RNA–Protein interactions for RNA: ENST00000549750.5

CNOT2-220, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-220ENST00000549750 RTL1A6NKG5 1358 aa19.14■□□□□ 0.65
CNOT2-220ENST00000549750 GRIN3BO60391 1043 aa19.13■□□□□ 0.65
CNOT2-220ENST00000549750 KIF20BQ96Q89 1820 aa19.12■□□□□ 0.65
CNOT2-220ENST00000549750 FYB1O15117 783 aa19.11■□□□□ 0.65
CNOT2-220ENST00000549750 HOXC9P31274 260 aa19.11■□□□□ 0.65
CNOT2-220ENST00000549750 LRRC4BQ9NT99 713 aa19.11■□□□□ 0.65
CNOT2-220ENST00000549750 SHANK3Q9BYB0 1731 aa19.11■□□□□ 0.65
CNOT2-220ENST00000549750 NLGN2Q8NFZ4 835 aa19.1■□□□□ 0.65
CNOT2-220ENST00000549750 AKT1S1Q96B36 256 aa19.1■□□□□ 0.65
CNOT2-220ENST00000549750 PAPPAQ13219 1627 aa19.1■□□□□ 0.65
CNOT2-220ENST00000549750 KIF24Q5T7B8 1368 aa19.08■□□□□ 0.65
CNOT2-220ENST00000549750 BTAF1O14981 1849 aa19.08■□□□□ 0.64
CNOT2-220ENST00000549750 KAT6BQ8WYB5 2073 aa19.08■□□□□ 0.64
CNOT2-220ENST00000549750 RGPD2P0DJD1 1756 aa19.07■□□□□ 0.64
CNOT2-220ENST00000549750 YBX3P16989 372 aaKnown RBP eCLIP19.07■□□□□ 0.64
CNOT2-220ENST00000549750 AMPHP49418 695 aa19.07■□□□□ 0.64
CNOT2-220ENST00000549750 SLC27A3Q5K4L6 730 aa19.07■□□□□ 0.64
CNOT2-220ENST00000549750 PNPLA7Q6ZV29 1317 aa19.06■□□□□ 0.64
CNOT2-220ENST00000549750 HSPA6P17066 643 aa19.06■□□□□ 0.64
CNOT2-220ENST00000549750 GGNBP2Q9H3C7 697 aa19.06■□□□□ 0.64
CNOT2-220ENST00000549750 TFCP2L1Q9NZI6 479 aa19.06■□□□□ 0.64
CNOT2-220ENST00000549750 FBLN1P23142 703 aa19.05■□□□□ 0.64
CNOT2-220ENST00000549750 GPBP1L1Q9HC44 474 aaPredicted RBP19.05■□□□□ 0.64
CNOT2-220ENST00000549750 LTV1Q96GA3 475 aaPredicted RBP19.04■□□□□ 0.64
CNOT2-220ENST00000549750 ATP10DQ9P241 1426 aa19.04■□□□□ 0.64
CNOT2-220ENST00000549750 RRS1Q15050 365 aaKnown RBP19.03■□□□□ 0.64
CNOT2-220ENST00000549750 CARD14Q9BXL6 1004 aa19.03■□□□□ 0.64
CNOT2-220ENST00000549750 PCGF6Q9BYE7 350 aa19.03■□□□□ 0.64
CNOT2-220ENST00000549750 MEGF6O75095 1541 aa19.03■□□□□ 0.64
CNOT2-220ENST00000549750 INSRP06213 1382 aa19.03■□□□□ 0.64
CNOT2-220ENST00000549750 ANKRD26Q9UPS8 1709 aa19.03■□□□□ 0.64
CNOT2-220ENST00000549750 CGNL1Q0VF96 1302 aa19.02■□□□□ 0.64
CNOT2-220ENST00000549750 SMG6Q86US8 1419 aaKnown RBP19.02■□□□□ 0.64
CNOT2-220ENST00000549750 FLT4P35916 1363 aa19.02■□□□□ 0.64
CNOT2-220ENST00000549750 NSD3Q9BZ95 1437 aa19.01■□□□□ 0.63
CNOT2-220ENST00000549750 COL24A1Q17RW2 1714 aa19■□□□□ 0.63
CNOT2-220ENST00000549750 DOT1LQ8TEK3 1739 aa19■□□□□ 0.63
CNOT2-220ENST00000549750 NBPF6Q5VWK0 638 aa18.99■□□□□ 0.63
CNOT2-220ENST00000549750 NBPF4Q96M43 638 aa18.99■□□□□ 0.63
CNOT2-220ENST00000549750 QSER1Q2KHR3 1735 aa18.98■□□□□ 0.63
CNOT2-220ENST00000549750 ZCRB1Q8TBF4 217 aaKnown RBP18.98■□□□□ 0.63
CNOT2-220ENST00000549750 DDX54Q8TDD1 881 aaKnown RBP18.98■□□□□ 0.63
CNOT2-220ENST00000549750 LY75O60449 1722 aa18.97■□□□□ 0.63
CNOT2-220ENST00000549750 KCNQ4P56696 695 aa18.97■□□□□ 0.63
CNOT2-220ENST00000549750 HSP90AB2PQ58FF8 381 aa18.97■□□□□ 0.63
CNOT2-220ENST00000549750 NCAPD2Q15021 1401 aa18.97■□□□□ 0.63
CNOT2-220ENST00000549750 NSD2O96028 1365 aa18.96■□□□□ 0.63
CNOT2-220ENST00000549750 MSH5O43196 834 aa18.96■□□□□ 0.63
CNOT2-220ENST00000549750 ZNF526Q8TF50 670 aaPredicted RBP18.96■□□□□ 0.63
CNOT2-220ENST00000549750 RAPGEF4Q8WZA2 1011 aa18.94■□□□□ 0.62
CNOT2-220ENST00000549750 PKD1L3Q7Z443 1732 aa18.94■□□□□ 0.62
CNOT2-220ENST00000549750 MAP2P11137 1827 aaKnown RBP18.93■□□□□ 0.62
CNOT2-220ENST00000549750 EIF4G2P78344 907 aaKnown RBP eCLIP18.93■□□□□ 0.62
CNOT2-220ENST00000549750 SYTL4Q96C24 671 aaPredicted RBP18.93■□□□□ 0.62
CNOT2-220ENST00000549750 CD2APQ9Y5K6 639 aa18.93■□□□□ 0.62
CNOT2-220ENST00000549750 PRIM1P49642 420 aaKnown RBP18.92■□□□□ 0.62
CNOT2-220ENST00000549750 COL23A1Q86Y22 540 aaPredicted RBP18.92■□□□□ 0.62
CNOT2-220ENST00000549750 EMILIN1Q9Y6C2 1016 aa18.92■□□□□ 0.62
CNOT2-220ENST00000549750 WASHC2AQ641Q2 1341 aa18.92■□□□□ 0.62
CNOT2-220ENST00000549750 ADCY9O60503 1353 aa18.92■□□□□ 0.62
CNOT2-220ENST00000549750 TATP17735 454 aaPredicted RBP18.91■□□□□ 0.62
CNOT2-220ENST00000549750 USHBP1Q8N6Y0 703 aa18.91■□□□□ 0.62
CNOT2-220ENST00000549750 PCDH11XQ9BZA7 1347 aa18.91■□□□□ 0.62
CNOT2-220ENST00000549750 PCDH11YQ9BZA8 1340 aa18.91■□□□□ 0.62
CNOT2-220ENST00000549750 MSL1Q68DK7 614 aa18.9■□□□□ 0.62
CNOT2-220ENST00000549750 CCNL1Q9UK58 526 aaPredicted RBP18.9■□□□□ 0.62
CNOT2-220ENST00000549750 TUBGCP6Q96RT7 1819 aa18.89■□□□□ 0.61
CNOT2-220ENST00000549750 HSPA5P11021 654 aaKnown RBP18.89■□□□□ 0.61
CNOT2-220ENST00000549750 CCER1Q8TC90 406 aaPredicted RBP18.89■□□□□ 0.61
CNOT2-220ENST00000549750 PLEKHG2Q9H7P9 1386 aa18.89■□□□□ 0.61
CNOT2-220ENST00000549750 APLP1P51693 650 aa18.88■□□□□ 0.61
CNOT2-220ENST00000549750 POLKQ9UBT6 870 aa18.87■□□□□ 0.61
CNOT2-220ENST00000549750 TOGARAM1Q9Y4F4 1720 aa18.86■□□□□ 0.61
CNOT2-220ENST00000549750 KIF3CO14782 793 aa18.86■□□□□ 0.61
CNOT2-220ENST00000549750 CYP27B1O15528 508 aa18.85■□□□□ 0.61
CNOT2-220ENST00000549750 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.85■□□□□ 0.612e-6■□□□□ 9.8
CNOT2-220ENST00000549750 ITGB4P16144 1822 aa18.84■□□□□ 0.61
CNOT2-220ENST00000549750 HMGB2P26583 209 aaKnown RBP18.84■□□□□ 0.61
CNOT2-220ENST00000549750 NKX1-1Q15270 411 aaPredicted RBP18.84■□□□□ 0.61
CNOT2-220ENST00000549750 FLAD1Q8NFF5 587 aa18.84■□□□□ 0.61
CNOT2-220ENST00000549750 DNAJC5GQ8N7S2 189 aa18.83■□□□□ 0.6
CNOT2-220ENST00000549750 EYA1Q99502 592 aa18.83■□□□□ 0.6
CNOT2-220ENST00000549750 C5P01031 1676 aa18.82■□□□□ 0.6
CNOT2-220ENST00000549750 PPM1GO15355 546 aaPredicted RBP18.82■□□□□ 0.6
CNOT2-220ENST00000549750 POLR3GLQ9BT43 218 aa18.82■□□□□ 0.6
CNOT2-220ENST00000549750 PANK3Q9H999 370 aa18.82■□□□□ 0.6
CNOT2-220ENST00000549750 TAF1LQ8IZX4 1826 aa18.81■□□□□ 0.6
CNOT2-220ENST00000549750 SPG7Q9UQ90 795 aa18.81■□□□□ 0.6
CNOT2-220ENST00000549750 IGSF1Q8N6C5 1336 aa18.79■□□□□ 0.6
CNOT2-220ENST00000549750 TOMM70O94826 608 aa18.79■□□□□ 0.6
CNOT2-220ENST00000549750 EIF4A2Q14240 407 aaKnown RBP18.79■□□□□ 0.6
CNOT2-220ENST00000549750 PALLDQ8WX93 1383 aa18.79■□□□□ 0.6
CNOT2-220ENST00000549750 WWC3Q9ULE0 1092 aa18.78■□□□□ 0.6
CNOT2-220ENST00000549750 MPRIPQ6WCQ1 1025 aa18.77■□□□□ 0.6
CNOT2-220ENST00000549750 SMARCC1Q92922 1105 aaPredicted RBP18.77■□□□□ 0.6
CNOT2-220ENST00000549750 IFNL2Q8IZJ0 200 aa18.75■□□□□ 0.59
CNOT2-220ENST00000549750 C4BP0C0L5 1744 aa18.74■□□□□ 0.59
CNOT2-220ENST00000549750 PHKG2P15735 406 aa18.74■□□□□ 0.59
CNOT2-220ENST00000549750 TNNT2P45379 298 aaPredicted RBP18.74■□□□□ 0.59
CNOT2-220ENST00000549750 PIGBQ92521 554 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms