□□ 1.31
CDK4-207ENST00000550419 PROM2Q8N271 834 aa23.26■■□□□ 1.31
CDK4-207ENST00000550419 ITGB4P16144 1822 aa23.26■■□□□ 1.31
CDK4-207ENST00000550419 MPRIPQ6WCQ1 1025 aa23.25■■□□□ 1.31
CDK4-207ENST00000550419 TMOD3Q9NYL9 352 aa23.25■■□□□ 1.31
CDK4-207ENST00000550419 ADAMTS7Q9UKP4 1686 aa23.25■■□□□ 1.31
CDK4-207ENST00000550419 TXNRD1Q16881 649 aa23.24■■□□□ 1.31
CDK4-207ENST00000550419 PIGBQ92521 554 aa23.24■■□□□ 1.31
CDK4-207ENST00000550419 PLEKHF1Q96S99 279 aa23.23■■□□□ 1.31
CDK4-207ENST00000550419 MAP3K5Q99683 1374 aa23.23■■□□□ 1.31
CDK4-207ENST00000550419 NUP188Q5SRE5 1749 aa23.22■■□□□ 1.31
CDK4-207ENST00000550419 GNAT3A8MTJ3 354 aa23.22■■□□□ 1.31
CDK4-207ENST00000550419 NEFMP07197 916 aa23.22■■□□□ 1.31
CDK4-207ENST00000550419 SLC27A3Q5K4L6 730 aa23.22■■□□□ 1.31
CDK4-207ENST00000550419 SMARCC1Q92922 1105 aaPredicted RBP23.22■■□□□ 1.31
CDK4-207ENST00000550419 SCN11AQ9UI33 1791 aa23.22■■□□□ 1.31
CDK4-207ENST00000550419 CABP4P57796 275 aa23.21■■□□□ 1.31
CDK4-207ENST00000550419 LY75O60449 1722 aa23.21■■□□□ 1.31
CDK4-207ENST00000550419 MRC1P22897 1456 aa23.2■■□□□ 1.3
CDK4-207ENST00000550419 RNMTO43148 476 aaKnown RBP23.2■■□□□ 1.3
CDK4-207ENST00000550419 WDR43Q15061 677 aaKnown RBP eCLIP23.2■■□□□ 1.3
CDK4-207ENST00000550419 HMGB2P26583 209 aaKnown RBP23.19■■□□□ 1.3
CDK4-207ENST00000550419 PALLDQ8WX93 1383 aa23.18■■□□□ 1.3
CDK4-207ENST00000550419 HTATSF1O43719 755 aaKnown RBP23.18■■□□□ 1.3
CDK4-207ENST00000550419 NBPF14Q5TI25 921 aa23.18■■□□□ 1.3
CDK4-207ENST00000550419 LGR6Q9HBX8 967 aa23.18■■□□□ 1.3
CDK4-207ENST00000550419 NFATC2IPQ8NCF5 419 aa23.17■■□□□ 1.3
CDK4-207ENST00000550419 SLC52A2Q9HAB3 445 aa23.17■■□□□ 1.3
CDK4-207ENST00000550419 CEMIPQ8WUJ3 1361 aa23.16■■□□□ 1.3
CDK4-207ENST00000550419 MAPK8IP3Q9UPT6 1336 aa23.16■■□□□ 1.3
CDK4-207ENST00000550419 LRRC4BQ9NT99 713 aa23.16■■□□□ 1.3
CDK4-207ENST00000550419 IL17REQ8NFR9 667 aa23.15■■□□□ 1.3
CDK4-207ENST00000550419 ATG3Q9NT62 314 aa23.15■■□□□ 1.3
CDK4-207ENST00000550419 ASAP1Q9ULH1 1129 aa23.15■■□□□ 1.3
CDK4-207ENST00000550419 ADAMTS8Q9UP79 889 aa23.15■■□□□ 1.3
CDK4-207ENST00000550419 PAPPAQ13219 1627 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms