RNA–Protein interactions for RNA: ENST00000545038.5

DDX47-212, Transcript of DEAD-box helicase 47, humanhuman

TSL 1 (best)

Gene DDX47, Length 2,357 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-212ENST00000545038 FOXD4L3Q6VB84 417 aaPredicted RBP9.68□□□□□ -0.86
DDX47-212ENST00000545038 TSPY26PQ9H489 355 aa9.68□□□□□ -0.86
DDX47-212ENST00000545038 MBIPQ9NS73 344 aa9.68□□□□□ -0.86
DDX47-212ENST00000545038 USP25Q9UHP3 1055 aa9.68□□□□□ -0.86
DDX47-212ENST00000545038 ST18O60284 1047 aa9.68□□□□□ -0.86
DDX47-212ENST00000545038 PTMAP06454 111 aaKnown RBP9.68□□□□□ -0.86
DDX47-212ENST00000545038 CDC42BPGQ6DT37 1551 aa9.67□□□□□ -0.86
DDX47-212ENST00000545038 APBB1O00213 710 aa9.67□□□□□ -0.86
DDX47-212ENST00000545038 KRT24Q2M2I5 525 aa9.67□□□□□ -0.86
DDX47-212ENST00000545038 PPP4R3BQ5MIZ7 849 aa9.67□□□□□ -0.86
DDX47-212ENST00000545038 ZNF428Q96B54 188 aa9.67□□□□□ -0.86
DDX47-212ENST00000545038 PALD1Q9ULE6 856 aa9.67□□□□□ -0.86
DDX47-212ENST00000545038 ARHGEF40Q8TER5 1519 aa9.67□□□□□ -0.86
DDX47-212ENST00000545038 TUBGCP6Q96RT7 1819 aa9.67□□□□□ -0.86
DDX47-212ENST00000545038 MBD3O95983 291 aa9.67□□□□□ -0.86
DDX47-212ENST00000545038 ZNF853P0CG23 659 aa9.67□□□□□ -0.86
DDX47-212ENST00000545038 HMGN5P82970 282 aaKnown RBP9.67□□□□□ -0.86
DDX47-212ENST00000545038 DNTTIP2Q5QJE6 756 aaKnown RBP9.67□□□□□ -0.86
DDX47-212ENST00000545038 SENP3Q9H4L4 574 aaPredicted RBP9.67□□□□□ -0.86
DDX47-212ENST00000545038 BCL2L12Q9HB09 334 aa9.67□□□□□ -0.86
DDX47-212ENST00000545038 CHD1O14646 1710 aa9.67□□□□□ -0.86
DDX47-212ENST00000545038 RGS12O14924 1447 aa9.66□□□□□ -0.86
DDX47-212ENST00000545038 SPDYE4A6NLX3 237 aa9.66□□□□□ -0.86
DDX47-212ENST00000545038 AP5Z1O43299 807 aa9.66□□□□□ -0.86
DDX47-212ENST00000545038 HMOX1P09601 288 aa9.66□□□□□ -0.86
DDX47-212ENST00000545038 NEK4P51957 841 aa9.66□□□□□ -0.86
DDX47-212ENST00000545038 FKBP5Q13451 457 aaPredicted RBP9.66□□□□□ -0.86
DDX47-212ENST00000545038 PRIMPOLQ96LW4 560 aa9.66□□□□□ -0.86
DDX47-212ENST00000545038 PUS7Q96PZ0 661 aaKnown RBP9.66□□□□□ -0.86
DDX47-212ENST00000545038 SPTLC3Q9NUV7 552 aa9.66□□□□□ -0.86
DDX47-212ENST00000545038 NPATQ14207 1427 aa9.66□□□□□ -0.86
DDX47-212ENST00000545038 IGSF3O75054 1194 aa9.66□□□□□ -0.86
DDX47-212ENST00000545038 FCHSD2O94868 740 aa9.66□□□□□ -0.86
DDX47-212ENST00000545038 TWISTNBQ3B726 338 aaPredicted RBP9.66□□□□□ -0.86
DDX47-212ENST00000545038 CUL4AQ13619 759 aa9.65□□□□□ -0.86
DDX47-212ENST00000545038 CEP85Q6P2H3 762 aa9.65□□□□□ -0.86
DDX47-212ENST00000545038 NOL8Q76FK4 1167 aaKnown RBP9.65□□□□□ -0.86
DDX47-212ENST00000545038 FAM83GA6ND36 823 aa9.65□□□□□ -0.87
DDX47-212ENST00000545038 ADCY5O95622 1261 aa9.65□□□□□ -0.87
DDX47-212ENST00000545038 TSHZ3Q63HK5 1081 aa9.65□□□□□ -0.87
DDX47-212ENST00000545038 ANKRD44Q8N8A2 993 aa9.65□□□□□ -0.87
DDX47-212ENST00000545038 KCNF1Q9H3M0 494 aa9.65□□□□□ -0.87
DDX47-212ENST00000545038 MAP2P11137 1827 aaKnown RBP9.65□□□□□ -0.87
DDX47-212ENST00000545038 ERC2O15083 957 aa9.64□□□□□ -0.87
DDX47-212ENST00000545038 HCLS1P14317 486 aaPredicted RBP9.64□□□□□ -0.87
DDX47-212ENST00000545038 FGD1P98174 961 aa9.64□□□□□ -0.87
DDX47-212ENST00000545038 NFE2L2Q16236 605 aa9.64□□□□□ -0.87
DDX47-212ENST00000545038 USP48Q86UV5 1035 aa9.64□□□□□ -0.87
DDX47-212ENST00000545038 KIF3AQ9Y496 699 aa9.64□□□□□ -0.87
DDX47-212ENST00000545038 KIDINS220Q9ULH0 1771 aa9.64□□□□□ -0.87
DDX47-212ENST00000545038 LMTK2Q8IWU2 1503 aa9.64□□□□□ -0.87
DDX47-212ENST00000545038 U2AF2P26368 475 aaKnown RBP eCLIP9.64□□□□□ -0.871e-6■■■■□ 21.5
DDX47-212ENST00000545038 CHMP4BQ9H444 224 aaKnown RBP9.64□□□□□ -0.87
DDX47-212ENST00000545038 PYCARDQ9ULZ3 195 aa9.64□□□□□ -0.87
DDX47-212ENST00000545038 SRPK2P78362 688 aaKnown RBP9.63□□□□□ -0.87
DDX47-212ENST00000545038 DCTN1Q14203 1278 aa9.63□□□□□ -0.87
DDX47-212ENST00000545038 GTPBP4Q9BZE4 634 aaKnown RBP9.63□□□□□ -0.87
DDX47-212ENST00000545038 IFT57Q9NWB7 429 aa9.63□□□□□ -0.87
DDX47-212ENST00000545038 POLKQ9UBT6 870 aa9.63□□□□□ -0.87
DDX47-212ENST00000545038 SIGLEC1Q9BZZ2 1709 aa9.63□□□□□ -0.87
DDX47-212ENST00000545038 ABCA9Q8IUA7 1624 aa9.63□□□□□ -0.87
DDX47-212ENST00000545038 KIF20BQ96Q89 1820 aa9.63□□□□□ -0.87
DDX47-212ENST00000545038 ABCC3O15438 1527 aa9.63□□□□□ -0.87
DDX47-212ENST00000545038 ARAP3Q8WWN8 1544 aa9.63□□□□□ -0.87
DDX47-212ENST00000545038 RTL1A6NKG5 1358 aa9.63□□□□□ -0.87
DDX47-212ENST00000545038 MSH6P52701 1360 aa9.63□□□□□ -0.87
DDX47-212ENST00000545038 REC8O95072 547 aa9.63□□□□□ -0.87
DDX47-212ENST00000545038 MEIS3Q99687 375 aa9.63□□□□□ -0.87
DDX47-212ENST00000545038 IL25Q9H293 177 aa9.63□□□□□ -0.87
DDX47-212ENST00000545038 RIOK3O14730 519 aaKnown RBP9.62□□□□□ -0.87
DDX47-212ENST00000545038 TPRNQ4KMQ1 711 aa9.62□□□□□ -0.87
DDX47-212ENST00000545038 KIAA1524Q8TCG1 905 aa9.62□□□□□ -0.87
DDX47-212ENST00000545038 ANKRD7Q92527 254 aa9.62□□□□□ -0.87
DDX47-212ENST00000545038 NEXMIFQ5QGS0 1516 aa9.62□□□□□ -0.87
DDX47-212ENST00000545038 RPAP1Q9BWH6 1393 aaPredicted RBP9.62□□□□□ -0.87
DDX47-212ENST00000545038 KIF20AO95235 890 aa9.61□□□□□ -0.87
DDX47-212ENST00000545038 GNAI1P63096 354 aa9.61□□□□□ -0.87
DDX47-212ENST00000545038 UPF3BQ9BZI7 483 aaKnown RBP9.61□□□□□ -0.87
DDX47-212ENST00000545038 API5Q9BZZ5 524 aaKnown RBP9.61□□□□□ -0.87
DDX47-212ENST00000545038 STK26Q9P289 416 aa9.61□□□□□ -0.87
DDX47-212ENST00000545038 DTNBO60941 627 aa9.61□□□□□ -0.87
DDX47-212ENST00000545038 PDE1AP54750 535 aa9.61□□□□□ -0.87
DDX47-212ENST00000545038 FUCA2Q9BTY2 467 aa9.61□□□□□ -0.87
DDX47-212ENST00000545038 SRCIN1Q9C0H9 1055 aa9.61□□□□□ -0.87
DDX47-212ENST00000545038 KIF24Q5T7B8 1368 aa9.61□□□□□ -0.87
DDX47-212ENST00000545038 PTPRMP28827 1452 aa9.61□□□□□ -0.87
DDX47-212ENST00000545038 UVSSAQ2YD98 709 aa9.6□□□□□ -0.87
DDX47-212ENST00000545038 PDCL2Q8N4E4 241 aa9.6□□□□□ -0.87
DDX47-212ENST00000545038 CFAP44Q96MT7 982 aa9.6□□□□□ -0.87
DDX47-212ENST00000545038 CNPY2Q9Y2B0 182 aa9.6□□□□□ -0.87
DDX47-212ENST00000545038 MINK1Q8N4C8 1332 aaPredicted RBP9.6□□□□□ -0.87
DDX47-212ENST00000545038 CTIFO43310 598 aaKnown RBP9.6□□□□□ -0.87
DDX47-212ENST00000545038 KDM4AO75164 1064 aa9.6□□□□□ -0.87
DDX47-212ENST00000545038 GTF2E1P29083 439 aaPredicted RBP9.6□□□□□ -0.87
DDX47-212ENST00000545038 FAM184AQ8NB25 1140 aa9.6□□□□□ -0.87
DDX47-212ENST00000545038 INTS4Q96HW7 963 aaKnown RBP9.6□□□□□ -0.87
DDX47-212ENST00000545038 ESYT1Q9BSJ8 1104 aa9.6□□□□□ -0.87
DDX47-212ENST00000545038 EMILIN1Q9Y6C2 1016 aa9.6□□□□□ -0.87
DDX47-212ENST00000545038 SALL3Q9BXA9 1300 aa9.6□□□□□ -0.87
DDX47-212ENST00000545038 RIMS2Q9UQ26 1411 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms