RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 ABTB2Q8N961 1025 aa10.81□□□□□ -0.68
NECAP1-207ENST00000544891 PUS7Q96PZ0 661 aaKnown RBP10.81□□□□□ -0.68
NECAP1-207ENST00000544891 ACBD3Q9H3P7 528 aa10.81□□□□□ -0.68
NECAP1-207ENST00000544891 TWISTNBQ3B726 338 aaPredicted RBP10.81□□□□□ -0.68
NECAP1-207ENST00000544891 DISP3Q9P2K9 1392 aa10.81□□□□□ -0.68
NECAP1-207ENST00000544891 ANKRD1Q15327 319 aa10.81□□□□□ -0.68
NECAP1-207ENST00000544891 CWC22Q9HCG8 908 aaKnown RBP10.81□□□□□ -0.68
NECAP1-207ENST00000544891 MRE11P49959 708 aa10.81□□□□□ -0.68
NECAP1-207ENST00000544891 CLTCQ00610 1675 aaKnown RBP10.8□□□□□ -0.68
NECAP1-207ENST00000544891 FOXD4L5Q5VV16 416 aaPredicted RBP10.8□□□□□ -0.68
NECAP1-207ENST00000544891 FOXD4L4Q8WXT5 416 aaPredicted RBP10.8□□□□□ -0.68
NECAP1-207ENST00000544891 CCDC43Q96MW1 224 aaKnown RBP10.8□□□□□ -0.68
NECAP1-207ENST00000544891 SURF6O75683 361 aaKnown RBP10.8□□□□□ -0.68
NECAP1-207ENST00000544891 TMEM132EQ6IEE7 984 aa10.8□□□□□ -0.68
NECAP1-207ENST00000544891 KIF6Q6ZMV9 814 aa10.8□□□□□ -0.68
NECAP1-207ENST00000544891 PROSER2Q86WR7 435 aaPredicted RBP10.8□□□□□ -0.68
NECAP1-207ENST00000544891 GNL3LQ9NVN8 582 aaKnown RBP10.8□□□□□ -0.68
NECAP1-207ENST00000544891 SPATA31D1Q6ZQQ2 1576 aa10.8□□□□□ -0.68
NECAP1-207ENST00000544891 MSH5O43196 834 aa10.8□□□□□ -0.68
NECAP1-207ENST00000544891 SYTL4Q96C24 671 aaPredicted RBP10.8□□□□□ -0.68
NECAP1-207ENST00000544891 NEUROD6Q96NK8 337 aa10.8□□□□□ -0.68
NECAP1-207ENST00000544891 TMEM131LA2VDJ0 1609 aa10.8□□□□□ -0.68
NECAP1-207ENST00000544891 FCHSD2O94868 740 aa10.8□□□□□ -0.68
NECAP1-207ENST00000544891 WASHC4Q2M389 1173 aa10.8□□□□□ -0.68
NECAP1-207ENST00000544891 JMYQ8N9B5 988 aa10.8□□□□□ -0.68
NECAP1-207ENST00000544891 PRAM1Q96QH2 718 aa10.8□□□□□ -0.68
NECAP1-207ENST00000544891 FSD1Q9BTV5 496 aa10.8□□□□□ -0.68
NECAP1-207ENST00000544891 OLFM4Q6UX06 510 aa10.79□□□□□ -0.68
NECAP1-207ENST00000544891 SPG7Q9UQ90 795 aa10.79□□□□□ -0.68
NECAP1-207ENST00000544891 MEX3CQ5U5Q3 659 aaKnown RBP10.79□□□□□ -0.68
NECAP1-207ENST00000544891 ARGLU1Q9NWB6 273 aaPredicted RBP10.79□□□□□ -0.68
NECAP1-207ENST00000544891 MTERF4Q7Z6M4 381 aaKnown RBP10.79□□□□□ -0.68
NECAP1-207ENST00000544891 IL27Q8NEV9 243 aa10.79□□□□□ -0.68
NECAP1-207ENST00000544891 PCMTD1Q96MG8 357 aaPredicted RBP10.79□□□□□ -0.68
NECAP1-207ENST00000544891 ERVK-7P63135 1459 aa10.79□□□□□ -0.68
NECAP1-207ENST00000544891 CCP110O43303 1012 aa10.79□□□□□ -0.68
NECAP1-207ENST00000544891 NBPF1Q3BBV0 1214 aa10.79□□□□□ -0.68
NECAP1-207ENST00000544891 ZSCAN25Q6NSZ9 544 aa10.79□□□□□ -0.68
NECAP1-207ENST00000544891 TESK2Q96S53 571 aa10.79□□□□□ -0.68
NECAP1-207ENST00000544891 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.79□□□□□ -0.68
NECAP1-207ENST00000544891 KLHL34Q8N239 644 aa10.78□□□□□ -0.68
NECAP1-207ENST00000544891 ZNF396Q96N95 335 aaPredicted RBP10.78□□□□□ -0.68
NECAP1-207ENST00000544891 ABCC11Q96J66 1382 aa10.78□□□□□ -0.68
NECAP1-207ENST00000544891 SETQ01105 290 aaPredicted RBP10.78□□□□□ -0.68
NECAP1-207ENST00000544891 ANKLE2Q86XL3 938 aa10.78□□□□□ -0.68
NECAP1-207ENST00000544891 AEBP1Q8IUX7 1158 aa10.78□□□□□ -0.68
NECAP1-207ENST00000544891 TSPOAP1O95153 1857 aa10.78□□□□□ -0.68
NECAP1-207ENST00000544891 EXOSC9Q06265 439 aaKnown RBP10.78□□□□□ -0.68
NECAP1-207ENST00000544891 TEX35Q5T0J7 233 aa10.78□□□□□ -0.68
NECAP1-207ENST00000544891 PANK1Q8TE04 598 aa10.78□□□□□ -0.68
NECAP1-207ENST00000544891 HDGFL1Q5TGJ6 251 aa10.78□□□□□ -0.68
NECAP1-207ENST00000544891 ARHGEF28Q8N1W1 1705 aaKnown RBP10.77□□□□□ -0.68
NECAP1-207ENST00000544891 RPAP2Q8IXW5 612 aaPredicted RBP10.77□□□□□ -0.68
NECAP1-207ENST00000544891 C14orf93Q9H972 538 aaKnown RBP10.77□□□□□ -0.68
NECAP1-207ENST00000544891 LRPPRCP42704 1394 aaKnown RBP10.77□□□□□ -0.69
NECAP1-207ENST00000544891 HSP90AA2PQ14568 343 aaPredicted RBP10.77□□□□□ -0.69
NECAP1-207ENST00000544891 CCDC158Q5M9N0 1113 aa10.77□□□□□ -0.69
NECAP1-207ENST00000544891 NECTIN2Q92692 538 aa10.77□□□□□ -0.69
NECAP1-207ENST00000544891 ADGRB1O14514 1584 aa10.77□□□□□ -0.69
NECAP1-207ENST00000544891 TXLNAP40222 546 aa10.77□□□□□ -0.69
NECAP1-207ENST00000544891 HOMER1Q86YM7 354 aa10.77□□□□□ -0.69
NECAP1-207ENST00000544891 SDF4Q9BRK5 362 aa10.77□□□□□ -0.69
NECAP1-207ENST00000544891 CIZ1Q9ULV3 898 aaPredicted RBP10.77□□□□□ -0.69
NECAP1-207ENST00000544891 YEATS2Q9ULM3 1422 aa10.77□□□□□ -0.69
NECAP1-207ENST00000544891 BRD2P25440 801 aaKnown RBP10.76□□□□□ -0.69
NECAP1-207ENST00000544891 KCNH5Q8NCM2 988 aa10.76□□□□□ -0.69
NECAP1-207ENST00000544891 CDK19Q9BWU1 502 aa10.76□□□□□ -0.69
NECAP1-207ENST00000544891 CCDC39Q9UFE4 941 aa10.76□□□□□ -0.69
NECAP1-207ENST00000544891 ATF7IPQ6VMQ6 1270 aa10.76□□□□□ -0.69
NECAP1-207ENST00000544891 NACAP1Q9BZK3 213 aa10.76□□□□□ -0.69
NECAP1-207ENST00000544891 DLC1Q96QB1 1528 aa10.76□□□□□ -0.69
NECAP1-207ENST00000544891 RDXP35241 583 aaKnown RBP10.76□□□□□ -0.69
NECAP1-207ENST00000544891 MAP7D2Q96T17 732 aa10.76□□□□□ -0.69
NECAP1-207ENST00000544891 CCDC61Q9Y6R9 512 aa10.76□□□□□ -0.69
NECAP1-207ENST00000544891 CCDC173Q0VFZ6 552 aa10.75□□□□□ -0.69
NECAP1-207ENST00000544891 ESCO1Q5FWF5 840 aa10.75□□□□□ -0.69
NECAP1-207ENST00000544891 KINO60870 393 aaKnown RBP10.75□□□□□ -0.69
NECAP1-207ENST00000544891 BLMP54132 1417 aaPredicted RBP10.75□□□□□ -0.69
NECAP1-207ENST00000544891 AIMP1Q12904 312 aaKnown RBP10.75□□□□□ -0.69
NECAP1-207ENST00000544891 KRT32Q14532 448 aa10.75□□□□□ -0.69
NECAP1-207ENST00000544891 CCAR2Q8N163 923 aaKnown RBP10.75□□□□□ -0.69
NECAP1-207ENST00000544891 CTNNA3Q9UI47 895 aa10.75□□□□□ -0.69
NECAP1-207ENST00000544891 FILIP1LQ4L180 1135 aa10.74□□□□□ -0.69
NECAP1-207ENST00000544891 PDZRN3Q9UPQ7 1066 aa10.74□□□□□ -0.69
NECAP1-207ENST00000544891 R3HCC1Q9Y3T6 440 aaKnown RBP10.74□□□□□ -0.69
NECAP1-207ENST00000544891 NSD2O96028 1365 aa10.74□□□□□ -0.69
NECAP1-207ENST00000544891 ZSCAN31Q96LW9 406 aaPredicted RBP10.74□□□□□ -0.69
NECAP1-207ENST00000544891 LRRCC1Q9C099 1032 aa10.74□□□□□ -0.69
NECAP1-207ENST00000544891 RAPGEF3O95398 923 aa10.74□□□□□ -0.69
NECAP1-207ENST00000544891 ERCC4Q92889 916 aaPredicted RBP10.74□□□□□ -0.69
NECAP1-207ENST00000544891 SLC12A5Q9H2X9 1139 aa10.74□□□□□ -0.69
NECAP1-207ENST00000544891 KNDC1Q76NI1 1749 aa10.74□□□□□ -0.69
NECAP1-207ENST00000544891 SULT6B1Q6IMI4 303 aa10.74□□□□□ -0.69
NECAP1-207ENST00000544891 ZNF530Q6P9A1 599 aaPredicted RBP10.74□□□□□ -0.69
NECAP1-207ENST00000544891 TXLNBQ8N3L3 684 aa10.74□□□□□ -0.69
NECAP1-207ENST00000544891 MVPQ14764 893 aaKnown RBP10.73□□□□□ -0.69
NECAP1-207ENST00000544891 FAM43AQ8N2R8 423 aa10.73□□□□□ -0.69
NECAP1-207ENST00000544891 MYO6Q9UM54 1294 aa10.73□□□□□ -0.69
NECAP1-207ENST00000544891 WDR33Q9C0J8 1336 aaKnown RBP10.73□□□□□ -0.69
NECAP1-207ENST00000544891 SLC4A3P48751 1232 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms