RNA–Protein interactions for RNA: ENST00000546992.5

LETMD1-205, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-205ENST00000546992 CCDC146Q8IYE0 955 aa21.74■■□□□ 1.07
LETMD1-205ENST00000546992 THRAP3Q9Y2W1 955 aaKnown RBP21.74■■□□□ 1.07
LETMD1-205ENST00000546992 FAM98CQ17RN3 349 aaKnown RBP21.73■■□□□ 1.07
LETMD1-205ENST00000546992 PHACTR3Q96KR7 559 aa21.73■■□□□ 1.07
LETMD1-205ENST00000546992 PHF23Q9BUL5 403 aaPredicted RBP21.73■■□□□ 1.07
LETMD1-205ENST00000546992 IL2RBP14784 551 aa21.72■■□□□ 1.07
LETMD1-205ENST00000546992 TNS2Q63HR2 1409 aa21.72■■□□□ 1.07
LETMD1-205ENST00000546992 RAPGEF4Q8WZA2 1011 aa21.71■■□□□ 1.07
LETMD1-205ENST00000546992 PLEKHG2Q9H7P9 1386 aa21.7■■□□□ 1.06
LETMD1-205ENST00000546992 TATP17735 454 aaPredicted RBP21.69■■□□□ 1.06
LETMD1-205ENST00000546992 ONECUT3O60422 494 aaPredicted RBP21.68■■□□□ 1.06
LETMD1-205ENST00000546992 RBM6P78332 1123 aaKnown RBP21.68■■□□□ 1.06
LETMD1-205ENST00000546992 RGS12O14924 1447 aa21.68■■□□□ 1.06
LETMD1-205ENST00000546992 ADAMTS7Q9UKP4 1686 aa21.68■■□□□ 1.06
LETMD1-205ENST00000546992 TOGARAM1Q9Y4F4 1720 aa21.68■■□□□ 1.06
LETMD1-205ENST00000546992 SENP3-EIF4A1A0A087X0R7 540 aa21.67■■□□□ 1.06
LETMD1-205ENST00000546992 MTHFSDQ2M296 383 aaKnown RBP21.67■■□□□ 1.06
LETMD1-205ENST00000546992 RUNDC1Q96C34 613 aa21.67■■□□□ 1.06
LETMD1-205ENST00000546992 SCN11AQ9UI33 1791 aa21.66■■□□□ 1.06
LETMD1-205ENST00000546992 CDCA7Q9BWT1 371 aaPredicted RBP21.64■■□□□ 1.05
LETMD1-205ENST00000546992 DOT1LQ8TEK3 1739 aa21.63■■□□□ 1.05
LETMD1-205ENST00000546992 APAF1O14727 1248 aa21.63■■□□□ 1.05
LETMD1-205ENST00000546992 CYP27B1O15528 508 aa21.63■■□□□ 1.05
LETMD1-205ENST00000546992 RXRBP28702 533 aa21.63■■□□□ 1.05
LETMD1-205ENST00000546992 ZCRB1Q8TBF4 217 aaKnown RBP21.63■■□□□ 1.05
LETMD1-205ENST00000546992 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.63■■□□□ 1.05
LETMD1-205ENST00000546992 MAPK8IP3Q9UPT6 1336 aa21.62■■□□□ 1.05
LETMD1-205ENST00000546992 PLEKHO1Q53GL0 409 aaPredicted RBP21.62■■□□□ 1.05
LETMD1-205ENST00000546992 SEPT12Q8IYM1 358 aa21.62■■□□□ 1.05
LETMD1-205ENST00000546992 RRP7AQ9Y3A4 280 aaKnown RBP21.62■■□□□ 1.05
LETMD1-205ENST00000546992 SBF2Q86WG5 1849 aa21.62■■□□□ 1.05
LETMD1-205ENST00000546992 AMOTQ4VCS5 1084 aa21.61■■□□□ 1.05
LETMD1-205ENST00000546992 ZNF530Q6P9A1 599 aaPredicted RBP21.61■■□□□ 1.05
LETMD1-205ENST00000546992 PNNQ9H307 717 aaKnown RBP21.61■■□□□ 1.05
LETMD1-205ENST00000546992 SIPA1L3O60292 1781 aaPredicted RBP21.61■■□□□ 1.05
LETMD1-205ENST00000546992 ITGB4P16144 1822 aa21.6■■□□□ 1.05
LETMD1-205ENST00000546992 TMPOP42166 694 aaKnown RBP21.6■■□□□ 1.05
LETMD1-205ENST00000546992 NFE2L2Q16236 605 aa21.6■■□□□ 1.05
LETMD1-205ENST00000546992 DDB1Q16531 1140 aa21.6■■□□□ 1.05
LETMD1-205ENST00000546992 SPG7Q9UQ90 795 aa21.6■■□□□ 1.05
LETMD1-205ENST00000546992 KDM6AO15550 1401 aaPredicted RBP21.6■■□□□ 1.05
LETMD1-205ENST00000546992 PCDH11XQ9BZA7 1347 aa21.59■■□□□ 1.05
LETMD1-205ENST00000546992 PCDH11YQ9BZA8 1340 aa21.59■■□□□ 1.05
LETMD1-205ENST00000546992 A0A0G2JS52 829 aa21.59■■□□□ 1.05
LETMD1-205ENST00000546992 PHKG2P15735 406 aa21.59■■□□□ 1.05
LETMD1-205ENST00000546992 MYT1Q01538 1121 aa21.59■■□□□ 1.05
LETMD1-205ENST00000546992 MAP3K5Q99683 1374 aa21.59■■□□□ 1.05
LETMD1-205ENST00000546992 EXOC5O00471 708 aa21.58■■□□□ 1.05
LETMD1-205ENST00000546992 MARCH10Q8NA82 808 aaPredicted RBP21.58■■□□□ 1.05
LETMD1-205ENST00000546992 GAS2L2Q8NHY3 880 aa21.58■■□□□ 1.05
LETMD1-205ENST00000546992 DDX54Q8TDD1 881 aaKnown RBP21.57■■□□□ 1.04
LETMD1-205ENST00000546992 NEFMP07197 916 aa21.55■■□□□ 1.04
LETMD1-205ENST00000546992 NEUROD2Q15784 382 aa21.55■■□□□ 1.04
LETMD1-205ENST00000546992 AKAP4Q5JQC9 854 aa21.55■■□□□ 1.04
LETMD1-205ENST00000546992 TRIM35Q9UPQ4 493 aa21.55■■□□□ 1.04
LETMD1-205ENST00000546992 MRC1P22897 1456 aa21.55■■□□□ 1.04
LETMD1-205ENST00000546992 RIPK4P57078 832 aa21.54■■□□□ 1.04
LETMD1-205ENST00000546992 FAM182BQ5T319 152 aa21.54■■□□□ 1.04
LETMD1-205ENST00000546992 IFNL2Q8IZJ0 200 aa21.54■■□□□ 1.04
LETMD1-205ENST00000546992 KAT6BQ8WYB5 2073 aa21.54■■□□□ 1.04
LETMD1-205ENST00000546992 EP400Q96L91 3159 aa21.54■■□□□ 1.04
LETMD1-205ENST00000546992 NHSQ6T4R5 1651 aa21.53■■□□□ 1.04
LETMD1-205ENST00000546992 DCTN1Q14203 1278 aa21.53■■□□□ 1.04
LETMD1-205ENST00000546992 NKX1-1Q15270 411 aaPredicted RBP21.53■■□□□ 1.04
LETMD1-205ENST00000546992 C1orf141Q5JVX7 400 aa21.53■■□□□ 1.04
LETMD1-205ENST00000546992 GNAT3A8MTJ3 354 aa21.52■■□□□ 1.04
LETMD1-205ENST00000546992 MPRIPQ6WCQ1 1025 aa21.52■■□□□ 1.04
LETMD1-205ENST00000546992 IL17REQ8NFR9 667 aa21.52■■□□□ 1.04
LETMD1-205ENST00000546992 THUMPD2Q9BTF0 503 aaKnown RBP21.52■■□□□ 1.04
LETMD1-205ENST00000546992 LGR6Q9HBX8 967 aa21.52■■□□□ 1.04
LETMD1-205ENST00000546992 SALL2Q9Y467 1007 aaPredicted RBP21.52■■□□□ 1.04
LETMD1-205ENST00000546992 CEMIPQ8WUJ3 1361 aa21.51■■□□□ 1.03
LETMD1-205ENST00000546992 MCM10Q7L590 875 aa21.51■■□□□ 1.03
LETMD1-205ENST00000546992 HNRNPUQ00839 825 aaKnown RBP eCLIP21.5■■□□□ 1.03
LETMD1-205ENST00000546992 PDE3BQ13370 1112 aa21.5■■□□□ 1.03
LETMD1-205ENST00000546992 KRT27Q7Z3Y8 459 aa21.5■■□□□ 1.03
LETMD1-205ENST00000546992 PAPPAQ13219 1627 aa21.5■■□□□ 1.03
LETMD1-205ENST00000546992 BCL9O00512 1426 aa21.49■■□□□ 1.03
LETMD1-205ENST00000546992 RNMTO43148 476 aaKnown RBP21.49■■□□□ 1.03
LETMD1-205ENST00000546992 ZNF521Q96K83 1311 aa21.49■■□□□ 1.03
LETMD1-205ENST00000546992 KDM3BQ7LBC6 1761 aa21.48■■□□□ 1.03
LETMD1-205ENST00000546992 BTAF1O14981 1849 aa21.48■■□□□ 1.03
LETMD1-205ENST00000546992 HTATSF1O43719 755 aaKnown RBP21.47■■□□□ 1.03
LETMD1-205ENST00000546992 CCDC27Q2M243 656 aa21.47■■□□□ 1.03
LETMD1-205ENST00000546992 NCBP3Q53F19 620 aaKnown RBP21.47■■□□□ 1.03
LETMD1-205ENST00000546992 WWC1Q8IX03 1113 aa21.47■■□□□ 1.03
LETMD1-205ENST00000546992 DCAF5Q96JK2 942 aa21.47■■□□□ 1.03
LETMD1-205ENST00000546992 TNS1Q9HBL0 1735 aaKnown RBP21.46■■□□□ 1.03
LETMD1-205ENST00000546992 HSP90AB1P08238 724 aaKnown RBP21.45■■□□□ 1.02
LETMD1-205ENST00000546992 UBR2Q8IWV8 1755 aa21.44■■□□□ 1.02
LETMD1-205ENST00000546992 LMOD3Q0VAK6 560 aa21.44■■□□□ 1.02
LETMD1-205ENST00000546992 RTF1Q92541 710 aaKnown RBP21.44■■□□□ 1.02
LETMD1-205ENST00000546992 YTHDC1Q96MU7 727 aaKnown RBP21.44■■□□□ 1.02
LETMD1-205ENST00000546992 PTF1AQ7RTS3 328 aa21.43■■□□□ 1.02
LETMD1-205ENST00000546992 ACSBG1Q96GR2 724 aa21.43■■□□□ 1.02
LETMD1-205ENST00000546992 NGEFQ8N5V2 710 aa21.42■■□□□ 1.02
LETMD1-205ENST00000546992 KCNQ2O43526 872 aa21.41■■□□□ 1.02
LETMD1-205ENST00000546992 SLC52A2Q9HAB3 445 aa21.41■■□□□ 1.02
LETMD1-205ENST00000546992 ZBED9Q6R2W3 1325 aa21.4■■□□□ 1.02
LETMD1-205ENST00000546992 ERVV-2B6SEH9 535 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms