RNA–Protein interactions for RNA: ENST00000549766.5

TGFBR1-207, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 5

Gene TGFBR1, Length 1,678 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-207ENST00000549766 ERBB3P21860 1342 aa31.7■■■□□ 2.67
TGFBR1-207ENST00000549766 ZNF428Q96B54 188 aa31.7■■■□□ 2.66
TGFBR1-207ENST00000549766 LMO7Q8WWI1 1683 aa31.69■■■□□ 2.66
TGFBR1-207ENST00000549766 CHL1O00533 1208 aa31.68■■■□□ 2.66
TGFBR1-207ENST00000549766 RGPD5Q99666 1765 aa31.67■■■□□ 2.66
TGFBR1-207ENST00000549766 LRRC37A3O60309 1634 aa31.66■■■□□ 2.66
TGFBR1-207ENST00000549766 ALDH1L2Q3SY69 923 aa31.66■■■□□ 2.66
TGFBR1-207ENST00000549766 RTF1Q92541 710 aaKnown RBP31.66■■■□□ 2.66
TGFBR1-207ENST00000549766 SSH1Q8WYL5 1049 aa31.65■■■□□ 2.66
TGFBR1-207ENST00000549766 BCL2L13Q9BXK5 485 aa31.65■■■□□ 2.66
TGFBR1-207ENST00000549766 GNAT3A8MTJ3 354 aa31.64■■■□□ 2.66
TGFBR1-207ENST00000549766 MAP3K5Q99683 1374 aa31.64■■■□□ 2.66
TGFBR1-207ENST00000549766 VAMP4O75379 141 aa31.64■■■□□ 2.65
TGFBR1-207ENST00000549766 KIAA0232Q92628 1395 aa31.63■■■□□ 2.65
TGFBR1-207ENST00000549766 BRPF1P55201 1214 aaPredicted RBP31.62■■■□□ 2.65
TGFBR1-207ENST00000549766 FRAT1Q92837 279 aaPredicted RBP31.62■■■□□ 2.65
TGFBR1-207ENST00000549766 CANXP27824 592 aaKnown RBP31.61■■■□□ 2.65
TGFBR1-207ENST00000549766 SMC4Q9NTJ3 1288 aa31.61■■■□□ 2.65
TGFBR1-207ENST00000549766 TSPYL6Q8N831 410 aa31.6■■■□□ 2.65
TGFBR1-207ENST00000549766 ABCA3Q99758 1704 aa31.59■■■□□ 2.65
TGFBR1-207ENST00000549766 C8orf58Q8NAV2 365 aa31.58■■■□□ 2.65
TGFBR1-207ENST00000549766 AMOTQ4VCS5 1084 aa31.57■■■□□ 2.65
TGFBR1-207ENST00000549766 FAM208AQ9UK61 1670 aaKnown RBP31.57■■■□□ 2.64
TGFBR1-207ENST00000549766 TWISTNBQ3B726 338 aaPredicted RBP31.57■■■□□ 2.64
TGFBR1-207ENST00000549766 ZKSCAN2Q63HK3 967 aa31.57■■■□□ 2.64
TGFBR1-207ENST00000549766 IL17REQ8NFR9 667 aa31.57■■■□□ 2.64
TGFBR1-207ENST00000549766 CHRNA2Q15822 529 aa31.56■■■□□ 2.64
TGFBR1-207ENST00000549766 PLEKHO1Q53GL0 409 aaPredicted RBP31.56■■■□□ 2.64
TGFBR1-207ENST00000549766 PANK1Q8TE04 598 aa31.56■■■□□ 2.64
TGFBR1-207ENST00000549766 CEMIPQ8WUJ3 1361 aa31.55■■■□□ 2.64
TGFBR1-207ENST00000549766 ROBO1Q9Y6N7 1651 aa31.55■■■□□ 2.64
TGFBR1-207ENST00000549766 AHDC1Q5TGY3 1603 aaPredicted RBP31.55■■■□□ 2.64
TGFBR1-207ENST00000549766 KIF16BQ96L93 1317 aa31.54■■■□□ 2.64
TGFBR1-207ENST00000549766 PLEKHG2Q9H7P9 1386 aa31.54■■■□□ 2.64
TGFBR1-207ENST00000549766 RLBP1P12271 317 aa31.53■■■□□ 2.64
TGFBR1-207ENST00000549766 BABAM1Q9NWV8 329 aa31.53■■■□□ 2.64
TGFBR1-207ENST00000549766 TNNQ9UQP3 1299 aa31.53■■■□□ 2.64
TGFBR1-207ENST00000549766 MS4A1P11836 297 aa31.51■■■□□ 2.64
TGFBR1-207ENST00000549766 AKAP4Q5JQC9 854 aa31.51■■■□□ 2.64
TGFBR1-207ENST00000549766 NOB1Q9ULX3 412 aaKnown RBP31.51■■■□□ 2.63
TGFBR1-207ENST00000549766 COG6Q9Y2V7 657 aa31.51■■■□□ 2.63
TGFBR1-207ENST00000549766 TRIM27P14373 513 aa31.5■■■□□ 2.63
TGFBR1-207ENST00000549766 ATF7IPQ6VMQ6 1270 aa31.5■■■□□ 2.63
TGFBR1-207ENST00000549766 MRPL50Q8N5N7 158 aaKnown RBP31.5■■■□□ 2.63
TGFBR1-207ENST00000549766 ELL2O00472 640 aaPredicted RBP31.49■■■□□ 2.63
TGFBR1-207ENST00000549766 NLRP2Q9NX02 1062 aa31.49■■■□□ 2.63
TGFBR1-207ENST00000549766 TSPYL4Q9UJ04 414 aa31.49■■■□□ 2.63
TGFBR1-207ENST00000549766 HAP1P54257 671 aaPredicted RBP31.48■■■□□ 2.63
TGFBR1-207ENST00000549766 ZNF530Q6P9A1 599 aaPredicted RBP31.48■■■□□ 2.63
TGFBR1-207ENST00000549766 DZIP1LQ8IYY4 767 aaKnown RBP31.48■■■□□ 2.63
TGFBR1-207ENST00000549766 PRDM11Q9NQV5 511 aa31.48■■■□□ 2.63
TGFBR1-207ENST00000549766 IPO8O15397 1037 aaKnown RBP31.48■■■□□ 2.63
TGFBR1-207ENST00000549766 AAMPQ13685 434 aa31.48■■■□□ 2.63
TGFBR1-207ENST00000549766 MIS18AQ9NYP9 233 aa31.47■■■□□ 2.63
TGFBR1-207ENST00000549766 TAF7Q15545 349 aaPredicted RBP31.46■■■□□ 2.63
TGFBR1-207ENST00000549766 OVOS2A0A0G2JMS6 1433 aa31.46■■■□□ 2.63
TGFBR1-207ENST00000549766 KRT24Q2M2I5 525 aa31.45■■■□□ 2.63
TGFBR1-207ENST00000549766 ARHGAP45Q92619 1136 aa31.45■■■□□ 2.63
TGFBR1-207ENST00000549766 CSB-PGBD3P0DP91 1061 aa31.44■■■□□ 2.62
TGFBR1-207ENST00000549766 CLUAP1Q96AJ1 413 aa31.44■■■□□ 2.62
TGFBR1-207ENST00000549766 RAPGEF4Q8WZA2 1011 aa31.44■■■□□ 2.62
TGFBR1-207ENST00000549766 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.44■■■□□ 2.62
TGFBR1-207ENST00000549766 COL5A2P05997 1499 aaPredicted RBP31.43■■■□□ 2.62
TGFBR1-207ENST00000549766 MVPQ14764 893 aaKnown RBP31.43■■■□□ 2.62
TGFBR1-207ENST00000549766 MEGF6O75095 1541 aa31.43■■■□□ 2.62
TGFBR1-207ENST00000549766 WDR17Q8IZU2 1322 aa31.42■■■□□ 2.62
TGFBR1-207ENST00000549766 KDM2BQ8NHM5 1336 aa31.42■■■□□ 2.62
TGFBR1-207ENST00000549766 FTSJ3Q8IY81 847 aaKnown RBP31.42■■■□□ 2.62
TGFBR1-207ENST00000549766 LGR6Q9HBX8 967 aa31.42■■■□□ 2.62
TGFBR1-207ENST00000549766 ADAMTS7Q9UKP4 1686 aa31.42■■■□□ 2.62
TGFBR1-207ENST00000549766 COL22A1Q8NFW1 1626 aaPredicted RBP31.42■■■□□ 2.62
TGFBR1-207ENST00000549766 C1orf141Q5JVX7 400 aa31.41■■■□□ 2.62
TGFBR1-207ENST00000549766 TATP17735 454 aaPredicted RBP31.4■■■□□ 2.62
TGFBR1-207ENST00000549766 RNMTO43148 476 aaKnown RBP31.38■■■□□ 2.61
TGFBR1-207ENST00000549766 SOS1Q07889 1333 aaPredicted RBP31.38■■■□□ 2.61
TGFBR1-207ENST00000549766 MPRIPQ6WCQ1 1025 aa31.36■■■□□ 2.61
TGFBR1-207ENST00000549766 PKD1L3Q7Z443 1732 aa31.35■■■□□ 2.61
TGFBR1-207ENST00000549766 SPG7Q9UQ90 795 aa31.35■■■□□ 2.61
TGFBR1-207ENST00000549766 CENPQQ7L2Z9 268 aaPredicted RBP31.35■■■□□ 2.61
TGFBR1-207ENST00000549766 KDM3BQ7LBC6 1761 aa31.34■■■□□ 2.61
TGFBR1-207ENST00000549766 TCERG1O14776 1098 aaKnown RBP31.34■■■□□ 2.61
TGFBR1-207ENST00000549766 TMEM57Q8N5G2 664 aa31.33■■■□□ 2.61
TGFBR1-207ENST00000549766 DDX19BQ9UMR2 479 aa31.33■■■□□ 2.61
TGFBR1-207ENST00000549766 TSHZ2Q9NRE2 1034 aa31.32■■■□□ 2.6
TGFBR1-207ENST00000549766 VIRMAQ69YN4 1812 aaKnown RBP31.32■■■□□ 2.6
TGFBR1-207ENST00000549766 COL16A1Q07092 1604 aaPredicted RBP31.32■■■□□ 2.6
TGFBR1-207ENST00000549766 ABCC4O15439 1325 aa31.31■■■□□ 2.6
TGFBR1-207ENST00000549766 PHKG2P15735 406 aa31.31■■■□□ 2.6
TGFBR1-207ENST00000549766 TEFQ10587 303 aa31.31■■■□□ 2.6
TGFBR1-207ENST00000549766 TOM1O60784 492 aa31.3■■■□□ 2.6
TGFBR1-207ENST00000549766 TOM1L2Q6ZVM7 507 aa31.3■■■□□ 2.6
TGFBR1-207ENST00000549766 CARD10Q9BWT7 1032 aa31.3■■■□□ 2.6
TGFBR1-207ENST00000549766 API5Q9BZZ5 524 aaKnown RBP31.29■■■□□ 2.6
TGFBR1-207ENST00000549766 SIPA1L3O60292 1781 aaPredicted RBP31.29■■■□□ 2.6
TGFBR1-207ENST00000549766 ITPRIPQ8IWB1 547 aa31.29■■■□□ 2.6
TGFBR1-207ENST00000549766 PHLPP1O60346 1717 aa31.28■■■□□ 2.6
TGFBR1-207ENST00000549766 KDM6AO15550 1401 aaPredicted RBP31.28■■■□□ 2.6
TGFBR1-207ENST00000549766 IFNL2Q8IZJ0 200 aa31.28■■■□□ 2.6
TGFBR1-207ENST00000549766 PARP4Q9UKK3 1724 aaKnown RBP31.28■■■□□ 2.6
TGFBR1-207ENST00000549766 COL14A1Q05707 1796 aaKnown RBP31.27■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms