RNA–Protein interactions for RNA: ENST00000543364.1

RAB35-205, Transcript of RAB35, member RAS oncogene family, humanhuman

TSL 3

Gene RAB35, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-205ENST00000543364 SBF2Q86WG5 1849 aa20.78■□□□□ 0.92
RAB35-205ENST00000543364 NPC1L1Q9UHC9 1359 aa20.77■□□□□ 0.92
RAB35-205ENST00000543364 CAMKK2Q96RR4 588 aa20.77■□□□□ 0.92
RAB35-205ENST00000543364 BCL11BQ9C0K0 894 aaPredicted RBP20.76■□□□□ 0.91
RAB35-205ENST00000543364 BCL9O00512 1426 aa20.76■□□□□ 0.91
RAB35-205ENST00000543364 NCAPD2Q15021 1401 aa20.74■□□□□ 0.91
RAB35-205ENST00000543364 KAT6BQ8WYB5 2073 aa20.73■□□□□ 0.91
RAB35-205ENST00000543364 IL13P35225 146 aa20.72■□□□□ 0.91
RAB35-205ENST00000543364 SHANK3Q9BYB0 1731 aa20.71■□□□□ 0.91
RAB35-205ENST00000543364 DDX10Q13206 875 aaKnown RBP20.71■□□□□ 0.91
RAB35-205ENST00000543364 IGSF1Q8N6C5 1336 aa20.71■□□□□ 0.91
RAB35-205ENST00000543364 CYP27B1O15528 508 aa20.7■□□□□ 0.9
RAB35-205ENST00000543364 AEBP1Q8IUX7 1158 aa20.7■□□□□ 0.9
RAB35-205ENST00000543364 PRIM1P49642 420 aaKnown RBP20.69■□□□□ 0.9
RAB35-205ENST00000543364 PLSCR1O15162 318 aa20.68■□□□□ 0.9
RAB35-205ENST00000543364 SULT6B1Q6IMI4 303 aa20.67■□□□□ 0.9
RAB35-205ENST00000543364 PROM2Q8N271 834 aa20.67■□□□□ 0.9
RAB35-205ENST00000543364 SYTL4Q96C24 671 aaPredicted RBP20.67■□□□□ 0.9
RAB35-205ENST00000543364 SPG7Q9UQ90 795 aa20.67■□□□□ 0.9
RAB35-205ENST00000543364 PCDH11XQ9BZA7 1347 aa20.67■□□□□ 0.9
RAB35-205ENST00000543364 PCDH11YQ9BZA8 1340 aa20.67■□□□□ 0.9
RAB35-205ENST00000543364 PSDA5PKW4 1024 aaPredicted RBP20.66■□□□□ 0.9
RAB35-205ENST00000543364 NHSQ6T4R5 1651 aa20.65■□□□□ 0.9
RAB35-205ENST00000543364 DIAPH1O60610 1272 aaKnown RBP20.65■□□□□ 0.9
RAB35-205ENST00000543364 PPP2R1AP30153 589 aa20.65■□□□□ 0.9
RAB35-205ENST00000543364 PARD3Q8TEW0 1356 aa20.64■□□□□ 0.89
RAB35-205ENST00000543364 HMOX1P09601 288 aa20.63■□□□□ 0.89
RAB35-205ENST00000543364 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.63■□□□□ 0.89
RAB35-205ENST00000543364 PKD1L3Q7Z443 1732 aa20.63■□□□□ 0.89
RAB35-205ENST00000543364 R3HDM1Q15032 1099 aaKnown RBP20.62■□□□□ 0.89
RAB35-205ENST00000543364 TXNRD1Q16881 649 aa20.62■□□□□ 0.89
RAB35-205ENST00000543364 PHKG2P15735 406 aa20.61■□□□□ 0.89
RAB35-205ENST00000543364 BTAF1O14981 1849 aa20.61■□□□□ 0.89
RAB35-205ENST00000543364 DOT1LQ8TEK3 1739 aa20.61■□□□□ 0.89
RAB35-205ENST00000543364 RREB1Q92766 1687 aa20.61■□□□□ 0.89
RAB35-205ENST00000543364 U2SURPO15042 1029 aaKnown RBP20.6■□□□□ 0.89
RAB35-205ENST00000543364 NKX1-1Q15270 411 aaPredicted RBP20.6■□□□□ 0.89
RAB35-205ENST00000543364 PLEKHO1Q53GL0 409 aaPredicted RBP20.6■□□□□ 0.89
RAB35-205ENST00000543364 IFNL2Q8IZJ0 200 aa20.6■□□□□ 0.89
RAB35-205ENST00000543364 COL3A1P02461 1466 aaPredicted RBP20.6■□□□□ 0.89
RAB35-205ENST00000543364 KDRP35968 1356 aa20.59■□□□□ 0.89
RAB35-205ENST00000543364 NUP188Q5SRE5 1749 aa20.58■□□□□ 0.89
RAB35-205ENST00000543364 NBPF14Q5TI25 921 aa20.58■□□□□ 0.89
RAB35-205ENST00000543364 ZNF530Q6P9A1 599 aaPredicted RBP20.58■□□□□ 0.89
RAB35-205ENST00000543364 MPRIPQ6WCQ1 1025 aa20.58■□□□□ 0.89
RAB35-205ENST00000543364 AMOTQ4VCS5 1084 aa20.57■□□□□ 0.88
RAB35-205ENST00000543364 CFAP53Q96M91 514 aa20.57■□□□□ 0.88
RAB35-205ENST00000543364 KCNQ4P56696 695 aa20.56■□□□□ 0.88
RAB35-205ENST00000543364 ANO8Q9HCE9 1232 aaPredicted RBP20.56■□□□□ 0.88
RAB35-205ENST00000543364 LRRC4BQ9NT99 713 aa20.56■□□□□ 0.88
RAB35-205ENST00000543364 RGPD3A6NKT7 1758 aaPredicted RBP20.56■□□□□ 0.88
RAB35-205ENST00000543364 RGPD4Q7Z3J3 1758 aa20.56■□□□□ 0.88
RAB35-205ENST00000543364 TOGARAM1Q9Y4F4 1720 aa20.55■□□□□ 0.88
RAB35-205ENST00000543364 PIGBQ92521 554 aa20.54■□□□□ 0.88
RAB35-205ENST00000543364 PLEKHG2Q9H7P9 1386 aa20.53■□□□□ 0.88
RAB35-205ENST00000543364 SRCAPQ6ZRS2 3230 aa20.52■□□□□ 0.88
RAB35-205ENST00000543364 ITGB4P16144 1822 aa20.51■□□□□ 0.87
RAB35-205ENST00000543364 MTHFSDQ2M296 383 aaKnown RBP20.51■□□□□ 0.87
RAB35-205ENST00000543364 C1orf141Q5JVX7 400 aa20.51■□□□□ 0.87
RAB35-205ENST00000543364 ZNF316A6NFI3 1004 aaPredicted RBP20.5■□□□□ 0.87
RAB35-205ENST00000543364 TMOD3Q9NYL9 352 aa20.5■□□□□ 0.87
RAB35-205ENST00000543364 NUDCQ9Y266 331 aa20.5■□□□□ 0.87
RAB35-205ENST00000543364 HSP90AB1P08238 724 aaKnown RBP20.49■□□□□ 0.87
RAB35-205ENST00000543364 U2AF1L5P0DN76 240 aaPredicted RBP20.49■□□□□ 0.87
RAB35-205ENST00000543364 U2AF1Q01081 240 aaKnown RBP eCLIP20.49■□□□□ 0.87
RAB35-205ENST00000543364 RALBP1Q15311 655 aa20.49■□□□□ 0.87
RAB35-205ENST00000543364 DCAF5Q96JK2 942 aa20.49■□□□□ 0.87
RAB35-205ENST00000543364 KDM6AO15550 1401 aaPredicted RBP20.48■□□□□ 0.87
RAB35-205ENST00000543364 SLC15A2Q16348 729 aa20.48■□□□□ 0.87
RAB35-205ENST00000543364 SLC27A3Q5K4L6 730 aa20.48■□□□□ 0.87
RAB35-205ENST00000543364 STK32BQ9NY57 414 aa20.48■□□□□ 0.87
RAB35-205ENST00000543364 ASAP1Q9ULH1 1129 aa20.48■□□□□ 0.87
RAB35-205ENST00000543364 ERVV-2B6SEH9 535 aa20.47■□□□□ 0.87
RAB35-205ENST00000543364 AKAP4Q5JQC9 854 aa20.47■□□□□ 0.87
RAB35-205ENST00000543364 PHACTR3Q96KR7 559 aa20.47■□□□□ 0.87
RAB35-205ENST00000543364 PDGFDQ9GZP0 370 aaPredicted RBP20.47■□□□□ 0.87
RAB35-205ENST00000543364 RSPH6AQ9H0K4 717 aa20.47■□□□□ 0.87
RAB35-205ENST00000543364 LGR6Q9HBX8 967 aa20.47■□□□□ 0.87
RAB35-205ENST00000543364 CCNL1Q9UK58 526 aaPredicted RBP20.47■□□□□ 0.87
RAB35-205ENST00000543364 PALLDQ8WX93 1383 aa20.46■□□□□ 0.87
RAB35-205ENST00000543364 PRKAR2BP31323 418 aa20.46■□□□□ 0.87
RAB35-205ENST00000543364 ZNF827Q17R98 1081 aa20.46■□□□□ 0.87
RAB35-205ENST00000543364 LY75O60449 1722 aa20.45■□□□□ 0.86
RAB35-205ENST00000543364 CABP4P57796 275 aa20.45■□□□□ 0.86
RAB35-205ENST00000543364 ATG3Q9NT62 314 aa20.45■□□□□ 0.86
RAB35-205ENST00000543364 NFATC2IPQ8NCF5 419 aa20.44■□□□□ 0.86
RAB35-205ENST00000543364 SMARCC1Q92922 1105 aaPredicted RBP20.44■□□□□ 0.86
RAB35-205ENST00000543364 AKT1S1Q96B36 256 aa20.43■□□□□ 0.86
RAB35-205ENST00000543364 PAPPAQ13219 1627 aa20.42■□□□□ 0.86
RAB35-205ENST00000543364 RNMTO43148 476 aaKnown RBP20.42■□□□□ 0.86
RAB35-205ENST00000543364 MYBBP1AQ9BQG0 1328 aaKnown RBP20.42■□□□□ 0.86
RAB35-205ENST00000543364 FCHSD2O94868 740 aa20.41■□□□□ 0.86
RAB35-205ENST00000543364 PRKRIP1Q9H875 184 aaPredicted RBP20.41■□□□□ 0.86
RAB35-205ENST00000543364 GAS2L2Q8NHY3 880 aa20.4■□□□□ 0.86
RAB35-205ENST00000543364 LOC102724428A0A0B4J2F2 783 aa20.39■□□□□ 0.85
RAB35-205ENST00000543364 SIK1P57059 783 aa20.39■□□□□ 0.85
RAB35-205ENST00000543364 ZBTB7AO95365 584 aa20.38■□□□□ 0.85
RAB35-205ENST00000543364 IL17REQ8NFR9 667 aa20.38■□□□□ 0.85
RAB35-205ENST00000543364 SLC4A9Q96Q91 983 aa20.38■□□□□ 0.85
RAB35-205ENST00000543364 RBM42Q9BTD8 480 aaKnown RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 153.1 ms