RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 NSD2O96028 1365 aa23.14■■□□□ 1.3
RBFOX1-207ENST00000547338 APBA3O96018 575 aa23.13■■□□□ 1.29
RBFOX1-207ENST00000547338 USHBP1Q8N6Y0 703 aa23.13■■□□□ 1.29
RBFOX1-207ENST00000547338 NCAPD2Q15021 1401 aa23.13■■□□□ 1.29
RBFOX1-207ENST00000547338 PER1O15534 1290 aaPredicted RBP23.13■■□□□ 1.29
RBFOX1-207ENST00000547338 NEFLP07196 543 aa23.13■■□□□ 1.29
RBFOX1-207ENST00000547338 AMER1Q5JTC6 1135 aaPredicted RBP23.13■■□□□ 1.29
RBFOX1-207ENST00000547338 TNNT2P45379 298 aaPredicted RBP23.12■■□□□ 1.29
RBFOX1-207ENST00000547338 SMG6Q86US8 1419 aaKnown RBP23.12■■□□□ 1.29
RBFOX1-207ENST00000547338 NUP188Q5SRE5 1749 aa23.11■■□□□ 1.29
RBFOX1-207ENST00000547338 NHSQ6T4R5 1651 aa23.11■■□□□ 1.29
RBFOX1-207ENST00000547338 RGPD3A6NKT7 1758 aaPredicted RBP23.1■■□□□ 1.29
RBFOX1-207ENST00000547338 RGPD4Q7Z3J3 1758 aa23.1■■□□□ 1.29
RBFOX1-207ENST00000547338 BCL11BQ9C0K0 894 aaPredicted RBP23.09■■□□□ 1.29
RBFOX1-207ENST00000547338 ZBED9Q6R2W3 1325 aa23.09■■□□□ 1.29
RBFOX1-207ENST00000547338 PARD3Q8TEW0 1356 aa23.09■■□□□ 1.29
RBFOX1-207ENST00000547338 PPM1GO15355 546 aaPredicted RBP23.08■■□□□ 1.29
RBFOX1-207ENST00000547338 KCNQ2O43526 872 aa23.08■■□□□ 1.28
RBFOX1-207ENST00000547338 KNSTRNQ9Y448 316 aa23.08■■□□□ 1.28
RBFOX1-207ENST00000547338 ERICH6BQ5W0A0 696 aa23.05■■□□□ 1.28
RBFOX1-207ENST00000547338 CCDC184Q52MB2 194 aa23.04■■□□□ 1.28
RBFOX1-207ENST00000547338 MORC1Q86VD1 984 aa23.04■■□□□ 1.28
RBFOX1-207ENST00000547338 MYBBP1AQ9BQG0 1328 aaKnown RBP23.04■■□□□ 1.28
RBFOX1-207ENST00000547338 PLSCR1O15162 318 aa23.03■■□□□ 1.28
RBFOX1-207ENST00000547338 EIF4A2Q14240 407 aaKnown RBP23.03■■□□□ 1.28
RBFOX1-207ENST00000547338 ACSBG1Q96GR2 724 aa23.03■■□□□ 1.28
RBFOX1-207ENST00000547338 EYA1Q99502 592 aa23.03■■□□□ 1.28
RBFOX1-207ENST00000547338 PKD1L3Q7Z443 1732 aa23.03■■□□□ 1.28
RBFOX1-207ENST00000547338 PROM2Q8N271 834 aa23.03■■□□□ 1.28
RBFOX1-207ENST00000547338 ZCRB1Q8TBF4 217 aaKnown RBP23.03■■□□□ 1.28
RBFOX1-207ENST00000547338 DDX54Q8TDD1 881 aaKnown RBP23.03■■□□□ 1.28
RBFOX1-207ENST00000547338 BTAF1O14981 1849 aa23.02■■□□□ 1.28
RBFOX1-207ENST00000547338 PSDA5PKW4 1024 aaPredicted RBP23.02■■□□□ 1.28
RBFOX1-207ENST00000547338 FAM9BQ8IZU0 186 aa23.02■■□□□ 1.28
RBFOX1-207ENST00000547338 DOT1LQ8TEK3 1739 aa23.01■■□□□ 1.27
RBFOX1-207ENST00000547338 RAPGEF4Q8WZA2 1011 aa22.99■■□□□ 1.27
RBFOX1-207ENST00000547338 NPC1L1Q9UHC9 1359 aa22.98■■□□□ 1.27
RBFOX1-207ENST00000547338 TATP17735 454 aaPredicted RBP22.98■■□□□ 1.27
RBFOX1-207ENST00000547338 PNISRQ8TF01 805 aaKnown RBP22.98■■□□□ 1.27
RBFOX1-207ENST00000547338 IGSF1Q8N6C5 1336 aa22.97■■□□□ 1.27
RBFOX1-207ENST00000547338 R3HDM1Q15032 1099 aaKnown RBP22.97■■□□□ 1.27
RBFOX1-207ENST00000547338 CYP27B1O15528 508 aa22.96■■□□□ 1.27
RBFOX1-207ENST00000547338 FKBP8Q14318 412 aa22.96■■□□□ 1.27
RBFOX1-207ENST00000547338 CC2D1BQ5T0F9 858 aaKnown RBP22.96■■□□□ 1.27
RBFOX1-207ENST00000547338 KAT6BQ8WYB5 2073 aa22.95■■□□□ 1.26
RBFOX1-207ENST00000547338 TOGARAM1Q9Y4F4 1720 aa22.95■■□□□ 1.26
RBFOX1-207ENST00000547338 ANO8Q9HCE9 1232 aaPredicted RBP22.94■■□□□ 1.26
RBFOX1-207ENST00000547338 TXNRD1Q16881 649 aa22.92■■□□□ 1.26
RBFOX1-207ENST00000547338 PCDH11XQ9BZA7 1347 aa22.92■■□□□ 1.26
RBFOX1-207ENST00000547338 PCDH11YQ9BZA8 1340 aa22.92■■□□□ 1.26
RBFOX1-207ENST00000547338 PAPPAQ13219 1627 aa22.92■■□□□ 1.26
RBFOX1-207ENST00000547338 PRIM1P49642 420 aaKnown RBP22.92■■□□□ 1.26
RBFOX1-207ENST00000547338 LRP5O75197 1615 aa22.91■■□□□ 1.26
RBFOX1-207ENST00000547338 IL13P35225 146 aa22.9■■□□□ 1.26
RBFOX1-207ENST00000547338 MTHFSP49914 203 aa22.9■■□□□ 1.26
RBFOX1-207ENST00000547338 AEBP1Q8IUX7 1158 aa22.89■■□□□ 1.26
RBFOX1-207ENST00000547338 COL3A1P02461 1466 aaPredicted RBP22.88■■□□□ 1.25
RBFOX1-207ENST00000547338 LY75O60449 1722 aa22.88■■□□□ 1.25
RBFOX1-207ENST00000547338 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.87■■□□□ 1.25
RBFOX1-207ENST00000547338 PLEKHG2Q9H7P9 1386 aa22.87■■□□□ 1.25
RBFOX1-207ENST00000547338 NKX1-1Q15270 411 aaPredicted RBP22.87■■□□□ 1.25
RBFOX1-207ENST00000547338 LRRC4BQ9NT99 713 aa22.87■■□□□ 1.25
RBFOX1-207ENST00000547338 KDRP35968 1356 aa22.86■■□□□ 1.25
RBFOX1-207ENST00000547338 ITGB4P16144 1822 aa22.86■■□□□ 1.25
RBFOX1-207ENST00000547338 CNGB1Q14028 1251 aaPredicted RBP22.86■■□□□ 1.25
RBFOX1-207ENST00000547338 SYTL4Q96C24 671 aaPredicted RBP22.86■■□□□ 1.25
RBFOX1-207ENST00000547338 CASZ1Q86V15 1759 aa22.86■■□□□ 1.25
RBFOX1-207ENST00000547338 NBPF14Q5TI25 921 aa22.85■■□□□ 1.25
RBFOX1-207ENST00000547338 SPG7Q9UQ90 795 aa22.84■■□□□ 1.25
RBFOX1-207ENST00000547338 PHKG2P15735 406 aa22.82■■□□□ 1.24
RBFOX1-207ENST00000547338 PDGFDQ9GZP0 370 aaPredicted RBP22.82■■□□□ 1.24
RBFOX1-207ENST00000547338 KCNQ4P56696 695 aa22.81■■□□□ 1.24
RBFOX1-207ENST00000547338 SULT6B1Q6IMI4 303 aa22.81■■□□□ 1.24
RBFOX1-207ENST00000547338 ZNF827Q17R98 1081 aa22.79■■□□□ 1.24
RBFOX1-207ENST00000547338 SLC15A2Q16348 729 aa22.78■■□□□ 1.24
RBFOX1-207ENST00000547338 IFNL2Q8IZJ0 200 aa22.78■■□□□ 1.24
RBFOX1-207ENST00000547338 KDM6AO15550 1401 aaPredicted RBP22.78■■□□□ 1.24
RBFOX1-207ENST00000547338 NUDCQ9Y266 331 aa22.77■■□□□ 1.24
RBFOX1-207ENST00000547338 MPRIPQ6WCQ1 1025 aa22.77■■□□□ 1.24
RBFOX1-207ENST00000547338 PIGBQ92521 554 aa22.77■■□□□ 1.24
RBFOX1-207ENST00000547338 DIAPH1O60610 1272 aaKnown RBP22.76■■□□□ 1.23
RBFOX1-207ENST00000547338 SLC27A3Q5K4L6 730 aa22.76■■□□□ 1.23
RBFOX1-207ENST00000547338 STK32BQ9NY57 414 aa22.76■■□□□ 1.23
RBFOX1-207ENST00000547338 TUBGCP6Q96RT7 1819 aa22.76■■□□□ 1.23
RBFOX1-207ENST00000547338 PLEKHO1Q53GL0 409 aaPredicted RBP22.75■■□□□ 1.23
RBFOX1-207ENST00000547338 AKT1S1Q96B36 256 aa22.75■■□□□ 1.23
RBFOX1-207ENST00000547338 HMOX1P09601 288 aa22.74■■□□□ 1.23
RBFOX1-207ENST00000547338 PPP2R1AP30153 589 aa22.74■■□□□ 1.23
RBFOX1-207ENST00000547338 PALLDQ8WX93 1383 aa22.74■■□□□ 1.23
RBFOX1-207ENST00000547338 ZNF530Q6P9A1 599 aaPredicted RBP22.73■■□□□ 1.23
RBFOX1-207ENST00000547338 AMOTQ4VCS5 1084 aa22.72■■□□□ 1.23
RBFOX1-207ENST00000547338 QSER1Q2KHR3 1735 aa22.72■■□□□ 1.23
RBFOX1-207ENST00000547338 TAF1LQ8IZX4 1826 aa22.72■■□□□ 1.23
RBFOX1-207ENST00000547338 CCNL1Q9UK58 526 aaPredicted RBP22.72■■□□□ 1.23
RBFOX1-207ENST00000547338 C5P01031 1676 aa22.71■■□□□ 1.23
RBFOX1-207ENST00000547338 RNF123Q5XPI4 1314 aa22.7■■□□□ 1.22
RBFOX1-207ENST00000547338 DCAF5Q96JK2 942 aa22.69■■□□□ 1.22
RBFOX1-207ENST00000547338 PPP4R2Q9NY27 417 aa22.69■■□□□ 1.22
RBFOX1-207ENST00000547338 ASAP1Q9ULH1 1129 aa22.69■■□□□ 1.22
RBFOX1-207ENST00000547338 SCN11AQ9UI33 1791 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms