RNA–Protein interactions for RNA: ENST00000542946.1

TMEM138-209, Transcript of transmembrane protein 138, humanhuman

TSL 1 (best) BASIC

Gene TMEM138, Length 2,839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM138-209ENST00000542946 PLEKHG5O94827 1062 aa9.5□□□□□ -0.89
TMEM138-209ENST00000542946 EXOSC9Q06265 439 aaKnown RBP9.5□□□□□ -0.89
TMEM138-209ENST00000542946 ARHGAP45Q92619 1136 aa9.5□□□□□ -0.89
TMEM138-209ENST00000542946 KDRP35968 1356 aa9.5□□□□□ -0.89
TMEM138-209ENST00000542946 LRRC37A3O60309 1634 aa9.5□□□□□ -0.89
TMEM138-209ENST00000542946 ZNF853P0CG23 659 aa9.5□□□□□ -0.89
TMEM138-209ENST00000542946 SULT6B1Q6IMI4 303 aa9.5□□□□□ -0.89
TMEM138-209ENST00000542946 KCNH5Q8NCM2 988 aa9.5□□□□□ -0.89
TMEM138-209ENST00000542946 PHACTR3Q96KR7 559 aa9.5□□□□□ -0.89
TMEM138-209ENST00000542946 CACNA1FO60840 1977 aa9.5□□□□□ -0.89
TMEM138-209ENST00000542946 MST1RQ04912 1400 aa9.49□□□□□ -0.89
TMEM138-209ENST00000542946 ZBTB7CA1YPR0 619 aa9.49□□□□□ -0.89
TMEM138-209ENST00000542946 HTATSF1O43719 755 aaKnown RBP9.49□□□□□ -0.89
TMEM138-209ENST00000542946 MYT1Q01538 1121 aa9.49□□□□□ -0.89
TMEM138-209ENST00000542946 MVPQ14764 893 aaKnown RBP9.49□□□□□ -0.89
TMEM138-209ENST00000542946 DZIP1LQ8IYY4 767 aaKnown RBP9.49□□□□□ -0.89
TMEM138-209ENST00000542946 SMC4Q9NTJ3 1288 aa9.49□□□□□ -0.89
TMEM138-209ENST00000542946 DDX19BQ9UMR2 479 aa9.49□□□□□ -0.89
TMEM138-209ENST00000542946 TRPM3Q9HCF6 1732 aaPredicted RBP9.49□□□□□ -0.89
TMEM138-209ENST00000542946 FTSJ3Q8IY81 847 aaKnown RBP9.49□□□□□ -0.89
TMEM138-209ENST00000542946 FRAT1Q92837 279 aaPredicted RBP9.49□□□□□ -0.89
TMEM138-209ENST00000542946 ANP32AP39687 249 aaKnown RBP9.48□□□□□ -0.89
TMEM138-209ENST00000542946 HOMEZQ8IX15 550 aa9.48□□□□□ -0.89
TMEM138-209ENST00000542946 RWDD1Q9H446 243 aaPredicted RBP9.48□□□□□ -0.89
TMEM138-209ENST00000542946 KIAA0232Q92628 1395 aa9.48□□□□□ -0.89
TMEM138-209ENST00000542946 SLIT3O75094 1523 aa9.48□□□□□ -0.89
TMEM138-209ENST00000542946 NFAT5O94916 1531 aa9.48□□□□□ -0.89
TMEM138-209ENST00000542946 ATF7IPQ6VMQ6 1270 aa9.48□□□□□ -0.89
TMEM138-209ENST00000542946 AEBP1Q8IUX7 1158 aa9.48□□□□□ -0.89
TMEM138-209ENST00000542946 SOS1Q07889 1333 aaPredicted RBP9.48□□□□□ -0.89
TMEM138-209ENST00000542946 IGSF1Q8N6C5 1336 aa9.48□□□□□ -0.89
TMEM138-209ENST00000542946 HOXC9P31274 260 aa9.47□□□□□ -0.89
TMEM138-209ENST00000542946 TSR2Q969E8 191 aaKnown RBP9.47□□□□□ -0.89
TMEM138-209ENST00000542946 LTV1Q96GA3 475 aaPredicted RBP9.47□□□□□ -0.89
TMEM138-209ENST00000542946 GAS2L2Q8NHY3 880 aa9.47□□□□□ -0.89
TMEM138-209ENST00000542946 BACH2Q9BYV9 841 aa9.47□□□□□ -0.89
TMEM138-209ENST00000542946 NPHP3Q7Z494 1330 aa9.47□□□□□ -0.89
TMEM138-209ENST00000542946 GCP02774 474 aa9.46□□□□□ -0.89
TMEM138-209ENST00000542946 DDX17Q92841 729 aaKnown RBP9.46□□□□□ -0.89
TMEM138-209ENST00000542946 BABAM1Q9NWV8 329 aa9.46□□□□□ -0.89
TMEM138-209ENST00000542946 COG6Q9Y2V7 657 aa9.46□□□□□ -0.89
TMEM138-209ENST00000542946 ABCC6O95255 1503 aa9.46□□□□□ -0.89
TMEM138-209ENST00000542946 CAMTA1Q9Y6Y1 1673 aa9.46□□□□□ -0.89
TMEM138-209ENST00000542946 PDE4AP27815 886 aa9.46□□□□□ -0.9
TMEM138-209ENST00000542946 PANK1Q8TE04 598 aa9.46□□□□□ -0.9
TMEM138-209ENST00000542946 SSH1Q8WYL5 1049 aa9.46□□□□□ -0.9
TMEM138-209ENST00000542946 SLAIN2Q9P270 581 aa9.46□□□□□ -0.9
TMEM138-209ENST00000542946 IP6K1Q92551 441 aa9.46□□□□□ -0.9
TMEM138-209ENST00000542946 ALS2Q96Q42 1657 aa9.45□□□□□ -0.9
TMEM138-209ENST00000542946 FAM208AQ9UK61 1670 aaKnown RBP9.45□□□□□ -0.9
TMEM138-209ENST00000542946 EYA1Q99502 592 aa9.45□□□□□ -0.9
TMEM138-209ENST00000542946 N4BP2Q86UW6 1770 aaPredicted RBP9.45□□□□□ -0.9
TMEM138-209ENST00000542946 LAS1LQ9Y4W2 734 aaKnown RBP9.45□□□□□ -0.9
TMEM138-209ENST00000542946 PLEKHG2Q9H7P9 1386 aa9.45□□□□□ -0.9
TMEM138-209ENST00000542946 LMO7Q8WWI1 1683 aa9.44□□□□□ -0.9
TMEM138-209ENST00000542946 VAMP4O75379 141 aa9.44□□□□□ -0.9
TMEM138-209ENST00000542946 HDAC1Q13547 482 aaPredicted RBP9.44□□□□□ -0.9
TMEM138-209ENST00000542946 API5Q9BZZ5 524 aaKnown RBP9.44□□□□□ -0.9
TMEM138-209ENST00000542946 MBIPQ9NS73 344 aa9.44□□□□□ -0.9
TMEM138-209ENST00000542946 TRIM27P14373 513 aa9.44□□□□□ -0.9
TMEM138-209ENST00000542946 FAM161AQ3B820 660 aa9.44□□□□□ -0.9
TMEM138-209ENST00000542946 BRINP3Q76B58 766 aa9.44□□□□□ -0.9
TMEM138-209ENST00000542946 RTF1Q92541 710 aaKnown RBP9.43□□□□□ -0.9
TMEM138-209ENST00000542946 THUMPD2Q9BTF0 503 aaKnown RBP9.43□□□□□ -0.9
TMEM138-209ENST00000542946 CHMP4AQ9BY43 222 aa9.43□□□□□ -0.9
TMEM138-209ENST00000542946 NOB1Q9ULX3 412 aaKnown RBP9.43□□□□□ -0.9
TMEM138-209ENST00000542946 CRB1P82279 1406 aa9.43□□□□□ -0.9
TMEM138-209ENST00000542946 USP19O94966 1318 aa9.43□□□□□ -0.9
TMEM138-209ENST00000542946 CHL1O00533 1208 aa9.43□□□□□ -0.9
TMEM138-209ENST00000542946 TWISTNBQ3B726 338 aaPredicted RBP9.43□□□□□ -0.9
TMEM138-209ENST00000542946 ARHGEF25Q86VW2 580 aa9.43□□□□□ -0.9
TMEM138-209ENST00000542946 MRPL50Q8N5N7 158 aaKnown RBP9.43□□□□□ -0.9
TMEM138-209ENST00000542946 RLBP1P12271 317 aa9.42□□□□□ -0.9
TMEM138-209ENST00000542946 POLA2Q14181 598 aa9.42□□□□□ -0.9
TMEM138-209ENST00000542946 DDRGK1Q96HY6 314 aa9.42□□□□□ -0.9
TMEM138-209ENST00000542946 ZC3H6P61129 1189 aaKnown RBP9.42□□□□□ -0.9
TMEM138-209ENST00000542946 OVOS2A0A0G2JMS6 1433 aa9.42□□□□□ -0.9
TMEM138-209ENST00000542946 NCAPD2Q15021 1401 aa9.42□□□□□ -0.9
TMEM138-209ENST00000542946 XIRP1Q702N8 1843 aaKnown RBP9.42□□□□□ -0.9
TMEM138-209ENST00000542946 ERICH6Q7L0X2 663 aa9.41□□□□□ -0.9
TMEM138-209ENST00000542946 IPO9Q96P70 1041 aaKnown RBP9.41□□□□□ -0.9
TMEM138-209ENST00000542946 BCL2L13Q9BXK5 485 aa9.41□□□□□ -0.9
TMEM138-209ENST00000542946 ABCC4O15439 1325 aa9.41□□□□□ -0.9
TMEM138-209ENST00000542946 PTPRCP08575 1304 aa9.41□□□□□ -0.9
TMEM138-209ENST00000542946 FAM83GA6ND36 823 aa9.41□□□□□ -0.9
TMEM138-209ENST00000542946 ITPRIPQ8IWB1 547 aa9.41□□□□□ -0.9
TMEM138-209ENST00000542946 CIZ1Q9ULV3 898 aaPredicted RBP9.41□□□□□ -0.9
TMEM138-209ENST00000542946 SPATA31A3Q5VYP0 1347 aa9.41□□□□□ -0.9
TMEM138-209ENST00000542946 IGHDP01880 384 aa9.41□□□□□ -0.9
TMEM138-209ENST00000542946 DCTN1Q14203 1278 aa9.41□□□□□ -0.9
TMEM138-209ENST00000542946 MTHFSDQ2M296 383 aaKnown RBP9.41□□□□□ -0.9
TMEM138-209ENST00000542946 USHBP1Q8N6Y0 703 aa9.41□□□□□ -0.9
TMEM138-209ENST00000542946 CABLES1Q8TDN4 633 aa9.41□□□□□ -0.9
TMEM138-209ENST00000542946 TNS3Q68CZ2 1445 aa9.4□□□□□ -0.9
TMEM138-209ENST00000542946 MAP3K5Q99683 1374 aa9.4□□□□□ -0.9
TMEM138-209ENST00000542946 KDM3BQ7LBC6 1761 aa9.4□□□□□ -0.9
TMEM138-209ENST00000542946 MED1Q15648 1581 aaPredicted RBP9.4□□□□□ -0.91
TMEM138-209ENST00000542946 NBPF6Q5VWK0 638 aa9.4□□□□□ -0.91
TMEM138-209ENST00000542946 NBPF4Q96M43 638 aa9.4□□□□□ -0.91
TMEM138-209ENST00000542946 ZBTB40Q9NUA8 1239 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms