RNA–Protein interactions for RNA: ENST00000544866.5

PDCD2-213, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-213ENST00000544866 TATP17735 454 aaPredicted RBP22.73■■□□□ 1.23
PDCD2-213ENST00000544866 ZCRB1Q8TBF4 217 aaKnown RBP22.73■■□□□ 1.23
PDCD2-213ENST00000544866 KAT6BQ8WYB5 2073 aa22.73■■□□□ 1.23
PDCD2-213ENST00000544866 NHSQ6T4R5 1651 aa22.71■■□□□ 1.23
PDCD2-213ENST00000544866 DIAPH1O60610 1272 aaKnown RBP22.71■■□□□ 1.23
PDCD2-213ENST00000544866 AEBP1Q8IUX7 1158 aa22.71■■□□□ 1.23
PDCD2-213ENST00000544866 KDRP35968 1356 aa22.71■■□□□ 1.23
PDCD2-213ENST00000544866 TRIM37O94972 964 aa22.7■■□□□ 1.22
PDCD2-213ENST00000544866 PLEKHG2Q9H7P9 1386 aa22.7■■□□□ 1.22
PDCD2-213ENST00000544866 DOT1LQ8TEK3 1739 aa22.69■■□□□ 1.22
PDCD2-213ENST00000544866 RALBP1Q15311 655 aa22.69■■□□□ 1.22
PDCD2-213ENST00000544866 DDX54Q8TDD1 881 aaKnown RBP22.69■■□□□ 1.22
PDCD2-213ENST00000544866 SULT6B1Q6IMI4 303 aa22.67■■□□□ 1.22
PDCD2-213ENST00000544866 PCDH11XQ9BZA7 1347 aa22.66■■□□□ 1.22
PDCD2-213ENST00000544866 PCDH11YQ9BZA8 1340 aa22.66■■□□□ 1.22
PDCD2-213ENST00000544866 CFAP53Q96M91 514 aa22.66■■□□□ 1.22
PDCD2-213ENST00000544866 TOGARAM1Q9Y4F4 1720 aa22.65■■□□□ 1.22
PDCD2-213ENST00000544866 SF3B2Q13435 895 aaKnown RBP22.65■■□□□ 1.22
PDCD2-213ENST00000544866 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.65■■□□□ 1.22
PDCD2-213ENST00000544866 CYP27B1O15528 508 aa22.64■■□□□ 1.21
PDCD2-213ENST00000544866 PTF1AQ7RTS3 328 aa22.64■■□□□ 1.21
PDCD2-213ENST00000544866 DEFB132Q7Z7B7 95 aa22.64■■□□□ 1.21
PDCD2-213ENST00000544866 BTAF1O14981 1849 aa22.64■■□□□ 1.21
PDCD2-213ENST00000544866 RGPD3A6NKT7 1758 aaPredicted RBP22.63■■□□□ 1.21
PDCD2-213ENST00000544866 RGPD4Q7Z3J3 1758 aa22.63■■□□□ 1.21
PDCD2-213ENST00000544866 SPG7Q9UQ90 795 aa22.63■■□□□ 1.21
PDCD2-213ENST00000544866 HMOX1P09601 288 aa22.62■■□□□ 1.21
PDCD2-213ENST00000544866 BCL11BQ9C0K0 894 aaPredicted RBP22.62■■□□□ 1.21
PDCD2-213ENST00000544866 PRKRIP1Q9H875 184 aaPredicted RBP22.62■■□□□ 1.21
PDCD2-213ENST00000544866 KCNQ2O43526 872 aa22.61■■□□□ 1.21
PDCD2-213ENST00000544866 BAG6P46379 1132 aa22.61■■□□□ 1.21
PDCD2-213ENST00000544866 ACSBG1Q96GR2 724 aa22.61■■□□□ 1.21
PDCD2-213ENST00000544866 ITGB4P16144 1822 aa22.61■■□□□ 1.21
PDCD2-213ENST00000544866 RREB1Q92766 1687 aa22.61■■□□□ 1.21
PDCD2-213ENST00000544866 MYBBP1AQ9BQG0 1328 aaKnown RBP22.6■■□□□ 1.21
PDCD2-213ENST00000544866 U2SURPO15042 1029 aaKnown RBP22.6■■□□□ 1.21
PDCD2-213ENST00000544866 APBA3O96018 575 aa22.59■■□□□ 1.21
PDCD2-213ENST00000544866 EN1Q05925 392 aaPredicted RBP22.58■■□□□ 1.21
PDCD2-213ENST00000544866 NKX1-1Q15270 411 aaPredicted RBP22.58■■□□□ 1.21
PDCD2-213ENST00000544866 PLEKHO1Q53GL0 409 aaPredicted RBP22.58■■□□□ 1.21
PDCD2-213ENST00000544866 VIRMAQ69YN4 1812 aaKnown RBP22.58■■□□□ 1.21
PDCD2-213ENST00000544866 PHKG2P15735 406 aa22.57■■□□□ 1.2
PDCD2-213ENST00000544866 AMOTQ4VCS5 1084 aa22.57■■□□□ 1.2
PDCD2-213ENST00000544866 NUDCQ9Y266 331 aa22.57■■□□□ 1.2
PDCD2-213ENST00000544866 IFNL2Q8IZJ0 200 aa22.56■■□□□ 1.2
PDCD2-213ENST00000544866 CAMKK2Q96RR4 588 aa22.56■■□□□ 1.2
PDCD2-213ENST00000544866 NUP188Q5SRE5 1749 aa22.55■■□□□ 1.2
PDCD2-213ENST00000544866 SCN11AQ9UI33 1791 aa22.54■■□□□ 1.2
PDCD2-213ENST00000544866 PRIM1P49642 420 aaKnown RBP22.54■■□□□ 1.2
PDCD2-213ENST00000544866 ZNF530Q6P9A1 599 aaPredicted RBP22.54■■□□□ 1.2
PDCD2-213ENST00000544866 RSPH6AQ9H0K4 717 aa22.54■■□□□ 1.2
PDCD2-213ENST00000544866 EZH2Q15910 746 aaKnown RBP22.53■■□□□ 1.2
PDCD2-213ENST00000544866 PLSCR1O15162 318 aa22.52■■□□□ 1.2
PDCD2-213ENST00000544866 U2AF1L5P0DN76 240 aaPredicted RBP22.52■■□□□ 1.2
PDCD2-213ENST00000544866 U2AF1Q01081 240 aaKnown RBP eCLIP22.52■■□□□ 1.2
PDCD2-213ENST00000544866 LY75O60449 1722 aa22.51■■□□□ 1.19
PDCD2-213ENST00000544866 KDM6AO15550 1401 aaPredicted RBP22.51■■□□□ 1.19
PDCD2-213ENST00000544866 SYTL4Q96C24 671 aaPredicted RBP22.51■■□□□ 1.19
PDCD2-213ENST00000544866 ADAMTS7Q9UKP4 1686 aa22.5■■□□□ 1.19
PDCD2-213ENST00000544866 PRKAR2BP31323 418 aa22.5■■□□□ 1.19
PDCD2-213ENST00000544866 MTHFSDQ2M296 383 aaKnown RBP22.49■■□□□ 1.19
PDCD2-213ENST00000544866 FCHSD2O94868 740 aa22.48■■□□□ 1.19
PDCD2-213ENST00000544866 HSP90AB1P08238 724 aaKnown RBP22.48■■□□□ 1.19
PDCD2-213ENST00000544866 AKAP4Q5JQC9 854 aa22.47■■□□□ 1.19
PDCD2-213ENST00000544866 C1orf141Q5JVX7 400 aa22.47■■□□□ 1.19
PDCD2-213ENST00000544866 PROM2Q8N271 834 aa22.47■■□□□ 1.19
PDCD2-213ENST00000544866 DCAF5Q96JK2 942 aa22.47■■□□□ 1.19
PDCD2-213ENST00000544866 PHACTR3Q96KR7 559 aa22.47■■□□□ 1.19
PDCD2-213ENST00000544866 MPRIPQ6WCQ1 1025 aa22.45■■□□□ 1.18
PDCD2-213ENST00000544866 DLG5Q8TDM6 1919 aa22.45■■□□□ 1.18
PDCD2-213ENST00000544866 TXNRD1Q16881 649 aa22.44■■□□□ 1.18
PDCD2-213ENST00000544866 ERVV-2B6SEH9 535 aa22.43■■□□□ 1.18
PDCD2-213ENST00000544866 ANP32CO43423 234 aa22.43■■□□□ 1.18
PDCD2-213ENST00000544866 GAS2L2Q8NHY3 880 aa22.43■■□□□ 1.18
PDCD2-213ENST00000544866 PIGBQ92521 554 aa22.43■■□□□ 1.18
PDCD2-213ENST00000544866 PAPPAQ13219 1627 aa22.42■■□□□ 1.18
PDCD2-213ENST00000544866 MRC1P22897 1456 aa22.42■■□□□ 1.18
PDCD2-213ENST00000544866 PLEKHF1Q96S99 279 aa22.41■■□□□ 1.18
PDCD2-213ENST00000544866 TMOD3Q9NYL9 352 aa22.41■■□□□ 1.18
PDCD2-213ENST00000544866 SIPA1L3O60292 1781 aaPredicted RBP22.4■■□□□ 1.18
PDCD2-213ENST00000544866 MAP3K5Q99683 1374 aa22.4■■□□□ 1.18
PDCD2-213ENST00000544866 LGR6Q9HBX8 967 aa22.4■■□□□ 1.18
PDCD2-213ENST00000544866 TAF1LQ8IZX4 1826 aa22.39■■□□□ 1.17
PDCD2-213ENST00000544866 RNMTO43148 476 aaKnown RBP22.39■■□□□ 1.17
PDCD2-213ENST00000544866 CCDC184Q52MB2 194 aa22.39■■□□□ 1.17
PDCD2-213ENST00000544866 PALLDQ8WX93 1383 aa22.38■■□□□ 1.17
PDCD2-213ENST00000544866 GNAT3A8MTJ3 354 aa22.37■■□□□ 1.17
PDCD2-213ENST00000544866 CABP4P57796 275 aa22.37■■□□□ 1.17
PDCD2-213ENST00000544866 LRRC4BQ9NT99 713 aa22.37■■□□□ 1.17
PDCD2-213ENST00000544866 ASAP1Q9ULH1 1129 aa22.36■■□□□ 1.17
PDCD2-213ENST00000544866 C5P01031 1676 aa22.36■■□□□ 1.17
PDCD2-213ENST00000544866 WDR43Q15061 677 aaKnown RBP eCLIP22.35■■□□□ 1.17
PDCD2-213ENST00000544866 SLC27A3Q5K4L6 730 aa22.35■■□□□ 1.17
PDCD2-213ENST00000544866 NFATC2IPQ8NCF5 419 aa22.35■■□□□ 1.17
PDCD2-213ENST00000544866 SMARCC1Q92922 1105 aaPredicted RBP22.35■■□□□ 1.17
PDCD2-213ENST00000544866 PNNQ9H307 717 aaKnown RBP22.35■■□□□ 1.17
PDCD2-213ENST00000544866 SLC52A2Q9HAB3 445 aa22.35■■□□□ 1.17
PDCD2-213ENST00000544866 ANO8Q9HCE9 1232 aaPredicted RBP22.35■■□□□ 1.17
PDCD2-213ENST00000544866 ATG3Q9NT62 314 aa22.35■■□□□ 1.17
PDCD2-213ENST00000544866 ZNF831Q5JPB2 1677 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms