RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 USP19O94966 1318 aa12.11□□□□□ -0.47
LCOR-209ENST00000540664 ELL2O00472 640 aaPredicted RBP12.11□□□□□ -0.47
LCOR-209ENST00000540664 ABTB2Q8N961 1025 aa12.11□□□□□ -0.47
LCOR-209ENST00000540664 HTATSF1O43719 755 aaKnown RBP12.11□□□□□ -0.47
LCOR-209ENST00000540664 PIAS4Q8N2W9 510 aaPredicted RBP12.11□□□□□ -0.47
LCOR-209ENST00000540664 API5Q9BZZ5 524 aaKnown RBP12.11□□□□□ -0.47
LCOR-209ENST00000540664 RGS12O14924 1447 aa12.11□□□□□ -0.47
LCOR-209ENST00000540664 GAS2L2Q8NHY3 880 aa12.1□□□□□ -0.47
LCOR-209ENST00000540664 FOXO3O43524 673 aa12.09□□□□□ -0.47
LCOR-209ENST00000540664 NUTM2GQ5VZR2 741 aa12.09□□□□□ -0.47
LCOR-209ENST00000540664 C14orf37Q86TY3 774 aa12.09□□□□□ -0.47
LCOR-209ENST00000540664 SLIT3O75094 1523 aa12.08□□□□□ -0.48
LCOR-209ENST00000540664 NUCB1Q02818 461 aa12.08□□□□□ -0.48
LCOR-209ENST00000540664 TRPM3Q9HCF6 1732 aaPredicted RBP12.08□□□□□ -0.48
LCOR-209ENST00000540664 SEC24BO95487 1268 aa12.07□□□□□ -0.48
LCOR-209ENST00000540664 KRT24Q2M2I5 525 aa12.07□□□□□ -0.48
LCOR-209ENST00000540664 INTS3Q68E01 1043 aaKnown RBP12.07□□□□□ -0.48
LCOR-209ENST00000540664 IP6K1Q92551 441 aa12.07□□□□□ -0.48
LCOR-209ENST00000540664 STRCP1A6NGW2 1772 aa12.07□□□□□ -0.48
LCOR-209ENST00000540664 PROSER2Q86WR7 435 aaPredicted RBP12.07□□□□□ -0.48
LCOR-209ENST00000540664 RTF1Q92541 710 aaKnown RBP12.07□□□□□ -0.48
LCOR-209ENST00000540664 PTPRCP08575 1304 aa12.06□□□□□ -0.48
LCOR-209ENST00000540664 MST1RQ04912 1400 aa12.06□□□□□ -0.48
LCOR-209ENST00000540664 CACNB1Q02641 598 aaPredicted RBP12.06□□□□□ -0.48
LCOR-209ENST00000540664 ESCO1Q5FWF5 840 aa12.06□□□□□ -0.48
LCOR-209ENST00000540664 MSH6P52701 1360 aa12.06□□□□□ -0.48
LCOR-209ENST00000540664 KIF1AQ12756 1690 aa12.06□□□□□ -0.48
LCOR-209ENST00000540664 GCC1Q96CN9 775 aa12.06□□□□□ -0.48
LCOR-209ENST00000540664 MAP3K5Q99683 1374 aa12.05□□□□□ -0.48
LCOR-209ENST00000540664 PSME1Q06323 249 aa12.05□□□□□ -0.48
LCOR-209ENST00000540664 SIRT2Q8IXJ6 389 aa12.05□□□□□ -0.48
LCOR-209ENST00000540664 KCNH5Q8NCM2 988 aa12.05□□□□□ -0.48
LCOR-209ENST00000540664 BABAM1Q9NWV8 329 aa12.05□□□□□ -0.48
LCOR-209ENST00000540664 NCAPD2Q15021 1401 aa12.05□□□□□ -0.48
LCOR-209ENST00000540664 MED1Q15648 1581 aaPredicted RBP12.05□□□□□ -0.48
LCOR-209ENST00000540664 GNAT3A8MTJ3 354 aa12.05□□□□□ -0.48
LCOR-209ENST00000540664 FAM208AQ9UK61 1670 aaKnown RBP12.04□□□□□ -0.48
LCOR-209ENST00000540664 TSPYL4Q9UJ04 414 aa12.04□□□□□ -0.48
LCOR-209ENST00000540664 SOS1Q07889 1333 aaPredicted RBP12.04□□□□□ -0.48
LCOR-209ENST00000540664 CAMTA1Q9Y6Y1 1673 aa12.03□□□□□ -0.48
LCOR-209ENST00000540664 CHD1LQ86WJ1 897 aa12.03□□□□□ -0.48
LCOR-209ENST00000540664 ATP10DQ9P241 1426 aa12.03□□□□□ -0.48
LCOR-209ENST00000540664 ORAI2Q96SN7 254 aa12.03□□□□□ -0.48
LCOR-209ENST00000540664 MIS18AQ9NYP9 233 aa12.03□□□□□ -0.48
LCOR-209ENST00000540664 C1orf167Q5SNV9 1468 aa12.03□□□□□ -0.48
LCOR-209ENST00000540664 HSPA2P54652 639 aa12.02□□□□□ -0.48
LCOR-209ENST00000540664 IL17REQ8NFR9 667 aa12.02□□□□□ -0.48
LCOR-209ENST00000540664 TBC1D32Q96NH3 1257 aa12.02□□□□□ -0.48
LCOR-209ENST00000540664 C1orf115Q9H7X2 142 aa12.02□□□□□ -0.48
LCOR-209ENST00000540664 LMO7Q8WWI1 1683 aa12.02□□□□□ -0.49
LCOR-209ENST00000540664 CEMIPQ8WUJ3 1361 aa12.02□□□□□ -0.49
LCOR-209ENST00000540664 RGPD2P0DJD1 1756 aa12.02□□□□□ -0.49
LCOR-209ENST00000540664 ALS2Q96Q42 1657 aa12.01□□□□□ -0.49
LCOR-209ENST00000540664 N4BP2Q86UW6 1770 aaPredicted RBP12.01□□□□□ -0.49
LCOR-209ENST00000540664 NBPF6Q5VWK0 638 aa12.01□□□□□ -0.49
LCOR-209ENST00000540664 ARHGEF25Q86VW2 580 aa12.01□□□□□ -0.49
LCOR-209ENST00000540664 NBPF4Q96M43 638 aa12.01□□□□□ -0.49
LCOR-209ENST00000540664 C19orf44Q9H6X5 657 aa12.01□□□□□ -0.49
LCOR-209ENST00000540664 TMEM94Q12767 1356 aa12.01□□□□□ -0.49
LCOR-209ENST00000540664 CACNA1FO60840 1977 aa12.01□□□□□ -0.49
LCOR-209ENST00000540664 NCOA3Q9Y6Q9 1424 aa12.01□□□□□ -0.49
LCOR-209ENST00000540664 KDM4FA0A1W2PPD8 638 aa12.01□□□□□ -0.49
LCOR-209ENST00000540664 SLC4A2P04920 1241 aa12.01□□□□□ -0.49
LCOR-209ENST00000540664 LTV1Q96GA3 475 aaPredicted RBP12.01□□□□□ -0.49
LCOR-209ENST00000540664 LMTK3Q96Q04 1460 aa12□□□□□ -0.49
LCOR-209ENST00000540664 GCP02774 474 aa12□□□□□ -0.49
LCOR-209ENST00000540664 LNPKQ9C0E8 428 aa12□□□□□ -0.49
LCOR-209ENST00000540664 KDM3BQ7LBC6 1761 aa12□□□□□ -0.49
LCOR-209ENST00000540664 DCCP43146 1447 aa12□□□□□ -0.49
LCOR-209ENST00000540664 STRCQ7RTU9 1775 aa11.99□□□□□ -0.49
LCOR-209ENST00000540664 TAF7Q15545 349 aaPredicted RBP11.99□□□□□ -0.49
LCOR-209ENST00000540664 ANKRD44Q8N8A2 993 aa11.99□□□□□ -0.49
LCOR-209ENST00000540664 DCTPP1Q9H773 170 aa11.99□□□□□ -0.49
LCOR-209ENST00000540664 RPAP2Q8IXW5 612 aaPredicted RBP11.99□□□□□ -0.49
LCOR-209ENST00000540664 USHBP1Q8N6Y0 703 aa11.99□□□□□ -0.49
LCOR-209ENST00000540664 UPF2Q9HAU5 1272 aaKnown RBP11.99□□□□□ -0.49
LCOR-209ENST00000540664 SLC4A3P48751 1232 aa11.98□□□□□ -0.49
LCOR-209ENST00000540664 XPCQ01831 940 aaPredicted RBP11.98□□□□□ -0.49
LCOR-209ENST00000540664 BMP2KLQ5H9B9 411 aa11.98□□□□□ -0.49
LCOR-209ENST00000540664 G2E3Q7L622 706 aa11.98□□□□□ -0.49
LCOR-209ENST00000540664 NBR1Q14596 966 aa11.98□□□□□ -0.49
LCOR-209ENST00000540664 ANKRD45Q5TZF3 282 aa11.98□□□□□ -0.49
LCOR-209ENST00000540664 XIRP1Q702N8 1843 aaKnown RBP11.97□□□□□ -0.49
LCOR-209ENST00000540664 OVOS2A0A0G2JMS6 1433 aa11.97□□□□□ -0.49
LCOR-209ENST00000540664 ATF3P18847 181 aa11.97□□□□□ -0.49
LCOR-209ENST00000540664 CCDC30Q5VVM6 783 aa11.97□□□□□ -0.49
LCOR-209ENST00000540664 CEP85Q6P2H3 762 aa11.97□□□□□ -0.49
LCOR-209ENST00000540664 KRT28Q7Z3Y7 464 aa11.97□□□□□ -0.49
LCOR-209ENST00000540664 CCT4P50991 539 aaKnown RBP11.96□□□□□ -0.49
LCOR-209ENST00000540664 USP35Q9P2H5 1018 aa11.96□□□□□ -0.49
LCOR-209ENST00000540664 DAXXQ9UER7 740 aaPredicted RBP11.96□□□□□ -0.49
LCOR-209ENST00000540664 ADAMTS7Q9UKP4 1686 aa11.96□□□□□ -0.49
LCOR-209ENST00000540664 PXDNLA1KZ92 1463 aa11.96□□□□□ -0.49
LCOR-209ENST00000540664 MEIS3Q99687 375 aa11.96□□□□□ -0.49
LCOR-209ENST00000540664 STK31Q9BXU1 1019 aa11.96□□□□□ -0.49
LCOR-209ENST00000540664 AMOTQ4VCS5 1084 aa11.95□□□□□ -0.5
LCOR-209ENST00000540664 AKAP4Q5JQC9 854 aa11.95□□□□□ -0.5
LCOR-209ENST00000540664 LRRC59Q96AG4 307 aaKnown RBP11.95□□□□□ -0.5
LCOR-209ENST00000540664 HOXB7P09629 217 aa11.94□□□□□ -0.5
LCOR-209ENST00000540664 FLIIQ13045 1269 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms