RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 HMOX1P09601 288 aa29.15■■■□□ 2.26
FOXA1-202ENST00000545425 MBIPQ9NS73 344 aa29.15■■■□□ 2.26
FOXA1-202ENST00000545425 PLEKHG3A1L390 1219 aa29.14■■■□□ 2.26
FOXA1-202ENST00000545425 ORAI2Q96SN7 254 aa29.14■■■□□ 2.26
FOXA1-202ENST00000545425 RBM25P49756 843 aaKnown RBP29.13■■■□□ 2.25
FOXA1-202ENST00000545425 TWISTNBQ3B726 338 aaPredicted RBP29.13■■■□□ 2.25
FOXA1-202ENST00000545425 LRRC59Q96AG4 307 aaKnown RBP29.13■■■□□ 2.25
FOXA1-202ENST00000545425 OVOS2A0A0J9YW53 1432 aa29.12■■■□□ 2.25
FOXA1-202ENST00000545425 OVOS2Q6IE36 1432 aa29.12■■■□□ 2.25
FOXA1-202ENST00000545425 SPATA31A6Q5VVP1 1343 aa29.12■■■□□ 2.25
FOXA1-202ENST00000545425 ILDR2Q71H61 639 aa29.11■■■□□ 2.25
FOXA1-202ENST00000545425 ESCO1Q5FWF5 840 aa29.1■■■□□ 2.25
FOXA1-202ENST00000545425 KIAA0232Q92628 1395 aa29.1■■■□□ 2.25
FOXA1-202ENST00000545425 TTC21BQ7Z4L5 1316 aa29.1■■■□□ 2.25
FOXA1-202ENST00000545425 SNX21Q969T3 373 aa29.09■■■□□ 2.25
FOXA1-202ENST00000545425 USP31Q70CQ4 1352 aa29.09■■■□□ 2.25
FOXA1-202ENST00000545425 CHMP5Q9NZZ3 219 aa29.08■■■□□ 2.25
FOXA1-202ENST00000545425 MFAP1P55081 439 aaKnown RBP29.07■■■□□ 2.24
FOXA1-202ENST00000545425 DDX17Q92841 729 aaKnown RBP29.07■■■□□ 2.24
FOXA1-202ENST00000545425 NHSL1Q5SYE7 1610 aa29.06■■■□□ 2.24
FOXA1-202ENST00000545425 HSCBQ8IWL3 235 aa29.06■■■□□ 2.24
FOXA1-202ENST00000545425 PRR36Q9H6K5 1346 aa29.06■■■□□ 2.24
FOXA1-202ENST00000545425 RGPD1P0DJD0 1748 aa29.06■■■□□ 2.24
FOXA1-202ENST00000545425 USP6P35125 1406 aa29.05■■■□□ 2.24
FOXA1-202ENST00000545425 NUTM2FA1L443 756 aa29.05■■■□□ 2.24
FOXA1-202ENST00000545425 TTC21AQ8NDW8 1320 aa29.05■■■□□ 2.24
FOXA1-202ENST00000545425 SOS2Q07890 1332 aaPredicted RBP29.04■■■□□ 2.24
FOXA1-202ENST00000545425 TSPYL6Q8N831 410 aa29.04■■■□□ 2.24
FOXA1-202ENST00000545425 SLKQ9H2G2 1235 aaPredicted RBP29.04■■■□□ 2.24
FOXA1-202ENST00000545425 NPHP3Q7Z494 1330 aa29.03■■■□□ 2.24
FOXA1-202ENST00000545425 FBLN1P23142 703 aa29.03■■■□□ 2.24
FOXA1-202ENST00000545425 INTS3Q68E01 1043 aaKnown RBP29.03■■■□□ 2.24
FOXA1-202ENST00000545425 LNPKQ9C0E8 428 aa29.02■■■□□ 2.24
FOXA1-202ENST00000545425 ARHGEF10O15013 1369 aa29.02■■■□□ 2.24
FOXA1-202ENST00000545425 PTPRCP08575 1304 aa29.01■■■□□ 2.23
FOXA1-202ENST00000545425 THUMPD2Q9BTF0 503 aaKnown RBP29.01■■■□□ 2.23
FOXA1-202ENST00000545425 ZRANB1Q9UGI0 708 aa29.01■■■□□ 2.23
FOXA1-202ENST00000545425 SSH2Q76I76 1423 aa29■■■□□ 2.23
FOXA1-202ENST00000545425 EIF4A2Q14240 407 aaKnown RBP29■■■□□ 2.23
FOXA1-202ENST00000545425 RRS1Q15050 365 aaKnown RBP29■■■□□ 2.23
FOXA1-202ENST00000545425 CIZ1Q9ULV3 898 aaPredicted RBP29■■■□□ 2.23
FOXA1-202ENST00000545425 CHL1O00533 1208 aa28.99■■■□□ 2.23
FOXA1-202ENST00000545425 L1TD1Q5T7N2 865 aaKnown RBP28.99■■■□□ 2.23
FOXA1-202ENST00000545425 ANKRD45Q5TZF3 282 aa28.99■■■□□ 2.23
FOXA1-202ENST00000545425 C8orf58Q8NAV2 365 aa28.99■■■□□ 2.23
FOXA1-202ENST00000545425 FOXO3O43524 673 aa28.99■■■□□ 2.23
FOXA1-202ENST00000545425 ACEP12821 1306 aa28.97■■■□□ 2.23
FOXA1-202ENST00000545425 RGS17Q9UGC6 210 aaPredicted RBP28.97■■■□□ 2.23
FOXA1-202ENST00000545425 FMN2Q9NZ56 1722 aa28.97■■■□□ 2.23
FOXA1-202ENST00000545425 MEX3CQ5U5Q3 659 aaKnown RBP28.97■■■□□ 2.23
FOXA1-202ENST00000545425 RPAP2Q8IXW5 612 aaPredicted RBP28.97■■■□□ 2.23
FOXA1-202ENST00000545425 NUTM2BA6NNL0 878 aaPredicted RBP28.94■■■□□ 2.22
FOXA1-202ENST00000545425 NUTM2EB1AL46 878 aaPredicted RBP28.94■■■□□ 2.22
FOXA1-202ENST00000545425 PTMSP20962 102 aa28.94■■■□□ 2.22
FOXA1-202ENST00000545425 SULT6B1Q6IMI4 303 aa28.94■■■□□ 2.22
FOXA1-202ENST00000545425 NUTM2AQ8IVF1 878 aaPredicted RBP28.94■■■□□ 2.22
FOXA1-202ENST00000545425 DCTPP1Q9H773 170 aa28.94■■■□□ 2.22
FOXA1-202ENST00000545425 ANKARQ7Z5J8 1434 aa28.94■■■□□ 2.22
FOXA1-202ENST00000545425 PHF8Q9UPP1 1060 aa28.93■■■□□ 2.22
FOXA1-202ENST00000545425 MCM4P33991 863 aa28.92■■■□□ 2.22
FOXA1-202ENST00000545425 SIRT2Q8IXJ6 389 aa28.92■■■□□ 2.22
FOXA1-202ENST00000545425 LRP6O75581 1613 aa28.92■■■□□ 2.22
FOXA1-202ENST00000545425 PEAK1Q9H792 1746 aa28.92■■■□□ 2.22
FOXA1-202ENST00000545425 CDC45O75419 566 aa28.92■■■□□ 2.22
FOXA1-202ENST00000545425 SBNO1A3KN83 1393 aa28.91■■■□□ 2.22
FOXA1-202ENST00000545425 DDX11L8A8MPP1 907 aa28.91■■■□□ 2.22
FOXA1-202ENST00000545425 SOCS7O14512 581 aa28.9■■■□□ 2.22
FOXA1-202ENST00000545425 ANKRD44Q8N8A2 993 aa28.9■■■□□ 2.22
FOXA1-202ENST00000545425 SOS1Q07889 1333 aaPredicted RBP28.9■■■□□ 2.22
FOXA1-202ENST00000545425 FLT4P35916 1363 aa28.89■■■□□ 2.22
FOXA1-202ENST00000545425 PXDNQ92626 1479 aa28.89■■■□□ 2.22
FOXA1-202ENST00000545425 HTATSF1O43719 755 aaKnown RBP28.89■■■□□ 2.22
FOXA1-202ENST00000545425 KDRP35968 1356 aa28.89■■■□□ 2.21
FOXA1-202ENST00000545425 CRB1P82279 1406 aa28.89■■■□□ 2.21
FOXA1-202ENST00000545425 DDIT3P35638 169 aa28.88■■■□□ 2.21
FOXA1-202ENST00000545425 RGS12O14924 1447 aa28.88■■■□□ 2.21
FOXA1-202ENST00000545425 KIF1AQ12756 1690 aa28.88■■■□□ 2.21
FOXA1-202ENST00000545425 ELL2O00472 640 aaPredicted RBP28.87■■■□□ 2.21
FOXA1-202ENST00000545425 XPCQ01831 940 aaPredicted RBP28.87■■■□□ 2.21
FOXA1-202ENST00000545425 USP54Q70EL1 1684 aa28.87■■■□□ 2.21
FOXA1-202ENST00000545425 FAM83GA6ND36 823 aa28.87■■■□□ 2.21
FOXA1-202ENST00000545425 ISY1Q9ULR0 285 aaKnown RBP28.87■■■□□ 2.21
FOXA1-202ENST00000545425 PSME1Q06323 249 aa28.86■■■□□ 2.21
FOXA1-202ENST00000545425 KRT28Q7Z3Y7 464 aa28.86■■■□□ 2.21
FOXA1-202ENST00000545425 ATP10DQ9P241 1426 aa28.85■■■□□ 2.21
FOXA1-202ENST00000545425 ZNF772Q68DY9 489 aaPredicted RBP28.85■■■□□ 2.21
FOXA1-202ENST00000545425 TBC1D9Q6ZT07 1266 aa28.85■■■□□ 2.21
FOXA1-202ENST00000545425 IL27Q8NEV9 243 aa28.85■■■□□ 2.21
FOXA1-202ENST00000545425 RTL1A6NKG5 1358 aa28.84■■■□□ 2.21
FOXA1-202ENST00000545425 GAS2L2Q8NHY3 880 aa28.84■■■□□ 2.21
FOXA1-202ENST00000545425 C1orf115Q9H7X2 142 aa28.84■■■□□ 2.21
FOXA1-202ENST00000545425 AEBP1Q8IUX7 1158 aa28.83■■■□□ 2.21
FOXA1-202ENST00000545425 POTEAQ6S8J7 498 aa28.83■■■□□ 2.21
FOXA1-202ENST00000545425 HMMRO75330 724 aa28.82■■■□□ 2.2
FOXA1-202ENST00000545425 SPATA31A3Q5VYP0 1347 aa28.81■■■□□ 2.2
FOXA1-202ENST00000545425 DCTN1Q14203 1278 aa28.81■■■□□ 2.2
FOXA1-202ENST00000545425 RTF1Q92541 710 aaKnown RBP28.81■■■□□ 2.2
FOXA1-202ENST00000545425 BABAM1Q9NWV8 329 aa28.81■■■□□ 2.2
FOXA1-202ENST00000545425 PLEKHM2Q8IWE5 1019 aa28.8■■■□□ 2.2
FOXA1-202ENST00000545425 HSP90AB1P08238 724 aaKnown RBP28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms