RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 MEGF6O75095 1541 aa19.45■□□□□ 0.7
LTBR-209ENST00000541102 MAP2P11137 1827 aaKnown RBP19.44■□□□□ 0.7
LTBR-209ENST00000541102 RREB1Q92766 1687 aa19.43■□□□□ 0.7
LTBR-209ENST00000541102 TXNRD1Q16881 649 aa19.43■□□□□ 0.7
LTBR-209ENST00000541102 SYTL4Q96C24 671 aaPredicted RBP19.43■□□□□ 0.7
LTBR-209ENST00000541102 NSD2O96028 1365 aa19.42■□□□□ 0.7
LTBR-209ENST00000541102 NUP188Q5SRE5 1749 aa19.42■□□□□ 0.7
LTBR-209ENST00000541102 PRIM1P49642 420 aaKnown RBP19.41■□□□□ 0.7
LTBR-209ENST00000541102 EYA1Q99502 592 aa19.41■□□□□ 0.7
LTBR-209ENST00000541102 PER1O15534 1290 aaPredicted RBP19.4■□□□□ 0.7
LTBR-209ENST00000541102 NHSQ6T4R5 1651 aa19.4■□□□□ 0.7
LTBR-209ENST00000541102 EIF4A2Q14240 407 aaKnown RBP19.39■□□□□ 0.69
LTBR-209ENST00000541102 ANO8Q9HCE9 1232 aaPredicted RBP19.39■□□□□ 0.69
LTBR-209ENST00000541102 ANKRD26Q9UPS8 1709 aa19.39■□□□□ 0.69
LTBR-209ENST00000541102 CNGB1Q14028 1251 aaPredicted RBP19.37■□□□□ 0.69
LTBR-209ENST00000541102 AMER1Q5JTC6 1135 aaPredicted RBP19.37■□□□□ 0.69
LTBR-209ENST00000541102 RGPD3A6NKT7 1758 aaPredicted RBP19.37■□□□□ 0.69
LTBR-209ENST00000541102 RGPD4Q7Z3J3 1758 aa19.37■□□□□ 0.69
LTBR-209ENST00000541102 PCDH11XQ9BZA7 1347 aa19.36■□□□□ 0.69
LTBR-209ENST00000541102 PCDH11YQ9BZA8 1340 aa19.36■□□□□ 0.69
LTBR-209ENST00000541102 ZNF316A6NFI3 1004 aaPredicted RBP19.36■□□□□ 0.69
LTBR-209ENST00000541102 STK32BQ9NY57 414 aa19.36■□□□□ 0.69
LTBR-209ENST00000541102 SRCAPQ6ZRS2 3230 aa19.35■□□□□ 0.69
LTBR-209ENST00000541102 DDX10Q13206 875 aaKnown RBP19.35■□□□□ 0.69
LTBR-209ENST00000541102 BTAF1O14981 1849 aa19.35■□□□□ 0.69
LTBR-209ENST00000541102 CYP27B1O15528 508 aa19.34■□□□□ 0.69
LTBR-209ENST00000541102 CC2D1BQ5T0F9 858 aaKnown RBP19.34■□□□□ 0.69
LTBR-209ENST00000541102 SPG7Q9UQ90 795 aa19.34■□□□□ 0.69
LTBR-209ENST00000541102 SHANK3Q9BYB0 1731 aa19.34■□□□□ 0.69
LTBR-209ENST00000541102 SLC15A2Q16348 729 aa19.32■□□□□ 0.68
LTBR-209ENST00000541102 KCNQ4P56696 695 aa19.31■□□□□ 0.68
LTBR-209ENST00000541102 PDGFDQ9GZP0 370 aaPredicted RBP19.31■□□□□ 0.68
LTBR-209ENST00000541102 LRRC4BQ9NT99 713 aa19.31■□□□□ 0.68
LTBR-209ENST00000541102 NCAPD2Q15021 1401 aa19.31■□□□□ 0.68
LTBR-209ENST00000541102 LRP5O75197 1615 aa19.3■□□□□ 0.68
LTBR-209ENST00000541102 MPRIPQ6WCQ1 1025 aa19.3■□□□□ 0.68
LTBR-209ENST00000541102 DOT1LQ8TEK3 1739 aa19.3■□□□□ 0.68
LTBR-209ENST00000541102 SPON1Q9HCB6 807 aa19.29■□□□□ 0.68
LTBR-209ENST00000541102 IGSF1Q8N6C5 1336 aa19.28■□□□□ 0.68
LTBR-209ENST00000541102 MTHFSP49914 203 aa19.28■□□□□ 0.68
LTBR-209ENST00000541102 SLC27A3Q5K4L6 730 aa19.28■□□□□ 0.68
LTBR-209ENST00000541102 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.28■□□□□ 0.68
LTBR-209ENST00000541102 ZBTB7AO95365 584 aa19.27■□□□□ 0.68
LTBR-209ENST00000541102 AEBP1Q8IUX7 1158 aa19.27■□□□□ 0.68
LTBR-209ENST00000541102 ZNF827Q17R98 1081 aa19.26■□□□□ 0.67
LTBR-209ENST00000541102 IFNL2Q8IZJ0 200 aa19.26■□□□□ 0.67
LTBR-209ENST00000541102 CCNL1Q9UK58 526 aaPredicted RBP19.26■□□□□ 0.67
LTBR-209ENST00000541102 PHKG2P15735 406 aa19.25■□□□□ 0.67
LTBR-209ENST00000541102 IL13P35225 146 aa19.25■□□□□ 0.67
LTBR-209ENST00000541102 NKX1-1Q15270 411 aaPredicted RBP19.25■□□□□ 0.67
LTBR-209ENST00000541102 PLEKHO1Q53GL0 409 aaPredicted RBP19.25■□□□□ 0.67
LTBR-209ENST00000541102 SULT6B1Q6IMI4 303 aa19.25■□□□□ 0.67
LTBR-209ENST00000541102 PPP1R1BQ9UD71 204 aaPredicted RBP19.25■□□□□ 0.67
LTBR-209ENST00000541102 ATF5Q9Y2D1 282 aaPredicted RBP19.25■□□□□ 0.67
LTBR-209ENST00000541102 PKD1L3Q7Z443 1732 aa19.25■□□□□ 0.67
LTBR-209ENST00000541102 PIGBQ92521 554 aa19.23■□□□□ 0.67
LTBR-209ENST00000541102 NPC1L1Q9UHC9 1359 aa19.22■□□□□ 0.67
LTBR-209ENST00000541102 AKT1S1Q96B36 256 aa19.22■□□□□ 0.67
LTBR-209ENST00000541102 ZNF530Q6P9A1 599 aaPredicted RBP19.21■□□□□ 0.67
LTBR-209ENST00000541102 TMOD3Q9NYL9 352 aa19.21■□□□□ 0.67
LTBR-209ENST00000541102 TFCP2L1Q9NZI6 479 aa19.21■□□□□ 0.67
LTBR-209ENST00000541102 PALLDQ8WX93 1383 aa19.2■□□□□ 0.66
LTBR-209ENST00000541102 AMOTQ4VCS5 1084 aa19.2■□□□□ 0.66
LTBR-209ENST00000541102 SMARCC1Q92922 1105 aaPredicted RBP19.2■□□□□ 0.66
LTBR-209ENST00000541102 CASZ1Q86V15 1759 aa19.19■□□□□ 0.66
LTBR-209ENST00000541102 PAPPAQ13219 1627 aa19.19■□□□□ 0.66
LTBR-209ENST00000541102 DIAPH1O60610 1272 aaKnown RBP19.19■□□□□ 0.66
LTBR-209ENST00000541102 HMOX1P09601 288 aa19.19■□□□□ 0.66
LTBR-209ENST00000541102 LY75O60449 1722 aa19.18■□□□□ 0.66
LTBR-209ENST00000541102 TOGARAM1Q9Y4F4 1720 aa19.18■□□□□ 0.66
LTBR-209ENST00000541102 MTFR1LQ9H019 292 aa19.18■□□□□ 0.66
LTBR-209ENST00000541102 ITGB4P16144 1822 aa19.17■□□□□ 0.66
LTBR-209ENST00000541102 HSP90AB1P08238 724 aaKnown RBP19.17■□□□□ 0.66
LTBR-209ENST00000541102 C1orf141Q5JVX7 400 aa19.17■□□□□ 0.66
LTBR-209ENST00000541102 MSH5O43196 834 aa19.16■□□□□ 0.66
LTBR-209ENST00000541102 PTGER2P43116 358 aa19.16■□□□□ 0.66
LTBR-209ENST00000541102 DCAF5Q96JK2 942 aa19.16■□□□□ 0.66
LTBR-209ENST00000541102 ASAP1Q9ULH1 1129 aa19.16■□□□□ 0.66
LTBR-209ENST00000541102 PNPLA7Q6ZV29 1317 aa19.16■□□□□ 0.66
LTBR-209ENST00000541102 PLEKHG2Q9H7P9 1386 aa19.16■□□□□ 0.66
LTBR-209ENST00000541102 ERVV-2B6SEH9 535 aa19.15■□□□□ 0.66
LTBR-209ENST00000541102 KDRP35968 1356 aa19.15■□□□□ 0.66
LTBR-209ENST00000541102 U2SURPO15042 1029 aaKnown RBP19.14■□□□□ 0.65
LTBR-209ENST00000541102 CABP4P57796 275 aa19.14■□□□□ 0.65
LTBR-209ENST00000541102 ATG3Q9NT62 314 aa19.13■□□□□ 0.65
LTBR-209ENST00000541102 LOC102724428A0A0B4J2F2 783 aa19.12■□□□□ 0.65
LTBR-209ENST00000541102 SIK1P57059 783 aa19.12■□□□□ 0.65
LTBR-209ENST00000541102 SLC16A10Q8TF71 515 aa19.12■□□□□ 0.65
LTBR-209ENST00000541102 HMGB2P26583 209 aaKnown RBP19.11■□□□□ 0.65
LTBR-209ENST00000541102 ATP6V1AP38606 617 aa19.11■□□□□ 0.65
LTBR-209ENST00000541102 COL23A1Q86Y22 540 aaPredicted RBP19.11■□□□□ 0.65
LTBR-209ENST00000541102 CFAP53Q96M91 514 aa19.11■□□□□ 0.65
LTBR-209ENST00000541102 KDM6AO15550 1401 aaPredicted RBP19.1■□□□□ 0.65
LTBR-209ENST00000541102 PPP2R1AP30153 589 aa19.1■□□□□ 0.65
LTBR-209ENST00000541102 SGIP1Q9BQI5 828 aa19.1■□□□□ 0.65
LTBR-209ENST00000541102 RBM42Q9BTD8 480 aaKnown RBP19.1■□□□□ 0.65
LTBR-209ENST00000541102 ITPK1Q13572 414 aa19.09■□□□□ 0.65
LTBR-209ENST00000541102 AKAP4Q5JQC9 854 aa19.09■□□□□ 0.65
LTBR-209ENST00000541102 NFATC2IPQ8NCF5 419 aa19.09■□□□□ 0.65
LTBR-209ENST00000541102 AK7Q96M32 723 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms