RNA–Protein interactions for RNA: ENST00000543042.5

CLPB-212, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-212ENST00000543042 ZNF428Q96B54 188 aa22.94■■□□□ 1.26
CLPB-212ENST00000543042 RTL1A6NKG5 1358 aa22.94■■□□□ 1.26
CLPB-212ENST00000543042 ARHGEF25Q86VW2 580 aa22.94■■□□□ 1.26
CLPB-212ENST00000543042 GAS2L2Q8NHY3 880 aa22.94■■□□□ 1.26
CLPB-212ENST00000543042 BRPF1P55201 1214 aaPredicted RBP22.93■■□□□ 1.26
CLPB-212ENST00000543042 MSH5O43196 834 aa22.93■■□□□ 1.26
CLPB-212ENST00000543042 AXIN2Q9Y2T1 843 aa22.93■■□□□ 1.26
CLPB-212ENST00000543042 BACH2Q9BYV9 841 aa22.92■■□□□ 1.26
CLPB-212ENST00000543042 LMTK3Q96Q04 1460 aa22.91■■□□□ 1.26
CLPB-212ENST00000543042 ZC3H6P61129 1189 aaKnown RBP22.91■■□□□ 1.26
CLPB-212ENST00000543042 DDX19BQ9UMR2 479 aa22.91■■□□□ 1.26
CLPB-212ENST00000543042 TRPM3Q9HCF6 1732 aaPredicted RBP22.91■■□□□ 1.26
CLPB-212ENST00000543042 IL17REQ8NFR9 667 aa22.9■■□□□ 1.26
CLPB-212ENST00000543042 GNAT3A8MTJ3 354 aa22.9■■□□□ 1.26
CLPB-212ENST00000543042 AAMPQ13685 434 aa22.9■■□□□ 1.26
CLPB-212ENST00000543042 TSPYL4Q9UJ04 414 aa22.9■■□□□ 1.26
CLPB-212ENST00000543042 USP19O94966 1318 aa22.89■■□□□ 1.25
CLPB-212ENST00000543042 MSH6P52701 1360 aa22.88■■□□□ 1.25
CLPB-212ENST00000543042 CADPS2Q86UW7 1296 aa22.88■■□□□ 1.25
CLPB-212ENST00000543042 CABLES1Q8TDN4 633 aa22.88■■□□□ 1.25
CLPB-212ENST00000543042 ZBTB40Q9NUA8 1239 aa22.88■■□□□ 1.25
CLPB-212ENST00000543042 SLIT3O75094 1523 aa22.87■■□□□ 1.25
CLPB-212ENST00000543042 RGPD2P0DJD1 1756 aa22.86■■□□□ 1.25
CLPB-212ENST00000543042 ZNF335Q9H4Z2 1342 aaPredicted RBP22.86■■□□□ 1.25
CLPB-212ENST00000543042 ANKRD24Q8TF21 1146 aa22.85■■□□□ 1.25
CLPB-212ENST00000543042 ARHGAP45Q92619 1136 aa22.85■■□□□ 1.25
CLPB-212ENST00000543042 RWDD1Q9H446 243 aaPredicted RBP22.85■■□□□ 1.25
CLPB-212ENST00000543042 STRCQ7RTU9 1775 aa22.85■■□□□ 1.25
CLPB-212ENST00000543042 KIF1AQ12756 1690 aa22.85■■□□□ 1.25
CLPB-212ENST00000543042 MAP3K5Q99683 1374 aa22.84■■□□□ 1.25
CLPB-212ENST00000543042 KIAA0232Q92628 1395 aa22.83■■□□□ 1.25
CLPB-212ENST00000543042 DCCP43146 1447 aa22.83■■□□□ 1.25
CLPB-212ENST00000543042 ZBTB7BO15156 539 aaPredicted RBP22.83■■□□□ 1.25
CLPB-212ENST00000543042 HTATSF1O43719 755 aaKnown RBP22.83■■□□□ 1.25
CLPB-212ENST00000543042 NPM2Q86SE8 214 aaKnown RBP22.83■■□□□ 1.25
CLPB-212ENST00000543042 LGR6Q9HBX8 967 aa22.83■■□□□ 1.25
CLPB-212ENST00000543042 PDZRN3Q9UPQ7 1066 aa22.83■■□□□ 1.25
CLPB-212ENST00000543042 NCOA3Q9Y6Q9 1424 aa22.83■■□□□ 1.24
CLPB-212ENST00000543042 C1orf115Q9H7X2 142 aa22.82■■□□□ 1.24
CLPB-212ENST00000543042 MED1Q15648 1581 aaPredicted RBP22.82■■□□□ 1.24
CLPB-212ENST00000543042 ABCC4O15439 1325 aa22.81■■□□□ 1.24
CLPB-212ENST00000543042 SLC4A2P04920 1241 aa22.8■■□□□ 1.24
CLPB-212ENST00000543042 C8orf34Q49A92 452 aa22.8■■□□□ 1.24
CLPB-212ENST00000543042 XIRP1Q702N8 1843 aaKnown RBP22.79■■□□□ 1.24
CLPB-212ENST00000543042 ALS2Q96Q42 1657 aa22.79■■□□□ 1.24
CLPB-212ENST00000543042 NPHP3Q7Z494 1330 aa22.79■■□□□ 1.24
CLPB-212ENST00000543042 PHRF1Q9P1Y6 1649 aaKnown RBP22.79■■□□□ 1.24
CLPB-212ENST00000543042 BRINP3Q76B58 766 aa22.79■■□□□ 1.24
CLPB-212ENST00000543042 G2E3Q7L622 706 aa22.78■■□□□ 1.24
CLPB-212ENST00000543042 NECTIN2Q92692 538 aa22.78■■□□□ 1.24
CLPB-212ENST00000543042 TAF7Q15545 349 aaPredicted RBP22.78■■□□□ 1.24
CLPB-212ENST00000543042 API5Q9BZZ5 524 aaKnown RBP22.78■■□□□ 1.24
CLPB-212ENST00000543042 HDAC1Q13547 482 aaPredicted RBP22.77■■□□□ 1.24
CLPB-212ENST00000543042 CHRNA2Q15822 529 aa22.77■■□□□ 1.24
CLPB-212ENST00000543042 ZNF530Q6P9A1 599 aaPredicted RBP22.76■■□□□ 1.23
CLPB-212ENST00000543042 MPRIPQ6WCQ1 1025 aa22.76■■□□□ 1.23
CLPB-212ENST00000543042 FAM161AQ3B820 660 aa22.76■■□□□ 1.23
CLPB-212ENST00000543042 RGPD5Q99666 1765 aa22.76■■□□□ 1.23
CLPB-212ENST00000543042 ERBB3P21860 1342 aa22.75■■□□□ 1.23
CLPB-212ENST00000543042 RGS12O14924 1447 aa22.75■■□□□ 1.23
CLPB-212ENST00000543042 LRRC37A3O60309 1634 aa22.74■■□□□ 1.23
CLPB-212ENST00000543042 SPATA31A3Q5VYP0 1347 aa22.74■■□□□ 1.23
CLPB-212ENST00000543042 PXDNQ92626 1479 aa22.74■■□□□ 1.23
CLPB-212ENST00000543042 HAP1P54257 671 aaPredicted RBP22.73■■□□□ 1.23
CLPB-212ENST00000543042 PLEKHO1Q53GL0 409 aaPredicted RBP22.73■■□□□ 1.23
CLPB-212ENST00000543042 SLAIN2Q9P270 581 aa22.73■■□□□ 1.23
CLPB-212ENST00000543042 ANP32AP39687 249 aaKnown RBP22.73■■□□□ 1.23
CLPB-212ENST00000543042 CEMIPQ8WUJ3 1361 aa22.73■■□□□ 1.23
CLPB-212ENST00000543042 TNS3Q68CZ2 1445 aa22.72■■□□□ 1.23
CLPB-212ENST00000543042 KCNQ3O43525 872 aa22.72■■□□□ 1.23
CLPB-212ENST00000543042 NLRP2Q9NX02 1062 aa22.72■■□□□ 1.23
CLPB-212ENST00000543042 F6X3S4 739 aa22.72■■□□□ 1.23
CLPB-212ENST00000543042 SIRT2Q8IXJ6 389 aa22.72■■□□□ 1.23
CLPB-212ENST00000543042 AKAP4Q5JQC9 854 aa22.71■■□□□ 1.23
CLPB-212ENST00000543042 INTS3Q68E01 1043 aaKnown RBP22.7■■□□□ 1.22
CLPB-212ENST00000543042 SMC5Q8IY18 1101 aa22.7■■□□□ 1.22
CLPB-212ENST00000543042 NCAPD2Q15021 1401 aa22.7■■□□□ 1.22
CLPB-212ENST00000543042 AMOTQ4VCS5 1084 aa22.69■■□□□ 1.22
CLPB-212ENST00000543042 PTPRCP08575 1304 aa22.68■■□□□ 1.22
CLPB-212ENST00000543042 RNMTO43148 476 aaKnown RBP22.67■■□□□ 1.22
CLPB-212ENST00000543042 C1orf141Q5JVX7 400 aa22.67■■□□□ 1.22
CLPB-212ENST00000543042 SLC4A10Q6U841 1118 aa22.67■■□□□ 1.22
CLPB-212ENST00000543042 IPO9Q96P70 1041 aaKnown RBP22.67■■□□□ 1.22
CLPB-212ENST00000543042 CSB-PGBD3P0DP91 1061 aa22.66■■□□□ 1.22
CLPB-212ENST00000543042 SEC24BO95487 1268 aa22.66■■□□□ 1.22
CLPB-212ENST00000543042 TEFQ10587 303 aa22.66■■□□□ 1.22
CLPB-212ENST00000543042 STK31Q9BXU1 1019 aa22.66■■□□□ 1.22
CLPB-212ENST00000543042 EIF4A1P60842 406 aaKnown RBP22.65■■□□□ 1.22
CLPB-212ENST00000543042 CCDC30Q5VVM6 783 aa22.65■■□□□ 1.22
CLPB-212ENST00000543042 BABAM1Q9NWV8 329 aa22.65■■□□□ 1.22
CLPB-212ENST00000543042 BTBD11A6QL63 1104 aa22.64■■□□□ 1.22
CLPB-212ENST00000543042 EIF2S2P20042 333 aaKnown RBP22.64■■□□□ 1.21
CLPB-212ENST00000543042 MEIS3Q99687 375 aa22.64■■□□□ 1.21
CLPB-212ENST00000543042 LNPKQ9C0E8 428 aa22.64■■□□□ 1.21
CLPB-212ENST00000543042 CHMP4BQ9H444 224 aaKnown RBP22.64■■□□□ 1.21
CLPB-212ENST00000543042 FLIIQ13045 1269 aa22.63■■□□□ 1.21
CLPB-212ENST00000543042 COL18A1P39060 1754 aa22.63■■□□□ 1.21
CLPB-212ENST00000543042 RAPGEF4Q8WZA2 1011 aa22.63■■□□□ 1.21
CLPB-212ENST00000543042 NUCB1Q02818 461 aa22.62■■□□□ 1.21
CLPB-212ENST00000543042 HDGFL1Q5TGJ6 251 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 235.3 ms