RNA–Protein interactions for RNA: ENST00000550173.1

SLC38A1-208, Transcript of solute carrier family 38 member 1, humanhuman

TSL 5

Gene SLC38A1, Length 891 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-208ENST00000550173 INSRP06213 1382 aa27.6■■■□□ 2.01
SLC38A1-208ENST00000550173 PRIM1P49642 420 aaKnown RBP27.6■■■□□ 2.01
SLC38A1-208ENST00000550173 RAPGEF4Q8WZA2 1011 aa27.6■■■□□ 2.01
SLC38A1-208ENST00000550173 LRRC4BQ9NT99 713 aa27.6■■■□□ 2.01
SLC38A1-208ENST00000550173 FLT4P35916 1363 aa27.6■■■□□ 2.01
SLC38A1-208ENST00000550173 PAPPAQ13219 1627 aa27.59■■■□□ 2.01
SLC38A1-208ENST00000550173 SHANK3Q9BYB0 1731 aa27.58■■■□□ 2.01
SLC38A1-208ENST00000550173 PTGER2P43116 358 aa27.58■■■□□ 2.01
SLC38A1-208ENST00000550173 CGNL1Q0VF96 1302 aa27.58■■■□□ 2.01
SLC38A1-208ENST00000550173 KIF24Q5T7B8 1368 aa27.58■■■□□ 2.01
SLC38A1-208ENST00000550173 DOT1LQ8TEK3 1739 aa27.58■■■□□ 2.01
SLC38A1-208ENST00000550173 DCAF8L1A6NGE4 600 aa27.57■■■□□ 2
SLC38A1-208ENST00000550173 TATP17735 454 aaPredicted RBP27.57■■■□□ 2
SLC38A1-208ENST00000550173 POLR3GLQ9BT43 218 aa27.57■■■□□ 2
SLC38A1-208ENST00000550173 MTFR1LQ9H019 292 aa27.57■■■□□ 2
SLC38A1-208ENST00000550173 ZNF827Q17R98 1081 aa27.56■■■□□ 2
SLC38A1-208ENST00000550173 SLC27A3Q5K4L6 730 aa27.56■■■□□ 2
SLC38A1-208ENST00000550173 EMILIN1Q9Y6C2 1016 aa27.56■■■□□ 2
SLC38A1-208ENST00000550173 NSD2O96028 1365 aa27.52■■■□□ 2
SLC38A1-208ENST00000550173 PPM1GO15355 546 aaPredicted RBP27.52■■■□□ 2
SLC38A1-208ENST00000550173 KCNQ4P56696 695 aa27.51■■□□□ 1.99
SLC38A1-208ENST00000550173 AKT1S1Q96B36 256 aa27.51■■□□□ 1.99
SLC38A1-208ENST00000550173 CCER1Q8TC90 406 aaPredicted RBP27.5■■□□□ 1.99
SLC38A1-208ENST00000550173 EIF4G2P78344 907 aaKnown RBP eCLIP27.49■■□□□ 1.99
SLC38A1-208ENST00000550173 SGIP1Q9BQI5 828 aa27.49■■□□□ 1.99
SLC38A1-208ENST00000550173 PCDH11XQ9BZA7 1347 aa27.48■■□□□ 1.99
SLC38A1-208ENST00000550173 PCDH11YQ9BZA8 1340 aa27.48■■□□□ 1.99
SLC38A1-208ENST00000550173 YY1P25490 414 aa27.47■■□□□ 1.99
SLC38A1-208ENST00000550173 FHDC1Q9C0D6 1143 aaPredicted RBP27.47■■□□□ 1.99
SLC38A1-208ENST00000550173 LY75O60449 1722 aa27.47■■□□□ 1.99
SLC38A1-208ENST00000550173 MAP2P11137 1827 aaKnown RBP27.46■■□□□ 1.99
SLC38A1-208ENST00000550173 HSPA5P11021 654 aaKnown RBP27.46■■□□□ 1.99
SLC38A1-208ENST00000550173 TFCP2L1Q9NZI6 479 aa27.46■■□□□ 1.99
SLC38A1-208ENST00000550173 ARXQ96QS3 562 aa27.45■■□□□ 1.98
SLC38A1-208ENST00000550173 CCNL1Q9UK58 526 aaPredicted RBP27.45■■□□□ 1.98
SLC38A1-208ENST00000550173 WASHC2AQ641Q2 1341 aa27.44■■□□□ 1.98
SLC38A1-208ENST00000550173 SYT17Q9BSW7 474 aa27.44■■□□□ 1.98
SLC38A1-208ENST00000550173 SLC16A10Q8TF71 515 aa27.43■■□□□ 1.98
SLC38A1-208ENST00000550173 QSER1Q2KHR3 1735 aa27.43■■□□□ 1.98
SLC38A1-208ENST00000550173 ANKRD26Q9UPS8 1709 aa27.43■■□□□ 1.98
SLC38A1-208ENST00000550173 PNPLA7Q6ZV29 1317 aa27.42■■□□□ 1.98
SLC38A1-208ENST00000550173 CYP27B1O15528 508 aa27.42■■□□□ 1.98
SLC38A1-208ENST00000550173 POLKQ9UBT6 870 aa27.42■■□□□ 1.98
SLC38A1-208ENST00000550173 TNNT2P45379 298 aaPredicted RBP27.41■■□□□ 1.98
SLC38A1-208ENST00000550173 TUBGCP6Q96RT7 1819 aa27.4■■□□□ 1.98
SLC38A1-208ENST00000550173 MPRIPQ6WCQ1 1025 aa27.39■■□□□ 1.98
SLC38A1-208ENST00000550173 EYA1Q99502 592 aa27.39■■□□□ 1.98
SLC38A1-208ENST00000550173 NCAPD2Q15021 1401 aa27.39■■□□□ 1.97
SLC38A1-208ENST00000550173 PANK3Q9H999 370 aa27.38■■□□□ 1.97
SLC38A1-208ENST00000550173 SPG7Q9UQ90 795 aa27.38■■□□□ 1.97
SLC38A1-208ENST00000550173 PKD1L3Q7Z443 1732 aa27.38■■□□□ 1.97
SLC38A1-208ENST00000550173 POLD1P28340 1107 aa27.36■■□□□ 1.97
SLC38A1-208ENST00000550173 PALLDQ8WX93 1383 aa27.35■■□□□ 1.97
SLC38A1-208ENST00000550173 MSH5O43196 834 aa27.34■■□□□ 1.97
SLC38A1-208ENST00000550173 ITGB4P16144 1822 aa27.34■■□□□ 1.97
SLC38A1-208ENST00000550173 TOGARAM1Q9Y4F4 1720 aa27.33■■□□□ 1.97
SLC38A1-208ENST00000550173 MAP3K5Q99683 1374 aa27.33■■□□□ 1.97
SLC38A1-208ENST00000550173 EIF4A2Q14240 407 aaKnown RBP27.32■■□□□ 1.96
SLC38A1-208ENST00000550173 NKX1-1Q15270 411 aaPredicted RBP27.32■■□□□ 1.96
SLC38A1-208ENST00000550173 KLHL34Q8N239 644 aa27.32■■□□□ 1.96
SLC38A1-208ENST00000550173 SMARCC1Q92922 1105 aaPredicted RBP27.32■■□□□ 1.96
SLC38A1-208ENST00000550173 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.31■■□□□ 1.963e-10■□□□□ 9.2
SLC38A1-208ENST00000550173 C5P01031 1676 aa27.3■■□□□ 1.96
SLC38A1-208ENST00000550173 COL24A1Q17RW2 1714 aa27.3■■□□□ 1.96
SLC38A1-208ENST00000550173 HMGB2P26583 209 aaKnown RBP27.3■■□□□ 1.96
SLC38A1-208ENST00000550173 COL23A1Q86Y22 540 aaPredicted RBP27.3■■□□□ 1.96
SLC38A1-208ENST00000550173 PIGBQ92521 554 aa27.3■■□□□ 1.96
SLC38A1-208ENST00000550173 TAF1LQ8IZX4 1826 aa27.27■■□□□ 1.96
SLC38A1-208ENST00000550173 IFNL2Q8IZJ0 200 aa27.27■■□□□ 1.96
SLC38A1-208ENST00000550173 PHKG2P15735 406 aa27.26■■□□□ 1.95
SLC38A1-208ENST00000550173 MORC1Q86VD1 984 aa27.26■■□□□ 1.95
SLC38A1-208ENST00000550173 TMOD3Q9NYL9 352 aa27.25■■□□□ 1.95
SLC38A1-208ENST00000550173 FLAD1Q8NFF5 587 aa27.24■■□□□ 1.95
SLC38A1-208ENST00000550173 IGSF1Q8N6C5 1336 aa27.23■■□□□ 1.95
SLC38A1-208ENST00000550173 GPR162Q16538 588 aa27.23■■□□□ 1.95
SLC38A1-208ENST00000550173 MSL1Q68DK7 614 aa27.23■■□□□ 1.95
SLC38A1-208ENST00000550173 KNSTRNQ9Y448 316 aa27.23■■□□□ 1.95
SLC38A1-208ENST00000550173 AK7Q96M32 723 aa27.22■■□□□ 1.95
SLC38A1-208ENST00000550173 C4BP0C0L5 1744 aa27.21■■□□□ 1.95
SLC38A1-208ENST00000550173 LOC102724428A0A0B4J2F2 783 aa27.19■■□□□ 1.94
SLC38A1-208ENST00000550173 SIK1P57059 783 aa27.19■■□□□ 1.94
SLC38A1-208ENST00000550173 ASAP1Q9ULH1 1129 aa27.19■■□□□ 1.94
SLC38A1-208ENST00000550173 CHD4Q14839 1912 aa27.19■■□□□ 1.94
SLC38A1-208ENST00000550173 PLEKHG2Q9H7P9 1386 aa27.19■■□□□ 1.94
SLC38A1-208ENST00000550173 PELP1Q8IZL8 1130 aaKnown RBP27.18■■□□□ 1.94
SLC38A1-208ENST00000550173 NLGN2Q8NFZ4 835 aa27.18■■□□□ 1.94
SLC38A1-208ENST00000550173 PLEKHO1Q53GL0 409 aaPredicted RBP27.17■■□□□ 1.94
SLC38A1-208ENST00000550173 PHF14O94880 888 aa27.15■■□□□ 1.94
SLC38A1-208ENST00000550173 HSP90AB1P08238 724 aaKnown RBP27.14■■□□□ 1.94
SLC38A1-208ENST00000550173 AMIGO3Q86WK7 504 aa27.14■■□□□ 1.94
SLC38A1-208ENST00000550173 LINC00116Q8NCU8 138 aa27.14■■□□□ 1.94
SLC38A1-208ENST00000550173 ATG3Q9NT62 314 aa27.14■■□□□ 1.94
SLC38A1-208ENST00000550173 KIF7Q2M1P5 1343 aa27.14■■□□□ 1.93
SLC38A1-208ENST00000550173 UBR3Q6ZT12 1888 aa27.13■■□□□ 1.93
SLC38A1-208ENST00000550173 ATP6V1AP38606 617 aa27.13■■□□□ 1.93
SLC38A1-208ENST00000550173 ZNF530Q6P9A1 599 aaPredicted RBP27.13■■□□□ 1.93
SLC38A1-208ENST00000550173 SMIM5Q71RC9 77 aa27.13■■□□□ 1.93
SLC38A1-208ENST00000550173 ZNF784Q8NCA9 323 aaPredicted RBP27.13■■□□□ 1.93
SLC38A1-208ENST00000550173 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.12■■□□□ 1.93
SLC38A1-208ENST00000550173 ERVV-2B6SEH9 535 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms