RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 CHD1LQ86WJ1 897 aa14.51□□□□□ -0.09
C11orf54-214ENST00000540113 CHD2O14647 1828 aaKnown RBP14.5□□□□□ -0.09
C11orf54-214ENST00000540113 SIRT2Q8IXJ6 389 aa14.5□□□□□ -0.09
C11orf54-214ENST00000540113 USP54Q70EL1 1684 aa14.5□□□□□ -0.09
C11orf54-214ENST00000540113 ARHGEF10O15013 1369 aa14.5□□□□□ -0.09
C11orf54-214ENST00000540113 MIS18AQ9NYP9 233 aa14.5□□□□□ -0.09
C11orf54-214ENST00000540113 SBNO1A3KN83 1393 aa14.49□□□□□ -0.09
C11orf54-214ENST00000540113 ARHGAP45Q92619 1136 aa14.49□□□□□ -0.09
C11orf54-214ENST00000540113 FLT4P35916 1363 aa14.49□□□□□ -0.09
C11orf54-214ENST00000540113 ABCC4O15439 1325 aa14.48□□□□□ -0.09
C11orf54-214ENST00000540113 FOXO3O43524 673 aa14.48□□□□□ -0.09
C11orf54-214ENST00000540113 ANTXR1Q9H6X2 564 aa14.47□□□□□ -0.09
C11orf54-214ENST00000540113 CRB1P82279 1406 aa14.47□□□□□ -0.09
C11orf54-214ENST00000540113 KDRP35968 1356 aa14.47□□□□□ -0.09
C11orf54-214ENST00000540113 SETD1BQ9UPS6 1966 aaKnown RBP14.46□□□□□ -0.09
C11orf54-214ENST00000540113 CHL1O00533 1208 aa14.46□□□□□ -0.09
C11orf54-214ENST00000540113 NUTM2GQ5VZR2 741 aa14.46□□□□□ -0.09
C11orf54-214ENST00000540113 BRPF3Q9ULD4 1205 aa14.46□□□□□ -0.09
C11orf54-214ENST00000540113 NWD1Q149M9 1564 aa14.45□□□□□ -0.1
C11orf54-214ENST00000540113 IGSF1Q8N6C5 1336 aa14.45□□□□□ -0.1
C11orf54-214ENST00000540113 NLRP6P59044 892 aa14.44□□□□□ -0.1
C11orf54-214ENST00000540113 MTHFSDQ2M296 383 aaKnown RBP14.44□□□□□ -0.1
C11orf54-214ENST00000540113 EYA1Q99502 592 aa14.44□□□□□ -0.1
C11orf54-214ENST00000540113 RGS12O14924 1447 aa14.44□□□□□ -0.1
C11orf54-214ENST00000540113 AMPHP49418 695 aa14.43□□□□□ -0.1
C11orf54-214ENST00000540113 RBM33Q96EV2 1170 aaKnown RBP14.43□□□□□ -0.1
C11orf54-214ENST00000540113 API5Q9BZZ5 524 aaKnown RBP14.43□□□□□ -0.1
C11orf54-214ENST00000540113 LRRC37A3O60309 1634 aa14.43□□□□□ -0.1
C11orf54-214ENST00000540113 KIAA0232Q92628 1395 aa14.43□□□□□ -0.1
C11orf54-214ENST00000540113 APBB1O00213 710 aa14.42□□□□□ -0.1
C11orf54-214ENST00000540113 GCC1Q96CN9 775 aa14.42□□□□□ -0.1
C11orf54-214ENST00000540113 C16orf71Q8IYS4 520 aaPredicted RBP14.42□□□□□ -0.1
C11orf54-214ENST00000540113 NPHP4O75161 1426 aaPredicted RBP14.41□□□□□ -0.1
C11orf54-214ENST00000540113 LTN1O94822 1766 aa14.41□□□□□ -0.1
C11orf54-214ENST00000540113 HOXC9P31274 260 aa14.41□□□□□ -0.1
C11orf54-214ENST00000540113 BMP2KLQ5H9B9 411 aa14.4□□□□□ -0.1
C11orf54-214ENST00000540113 ABTB2Q8N961 1025 aa14.4□□□□□ -0.1
C11orf54-214ENST00000540113 PHF8Q9UPP1 1060 aa14.4□□□□□ -0.1
C11orf54-214ENST00000540113 KIF24Q5T7B8 1368 aa14.39□□□□□ -0.11
C11orf54-214ENST00000540113 TBC1D9Q6ZT07 1266 aa14.39□□□□□ -0.11
C11orf54-214ENST00000540113 ADGRL3Q9HAR2 1447 aa14.39□□□□□ -0.11
C11orf54-214ENST00000540113 SMARCA5O60264 1052 aaPredicted RBP14.39□□□□□ -0.11
C11orf54-214ENST00000540113 SLC4A2P04920 1241 aa14.39□□□□□ -0.11
C11orf54-214ENST00000540113 G2E3Q7L622 706 aa14.39□□□□□ -0.11
C11orf54-214ENST00000540113 OTUD7AQ8TE49 926 aaPredicted RBP14.39□□□□□ -0.11
C11orf54-214ENST00000540113 CHMP4BQ9H444 224 aaKnown RBP14.39□□□□□ -0.11
C11orf54-214ENST00000540113 NFAT5O94916 1531 aa14.38□□□□□ -0.11
C11orf54-214ENST00000540113 F6X3S4 739 aa14.38□□□□□ -0.11
C11orf54-214ENST00000540113 NPM3O75607 178 aaKnown RBP14.38□□□□□ -0.11
C11orf54-214ENST00000540113 NECTIN2Q92692 538 aa14.38□□□□□ -0.11
C11orf54-214ENST00000540113 LTV1Q96GA3 475 aaPredicted RBP14.38□□□□□ -0.11
C11orf54-214ENST00000540113 ARXQ96QS3 562 aa14.38□□□□□ -0.11
C11orf54-214ENST00000540113 MEIS3Q99687 375 aa14.38□□□□□ -0.11
C11orf54-214ENST00000540113 RBM42Q9BTD8 480 aaKnown RBP14.38□□□□□ -0.11
C11orf54-214ENST00000540113 FOXD4L1Q9NU39 408 aa14.38□□□□□ -0.11
C11orf54-214ENST00000540113 MSH6P52701 1360 aa14.38□□□□□ -0.11
C11orf54-214ENST00000540113 SLC4A10Q6U841 1118 aa14.37□□□□□ -0.11
C11orf54-214ENST00000540113 PPP4R3CPQ6ZMV5 832 aa14.37□□□□□ -0.11
C11orf54-214ENST00000540113 HSCBQ8IWL3 235 aa14.37□□□□□ -0.11
C11orf54-214ENST00000540113 GSPT1P15170 499 aaKnown RBP14.37□□□□□ -0.11
C11orf54-214ENST00000540113 INTS3Q68E01 1043 aaKnown RBP14.37□□□□□ -0.11
C11orf54-214ENST00000540113 TSPYL4Q9UJ04 414 aa14.37□□□□□ -0.11
C11orf54-214ENST00000540113 CD2BP2O95400 341 aaKnown RBP14.36□□□□□ -0.11
C11orf54-214ENST00000540113 RBM25P49756 843 aaKnown RBP14.36□□□□□ -0.11
C11orf54-214ENST00000540113 PLEKHM2Q8IWE5 1019 aa14.36□□□□□ -0.11
C11orf54-214ENST00000540113 GAS2L2Q8NHY3 880 aa14.36□□□□□ -0.11
C11orf54-214ENST00000540113 RTF1Q92541 710 aaKnown RBP14.36□□□□□ -0.11
C11orf54-214ENST00000540113 KIF2CQ99661 725 aa14.36□□□□□ -0.11
C11orf54-214ENST00000540113 ATP10DQ9P241 1426 aa14.36□□□□□ -0.11
C11orf54-214ENST00000540113 C14orf37Q86TY3 774 aa14.35□□□□□ -0.11
C11orf54-214ENST00000540113 RTL1A6NKG5 1358 aa14.35□□□□□ -0.11
C11orf54-214ENST00000540113 FAM208AQ9UK61 1670 aaKnown RBP14.35□□□□□ -0.11
C11orf54-214ENST00000540113 PLEKHG5O94827 1062 aa14.35□□□□□ -0.11
C11orf54-214ENST00000540113 DCTPP1Q9H773 170 aa14.35□□□□□ -0.11
C11orf54-214ENST00000540113 HAP1P54257 671 aaPredicted RBP14.34□□□□□ -0.11
C11orf54-214ENST00000540113 CEP85Q6P2H3 762 aa14.34□□□□□ -0.11
C11orf54-214ENST00000540113 GZF1Q9H116 711 aaPredicted RBP14.34□□□□□ -0.11
C11orf54-214ENST00000540113 USHBP1Q8N6Y0 703 aa14.34□□□□□ -0.11
C11orf54-214ENST00000540113 ANKRD44Q8N8A2 993 aa14.34□□□□□ -0.11
C11orf54-214ENST00000540113 PTPRCP08575 1304 aa14.33□□□□□ -0.11
C11orf54-214ENST00000540113 RGPD2P0DJD1 1756 aa14.33□□□□□ -0.12
C11orf54-214ENST00000540113 CHMP5Q9NZZ3 219 aa14.33□□□□□ -0.12
C11orf54-214ENST00000540113 MAP3K5Q99683 1374 aa14.32□□□□□ -0.12
C11orf54-214ENST00000540113 PHRF1Q9P1Y6 1649 aaKnown RBP14.32□□□□□ -0.12
C11orf54-214ENST00000540113 KDM4FA0A1W2PPD8 638 aa14.32□□□□□ -0.12
C11orf54-214ENST00000540113 HTATSF1O43719 755 aaKnown RBP14.32□□□□□ -0.12
C11orf54-214ENST00000540113 MCM4P33991 863 aa14.32□□□□□ -0.12
C11orf54-214ENST00000540113 GNAT3A8MTJ3 354 aa14.32□□□□□ -0.12
C11orf54-214ENST00000540113 HSP90AB1P08238 724 aaKnown RBP14.32□□□□□ -0.12
C11orf54-214ENST00000540113 ESCO1Q5FWF5 840 aa14.32□□□□□ -0.12
C11orf54-214ENST00000540113 IL17REQ8NFR9 667 aa14.32□□□□□ -0.12
C11orf54-214ENST00000540113 ZBTB7CA1YPR0 619 aa14.31□□□□□ -0.12
C11orf54-214ENST00000540113 CDC45O75419 566 aa14.31□□□□□ -0.12
C11orf54-214ENST00000540113 IP6K1Q92551 441 aa14.31□□□□□ -0.12
C11orf54-214ENST00000540113 TTC22Q5TAA0 569 aa14.3□□□□□ -0.12
C11orf54-214ENST00000540113 PSME1Q06323 249 aa14.3□□□□□ -0.12
C11orf54-214ENST00000540113 RPAP2Q8IXW5 612 aaPredicted RBP14.29□□□□□ -0.12
C11orf54-214ENST00000540113 ORAI2Q96SN7 254 aa14.29□□□□□ -0.12
C11orf54-214ENST00000540113 TRPM3Q9HCF6 1732 aaPredicted RBP14.29□□□□□ -0.12
C11orf54-214ENST00000540113 NBPF6Q5VWK0 638 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms