RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 NBPF4Q96M43 638 aa4.72□□□□□ -1.65
BRCA2-206ENST00000544455 CEP170BQ9Y4F5 1589 aaPredicted RBP4.71□□□□□ -1.65
BRCA2-206ENST00000544455 TBC1D9Q6ZT07 1266 aa4.71□□□□□ -1.65
BRCA2-206ENST00000544455 LMOD3Q0VAK6 560 aa4.71□□□□□ -1.66
BRCA2-206ENST00000544455 PHF8Q9UPP1 1060 aa4.71□□□□□ -1.66
BRCA2-206ENST00000544455 CHL1O00533 1208 aa4.71□□□□□ -1.66
BRCA2-206ENST00000544455 GSE1Q14687 1217 aa4.71□□□□□ -1.66
BRCA2-206ENST00000544455 IL17REQ8NFR9 667 aa4.71□□□□□ -1.66
BRCA2-206ENST00000544455 ABCC4O15439 1325 aa4.71□□□□□ -1.66
BRCA2-206ENST00000544455 CALD1Q05682 793 aaKnown RBP4.71□□□□□ -1.66
BRCA2-206ENST00000544455 PSME1Q06323 249 aa4.71□□□□□ -1.66
BRCA2-206ENST00000544455 OVOS2A0A0J9YW53 1432 aa4.71□□□□□ -1.66
BRCA2-206ENST00000544455 OVOS2Q6IE36 1432 aa4.71□□□□□ -1.66
BRCA2-206ENST00000544455 TBX22Q9Y458 520 aa4.71□□□□□ -1.66
BRCA2-206ENST00000544455 CDK12Q9NYV4 1490 aaPredicted RBP4.71□□□□□ -1.66
BRCA2-206ENST00000544455 TPRNQ4KMQ1 711 aa4.71□□□□□ -1.66
BRCA2-206ENST00000544455 FLT4P35916 1363 aa4.7□□□□□ -1.66
BRCA2-206ENST00000544455 GNAT3A8MTJ3 354 aa4.7□□□□□ -1.66
BRCA2-206ENST00000544455 PNMA6EA0A0J9YXQ4 647 aa4.7□□□□□ -1.66
BRCA2-206ENST00000544455 SIRT1Q96EB6 747 aa4.7□□□□□ -1.66
BRCA2-206ENST00000544455 IL1RAPL2Q9NP60 686 aa4.7□□□□□ -1.66
BRCA2-206ENST00000544455 BECN1Q14457 450 aa4.7□□□□□ -1.66
BRCA2-206ENST00000544455 CEP85Q6P2H3 762 aa4.7□□□□□ -1.66
BRCA2-206ENST00000544455 API5Q9BZZ5 524 aaKnown RBP4.7□□□□□ -1.66
BRCA2-206ENST00000544455 FOXD4L5Q5VV16 416 aaPredicted RBP4.7□□□□□ -1.66
BRCA2-206ENST00000544455 FOXD4L4Q8WXT5 416 aaPredicted RBP4.7□□□□□ -1.66
BRCA2-206ENST00000544455 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.7□□□□□ -1.66
BRCA2-206ENST00000544455 JARID2Q92833 1246 aaPredicted RBP4.7□□□□□ -1.66
BRCA2-206ENST00000544455 CHAMP1Q96JM3 812 aa4.7□□□□□ -1.66
BRCA2-206ENST00000544455 AXIN2Q9Y2T1 843 aa4.7□□□□□ -1.66
BRCA2-206ENST00000544455 PLEKHM2Q8IWE5 1019 aa4.7□□□□□ -1.66
BRCA2-206ENST00000544455 ARHGAP45Q92619 1136 aa4.69□□□□□ -1.66
BRCA2-206ENST00000544455 IGSF1Q8N6C5 1336 aa4.69□□□□□ -1.66
BRCA2-206ENST00000544455 HSPA2P54652 639 aa4.69□□□□□ -1.66
BRCA2-206ENST00000544455 TECPR2O15040 1411 aa4.69□□□□□ -1.66
BRCA2-206ENST00000544455 ANKLE2Q86XL3 938 aa4.69□□□□□ -1.66
BRCA2-206ENST00000544455 GCC1Q96CN9 775 aa4.69□□□□□ -1.66
BRCA2-206ENST00000544455 CRB1P82279 1406 aa4.69□□□□□ -1.66
BRCA2-206ENST00000544455 PIK3R4Q99570 1358 aa4.69□□□□□ -1.66
BRCA2-206ENST00000544455 NUTM1Q86Y26 1132 aa4.69□□□□□ -1.66
BRCA2-206ENST00000544455 LARP6Q9BRS8 491 aaKnown RBP4.69□□□□□ -1.66
BRCA2-206ENST00000544455 SBNO1A3KN83 1393 aa4.69□□□□□ -1.66
BRCA2-206ENST00000544455 FLIIQ13045 1269 aa4.69□□□□□ -1.66
BRCA2-206ENST00000544455 NCBP3Q53F19 620 aaKnown RBP4.69□□□□□ -1.66
BRCA2-206ENST00000544455 PROSER2Q86WR7 435 aaPredicted RBP4.69□□□□□ -1.66
BRCA2-206ENST00000544455 REREQ9P2R6 1566 aa4.69□□□□□ -1.66
BRCA2-206ENST00000544455 AIMP1Q12904 312 aaKnown RBP4.69□□□□□ -1.66
BRCA2-206ENST00000544455 CHRNA2Q15822 529 aa4.69□□□□□ -1.66
BRCA2-206ENST00000544455 RILPL2Q969X0 211 aa4.69□□□□□ -1.66
BRCA2-206ENST00000544455 STK31Q9BXU1 1019 aa4.69□□□□□ -1.66
BRCA2-206ENST00000544455 SLC39A6Q13433 755 aa4.69□□□□□ -1.66
BRCA2-206ENST00000544455 KIF2CQ99661 725 aa4.69□□□□□ -1.66
BRCA2-206ENST00000544455 CHPF2Q9P2E5 772 aa4.69□□□□□ -1.66
BRCA2-206ENST00000544455 RGS12O14924 1447 aa4.68□□□□□ -1.66
BRCA2-206ENST00000544455 HSP90AA1P07900 732 aaKnown RBP4.68□□□□□ -1.66
BRCA2-206ENST00000544455 HSP90AB1P08238 724 aaKnown RBP4.68□□□□□ -1.66
BRCA2-206ENST00000544455 INTS3Q68E01 1043 aaKnown RBP4.68□□□□□ -1.66
BRCA2-206ENST00000544455 HSCBQ8IWL3 235 aa4.68□□□□□ -1.66
BRCA2-206ENST00000544455 SSH2Q76I76 1423 aa4.68□□□□□ -1.66
BRCA2-206ENST00000544455 ANTXR1Q9H6X2 564 aa4.68□□□□□ -1.66
BRCA2-206ENST00000544455 USP31Q70CQ4 1352 aa4.68□□□□□ -1.66
BRCA2-206ENST00000544455 PTCH1Q13635 1447 aa4.68□□□□□ -1.66
BRCA2-206ENST00000544455 LRRFIP2Q9Y608 721 aaKnown RBP4.68□□□□□ -1.66
BRCA2-206ENST00000544455 PEAK1Q9H792 1746 aa4.68□□□□□ -1.66
BRCA2-206ENST00000544455 RTL1A6NKG5 1358 aa4.68□□□□□ -1.66
BRCA2-206ENST00000544455 BRPF1P55201 1214 aaPredicted RBP4.68□□□□□ -1.66
BRCA2-206ENST00000544455 ANKRD44Q8N8A2 993 aa4.68□□□□□ -1.66
BRCA2-206ENST00000544455 RIMS1Q86UR5 1692 aaKnown RBP4.68□□□□□ -1.66
BRCA2-206ENST00000544455 TTC21AQ8NDW8 1320 aa4.68□□□□□ -1.66
BRCA2-206ENST00000544455 GCP02774 474 aa4.68□□□□□ -1.66
BRCA2-206ENST00000544455 NBPF7P0C2Y1 421 aaPredicted RBP4.68□□□□□ -1.66
BRCA2-206ENST00000544455 AAMPQ13685 434 aa4.68□□□□□ -1.66
BRCA2-206ENST00000544455 PROSER3Q2NL68 480 aa4.68□□□□□ -1.66
BRCA2-206ENST00000544455 TTC22Q5TAA0 569 aa4.68□□□□□ -1.66
BRCA2-206ENST00000544455 DCTPP1Q9H773 170 aa4.68□□□□□ -1.66
BRCA2-206ENST00000544455 TRIM6-TRIM34B2RNG4 842 aa4.67□□□□□ -1.66
BRCA2-206ENST00000544455 SDSP20132 328 aa4.67□□□□□ -1.66
BRCA2-206ENST00000544455 FOXD4L6Q3SYB3 417 aaPredicted RBP4.67□□□□□ -1.66
BRCA2-206ENST00000544455 BMP2KLQ5H9B9 411 aa4.67□□□□□ -1.66
BRCA2-206ENST00000544455 HDGFL1Q5TGJ6 251 aa4.67□□□□□ -1.66
BRCA2-206ENST00000544455 FOXD4L3Q6VB84 417 aaPredicted RBP4.67□□□□□ -1.66
BRCA2-206ENST00000544455 GAS2L2Q8NHY3 880 aa4.67□□□□□ -1.66
BRCA2-206ENST00000544455 CWF19L2Q2TBE0 894 aaKnown RBP4.67□□□□□ -1.66
BRCA2-206ENST00000544455 BTBD11A6QL63 1104 aa4.67□□□□□ -1.66
BRCA2-206ENST00000544455 ZNF530Q6P9A1 599 aaPredicted RBP4.67□□□□□ -1.66
BRCA2-206ENST00000544455 IL25Q9H293 177 aa4.67□□□□□ -1.66
BRCA2-206ENST00000544455 SETD1AO15047 1707 aaKnown RBP4.67□□□□□ -1.66
BRCA2-206ENST00000544455 PKP1Q13835 747 aa4.67□□□□□ -1.66
BRCA2-206ENST00000544455 UNC5CLQ8IV45 518 aa4.67□□□□□ -1.66
BRCA2-206ENST00000544455 DIP2AQ14689 1571 aa4.67□□□□□ -1.66
BRCA2-206ENST00000544455 TAF7Q15545 349 aaPredicted RBP4.67□□□□□ -1.66
BRCA2-206ENST00000544455 CCDC9Q9Y3X0 531 aaKnown RBP4.67□□□□□ -1.66
BRCA2-206ENST00000544455 CDC45O75419 566 aa4.67□□□□□ -1.66
BRCA2-206ENST00000544455 CCDC30Q5VVM6 783 aa4.67□□□□□ -1.66
BRCA2-206ENST00000544455 ANKRD24Q8TF21 1146 aa4.67□□□□□ -1.66
BRCA2-206ENST00000544455 USP35Q9P2H5 1018 aa4.67□□□□□ -1.66
BRCA2-206ENST00000544455 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.67□□□□□ -1.66
BRCA2-206ENST00000544455 KRT28Q7Z3Y7 464 aa4.67□□□□□ -1.66
BRCA2-206ENST00000544455 UBR1Q8IWV7 1749 aa4.67□□□□□ -1.66
BRCA2-206ENST00000544455 MYL6BP14649 208 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms