RNA–Protein interactions for RNA: ENST00000543754.1

PUS1-209, Transcript of pseudouridylate synthase 1, humanhuman

TSL 2

Gene PUS1, Length 1,378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUS1-209ENST00000543754 DCAF8L1A6NGE4 600 aa15.5■□□□□ 0.07
PUS1-209ENST00000543754 PRIM1P49642 420 aaKnown RBP15.5■□□□□ 0.07
PUS1-209ENST00000543754 MAP3K5Q99683 1374 aa15.5■□□□□ 0.07
PUS1-209ENST00000543754 ANKRD36BQ8N2N9 1353 aa15.49■□□□□ 0.07
PUS1-209ENST00000543754 RRS1Q15050 365 aaKnown RBP15.49■□□□□ 0.07
PUS1-209ENST00000543754 NBPF6Q5VWK0 638 aa15.49■□□□□ 0.07
PUS1-209ENST00000543754 USHBP1Q8N6Y0 703 aa15.49■□□□□ 0.07
PUS1-209ENST00000543754 NBPF4Q96M43 638 aa15.49■□□□□ 0.07
PUS1-209ENST00000543754 PCGF6Q9BYE7 350 aa15.49■□□□□ 0.07
PUS1-209ENST00000543754 TIMELESSQ9UNS1 1208 aa15.48■□□□□ 0.07
PUS1-209ENST00000543754 FYB1O15117 783 aa15.47■□□□□ 0.07
PUS1-209ENST00000543754 NLGN2Q8NFZ4 835 aa15.47■□□□□ 0.07
PUS1-209ENST00000543754 SYTL4Q96C24 671 aaPredicted RBP15.47■□□□□ 0.07
PUS1-209ENST00000543754 COG3Q96JB2 828 aa15.47■□□□□ 0.07
PUS1-209ENST00000543754 GGNBP2Q9H3C7 697 aa15.47■□□□□ 0.07
PUS1-209ENST00000543754 AMPHP49418 695 aa15.46■□□□□ 0.07
PUS1-209ENST00000543754 SLC27A3Q5K4L6 730 aa15.46■□□□□ 0.07
PUS1-209ENST00000543754 ZCRB1Q8TBF4 217 aaKnown RBP15.46■□□□□ 0.07
PUS1-209ENST00000543754 TOGARAM1Q9Y4F4 1720 aa15.43■□□□□ 0.06
PUS1-209ENST00000543754 GOLGB1Q14789 3259 aaKnown RBP15.43■□□□□ 0.06
PUS1-209ENST00000543754 COL23A1Q86Y22 540 aaPredicted RBP15.43■□□□□ 0.06
PUS1-209ENST00000543754 SLC16A10Q8TF71 515 aa15.43■□□□□ 0.06
PUS1-209ENST00000543754 RTL1A6NKG5 1358 aa15.43■□□□□ 0.06
PUS1-209ENST00000543754 HSP90AB2PQ58FF8 381 aa15.42■□□□□ 0.06
PUS1-209ENST00000543754 AMIGO3Q86WK7 504 aa15.42■□□□□ 0.06
PUS1-209ENST00000543754 KLHL34Q8N239 644 aa15.42■□□□□ 0.06
PUS1-209ENST00000543754 TFCP2L1Q9NZI6 479 aa15.42■□□□□ 0.06
PUS1-209ENST00000543754 CARD14Q9BXL6 1004 aa15.41■□□□□ 0.06
PUS1-209ENST00000543754 CCNL1Q9UK58 526 aaPredicted RBP15.41■□□□□ 0.06
PUS1-209ENST00000543754 TAF1LQ8IZX4 1826 aa15.41■□□□□ 0.06
PUS1-209ENST00000543754 KIF20BQ96Q89 1820 aa15.41■□□□□ 0.06
PUS1-209ENST00000543754 SLC24A1O60721 1099 aa15.4■□□□□ 0.06
PUS1-209ENST00000543754 YBX3P16989 372 aaKnown RBP eCLIP15.4■□□□□ 0.06
PUS1-209ENST00000543754 SMIM5Q71RC9 77 aa15.4■□□□□ 0.06
PUS1-209ENST00000543754 C5P01031 1676 aa15.4■□□□□ 0.06
PUS1-209ENST00000543754 CYP27B1O15528 508 aa15.39■□□□□ 0.05
PUS1-209ENST00000543754 GPR162Q16538 588 aa15.39■□□□□ 0.05
PUS1-209ENST00000543754 MSL1Q68DK7 614 aa15.39■□□□□ 0.05
PUS1-209ENST00000543754 USP47Q96K76 1375 aa15.39■□□□□ 0.05
PUS1-209ENST00000543754 ITGB4P16144 1822 aa15.39■□□□□ 0.05
PUS1-209ENST00000543754 INSRP06213 1382 aa15.38■□□□□ 0.05
PUS1-209ENST00000543754 POLD1P28340 1107 aa15.37■□□□□ 0.05
PUS1-209ENST00000543754 C1QTNF8P60827 252 aa15.37■□□□□ 0.05
PUS1-209ENST00000543754 PELP1Q8IZL8 1130 aaKnown RBP15.37■□□□□ 0.05
PUS1-209ENST00000543754 EMILIN1Q9Y6C2 1016 aa15.37■□□□□ 0.05
PUS1-209ENST00000543754 PKD1L3Q7Z443 1732 aa15.37■□□□□ 0.05
PUS1-209ENST00000543754 NCAPD2Q15021 1401 aa15.36■□□□□ 0.05
PUS1-209ENST00000543754 MAP2P11137 1827 aaKnown RBP15.35■□□□□ 0.05
PUS1-209ENST00000543754 TATP17735 454 aaPredicted RBP15.35■□□□□ 0.05
PUS1-209ENST00000543754 TMF1P82094 1093 aa15.35■□□□□ 0.05
PUS1-209ENST00000543754 CCER1Q8TC90 406 aaPredicted RBP15.35■□□□□ 0.05
PUS1-209ENST00000543754 RAPGEF4Q8WZA2 1011 aa15.35■□□□□ 0.05
PUS1-209ENST00000543754 FLT4P35916 1363 aa15.34■□□□□ 0.05
PUS1-209ENST00000543754 PALLDQ8WX93 1383 aa15.34■□□□□ 0.05
PUS1-209ENST00000543754 C4BP0C0L5 1744 aa15.34■□□□□ 0.05
PUS1-209ENST00000543754 ANKRD26Q9UPS8 1709 aa15.34■□□□□ 0.05
PUS1-209ENST00000543754 CGNL1Q0VF96 1302 aa15.34■□□□□ 0.05
PUS1-209ENST00000543754 MSH5O43196 834 aa15.34■□□□□ 0.05
PUS1-209ENST00000543754 UBR3Q6ZT12 1888 aa15.33■□□□□ 0.05
PUS1-209ENST00000543754 NSD3Q9BZ95 1437 aa15.33■□□□□ 0.04
PUS1-209ENST00000543754 SENP3-EIF4A1A0A087X0R7 540 aa15.33■□□□□ 0.04
PUS1-209ENST00000543754 MPRIPQ6WCQ1 1025 aa15.33■□□□□ 0.04
PUS1-209ENST00000543754 PCDH11XQ9BZA7 1347 aa15.32■□□□□ 0.04
PUS1-209ENST00000543754 PCDH11YQ9BZA8 1340 aa15.32■□□□□ 0.04
PUS1-209ENST00000543754 PIGBQ92521 554 aa15.32■□□□□ 0.04
PUS1-209ENST00000543754 SMG6Q86US8 1419 aaKnown RBP15.32■□□□□ 0.04
PUS1-209ENST00000543754 KIF24Q5T7B8 1368 aa15.3■□□□□ 0.04
PUS1-209ENST00000543754 NKX1-1Q15270 411 aaPredicted RBP15.29■□□□□ 0.04
PUS1-209ENST00000543754 LINC00116Q8NCU8 138 aa15.29■□□□□ 0.04
PUS1-209ENST00000543754 EYA1Q99502 592 aa15.29■□□□□ 0.04
PUS1-209ENST00000543754 ITPK1Q13572 414 aa15.28■□□□□ 0.04
PUS1-209ENST00000543754 WWC3Q9ULE0 1092 aa15.28■□□□□ 0.04
PUS1-209ENST00000543754 PPM1GO15355 546 aaPredicted RBP15.26■□□□□ 0.03
PUS1-209ENST00000543754 GIGYF1O75420 1035 aaPredicted RBP15.26■□□□□ 0.03
PUS1-209ENST00000543754 PHF14O94880 888 aa15.26■□□□□ 0.03
PUS1-209ENST00000543754 POLKQ9UBT6 870 aa15.26■□□□□ 0.03
PUS1-209ENST00000543754 ASAP1Q9ULH1 1129 aa15.26■□□□□ 0.03
PUS1-209ENST00000543754 WASHC2AQ641Q2 1341 aa15.26■□□□□ 0.03
PUS1-209ENST00000543754 ATP10DQ9P241 1426 aa15.26■□□□□ 0.03
PUS1-209ENST00000543754 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.25■□□□□ 0.03
PUS1-209ENST00000543754 CD2APQ9Y5K6 639 aa15.25■□□□□ 0.03
PUS1-209ENST00000543754 ADCY9O60503 1353 aa15.25■□□□□ 0.03
PUS1-209ENST00000543754 LOC102724428A0A0B4J2F2 783 aa15.24■□□□□ 0.03
PUS1-209ENST00000543754 GRIN3BO60391 1043 aa15.24■□□□□ 0.03
PUS1-209ENST00000543754 SIK1P57059 783 aa15.24■□□□□ 0.03
PUS1-209ENST00000543754 SLC4A9Q96Q91 983 aa15.24■□□□□ 0.03
PUS1-209ENST00000543754 CEP350Q5VT06 3117 aa15.24■□□□□ 0.03
PUS1-209ENST00000543754 KIAA1551Q9HCM1 1747 aa15.24■□□□□ 0.03
PUS1-209ENST00000543754 CDCA8Q53HL2 280 aa15.24■□□□□ 0.03
PUS1-209ENST00000543754 SMARCC1Q92922 1105 aaPredicted RBP15.24■□□□□ 0.03
PUS1-209ENST00000543754 AK7Q96M32 723 aa15.24■□□□□ 0.03
PUS1-209ENST00000543754 PHKG2P15735 406 aa15.23■□□□□ 0.03
PUS1-209ENST00000543754 EIF4A2Q14240 407 aaKnown RBP15.23■□□□□ 0.03
PUS1-209ENST00000543754 FLAD1Q8NFF5 587 aa15.23■□□□□ 0.03
PUS1-209ENST00000543754 ATG3Q9NT62 314 aa15.23■□□□□ 0.03
PUS1-209ENST00000543754 IGSF1Q8N6C5 1336 aa15.22■□□□□ 0.03
PUS1-209ENST00000543754 KDRP35968 1356 aa15.21■□□□□ 0.03
PUS1-209ENST00000543754 SPG7Q9UQ90 795 aa15.21■□□□□ 0.02
PUS1-209ENST00000543754 SSFA2P28290 1259 aa15.2■□□□□ 0.02
PUS1-209ENST00000543754 TNNT2P45379 298 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms