RNA–Protein interactions for RNA: ENST00000539611.1

ARF3-206, Transcript of ADP ribosylation factor 3, humanhuman

TSL 5

Gene ARF3, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF3-206ENST00000539611 DDX54Q8TDD1 881 aaKnown RBP29■■■□□ 2.23
ARF3-206ENST00000539611 BCL11BQ9C0K0 894 aaPredicted RBP29■■■□□ 2.23
ARF3-206ENST00000539611 IGSF1Q8N6C5 1336 aa28.99■■■□□ 2.23
ARF3-206ENST00000539611 CNGB1Q14028 1251 aaPredicted RBP28.99■■■□□ 2.23
ARF3-206ENST00000539611 CAMKK2Q96RR4 588 aa28.99■■■□□ 2.23
ARF3-206ENST00000539611 IL13P35225 146 aa28.96■■■□□ 2.23
ARF3-206ENST00000539611 EZH2Q15910 746 aaKnown RBP28.96■■■□□ 2.23
ARF3-206ENST00000539611 KCNQ2O43526 872 aa28.95■■■□□ 2.22
ARF3-206ENST00000539611 NHSQ6T4R5 1651 aa28.94■■■□□ 2.22
ARF3-206ENST00000539611 ACSBG1Q96GR2 724 aa28.94■■■□□ 2.22
ARF3-206ENST00000539611 PARD3Q8TEW0 1356 aa28.93■■■□□ 2.22
ARF3-206ENST00000539611 PKD1L3Q7Z443 1732 aa28.93■■■□□ 2.22
ARF3-206ENST00000539611 PLSCR1O15162 318 aa28.91■■■□□ 2.22
ARF3-206ENST00000539611 PCDH11XQ9BZA7 1347 aa28.91■■■□□ 2.22
ARF3-206ENST00000539611 PCDH11YQ9BZA8 1340 aa28.91■■■□□ 2.22
ARF3-206ENST00000539611 PLEKHG2Q9H7P9 1386 aa28.9■■■□□ 2.22
ARF3-206ENST00000539611 CYP27B1O15528 508 aa28.9■■■□□ 2.22
ARF3-206ENST00000539611 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.9■■■□□ 2.22
ARF3-206ENST00000539611 COL3A1P02461 1466 aaPredicted RBP28.9■■■□□ 2.22
ARF3-206ENST00000539611 AEBP1Q8IUX7 1158 aa28.88■■■□□ 2.21
ARF3-206ENST00000539611 KDRP35968 1356 aa28.88■■■□□ 2.21
ARF3-206ENST00000539611 RREB1Q92766 1687 aa28.87■■■□□ 2.21
ARF3-206ENST00000539611 DDX10Q13206 875 aaKnown RBP28.87■■■□□ 2.21
ARF3-206ENST00000539611 RGPD3A6NKT7 1758 aaPredicted RBP28.87■■■□□ 2.21
ARF3-206ENST00000539611 RGPD4Q7Z3J3 1758 aa28.87■■■□□ 2.21
ARF3-206ENST00000539611 SPG7Q9UQ90 795 aa28.86■■■□□ 2.21
ARF3-206ENST00000539611 DIAPH1O60610 1272 aaKnown RBP28.85■■■□□ 2.21
ARF3-206ENST00000539611 PPP2R1AP30153 589 aa28.85■■■□□ 2.21
ARF3-206ENST00000539611 SULT6B1Q6IMI4 303 aa28.84■■■□□ 2.21
ARF3-206ENST00000539611 DOT1LQ8TEK3 1739 aa28.83■■■□□ 2.21
ARF3-206ENST00000539611 PRIM1P49642 420 aaKnown RBP28.83■■■□□ 2.21
ARF3-206ENST00000539611 PROM2Q8N271 834 aa28.83■■■□□ 2.21
ARF3-206ENST00000539611 NKX1-1Q15270 411 aaPredicted RBP28.82■■■□□ 2.2
ARF3-206ENST00000539611 NUP188Q5SRE5 1749 aa28.81■■■□□ 2.2
ARF3-206ENST00000539611 BTAF1O14981 1849 aa28.8■■■□□ 2.2
ARF3-206ENST00000539611 PHKG2P15735 406 aa28.79■■■□□ 2.2
ARF3-206ENST00000539611 SYTL4Q96C24 671 aaPredicted RBP28.78■■■□□ 2.2
ARF3-206ENST00000539611 PLEKHO1Q53GL0 409 aaPredicted RBP28.77■■■□□ 2.2
ARF3-206ENST00000539611 IFNL2Q8IZJ0 200 aa28.77■■■□□ 2.2
ARF3-206ENST00000539611 TOGARAM1Q9Y4F4 1720 aa28.77■■■□□ 2.2
ARF3-206ENST00000539611 TXNRD1Q16881 649 aa28.76■■■□□ 2.19
ARF3-206ENST00000539611 AMOTQ4VCS5 1084 aa28.76■■■□□ 2.19
ARF3-206ENST00000539611 HMOX1P09601 288 aa28.75■■■□□ 2.19
ARF3-206ENST00000539611 CFAP53Q96M91 514 aa28.74■■■□□ 2.19
ARF3-206ENST00000539611 PSDA5PKW4 1024 aaPredicted RBP28.71■■■□□ 2.19
ARF3-206ENST00000539611 U2SURPO15042 1029 aaKnown RBP28.7■■■□□ 2.18
ARF3-206ENST00000539611 R3HDM1Q15032 1099 aaKnown RBP28.7■■■□□ 2.18
ARF3-206ENST00000539611 ZNF530Q6P9A1 599 aaPredicted RBP28.7■■■□□ 2.18
ARF3-206ENST00000539611 KAT6BQ8WYB5 2073 aa28.7■■■□□ 2.18
ARF3-206ENST00000539611 RALBP1Q15311 655 aa28.69■■■□□ 2.18
ARF3-206ENST00000539611 NBPF14Q5TI25 921 aa28.68■■■□□ 2.18
ARF3-206ENST00000539611 MPRIPQ6WCQ1 1025 aa28.68■■■□□ 2.18
ARF3-206ENST00000539611 ANO8Q9HCE9 1232 aaPredicted RBP28.68■■■□□ 2.18
ARF3-206ENST00000539611 LRRC4BQ9NT99 713 aa28.67■■■□□ 2.18
ARF3-206ENST00000539611 ZNF316A6NFI3 1004 aaPredicted RBP28.66■■■□□ 2.18
ARF3-206ENST00000539611 HSP90AB1P08238 724 aaKnown RBP28.66■■■□□ 2.18
ARF3-206ENST00000539611 PIGBQ92521 554 aa28.66■■■□□ 2.18
ARF3-206ENST00000539611 DCAF5Q96JK2 942 aa28.66■■■□□ 2.18
ARF3-206ENST00000539611 KDM6AO15550 1401 aaPredicted RBP28.66■■■□□ 2.18
ARF3-206ENST00000539611 ITGB4P16144 1822 aa28.66■■■□□ 2.18
ARF3-206ENST00000539611 LY75O60449 1722 aa28.64■■■□□ 2.18
ARF3-206ENST00000539611 NUDCQ9Y266 331 aa28.64■■■□□ 2.18
ARF3-206ENST00000539611 PAPPAQ13219 1627 aa28.64■■■□□ 2.18
ARF3-206ENST00000539611 C1orf141Q5JVX7 400 aa28.63■■■□□ 2.17
ARF3-206ENST00000539611 SLC27A3Q5K4L6 730 aa28.63■■■□□ 2.17
ARF3-206ENST00000539611 ERVV-2B6SEH9 535 aa28.62■■■□□ 2.17
ARF3-206ENST00000539611 MTHFSDQ2M296 383 aaKnown RBP28.62■■■□□ 2.17
ARF3-206ENST00000539611 RSPH6AQ9H0K4 717 aa28.62■■■□□ 2.17
ARF3-206ENST00000539611 AKAP4Q5JQC9 854 aa28.61■■■□□ 2.17
ARF3-206ENST00000539611 TMOD3Q9NYL9 352 aa28.61■■■□□ 2.17
ARF3-206ENST00000539611 PALLDQ8WX93 1383 aa28.6■■■□□ 2.17
ARF3-206ENST00000539611 SRCAPQ6ZRS2 3230 aa28.59■■■□□ 2.17
ARF3-206ENST00000539611 U2AF1L5P0DN76 240 aaPredicted RBP28.58■■■□□ 2.17
ARF3-206ENST00000539611 KCNQ4P56696 695 aa28.58■■■□□ 2.17
ARF3-206ENST00000539611 U2AF1Q01081 240 aaKnown RBP eCLIP28.58■■■□□ 2.17
ARF3-206ENST00000539611 PRKAR2BP31323 418 aa28.57■■■□□ 2.16
ARF3-206ENST00000539611 SLC15A2Q16348 729 aa28.57■■■□□ 2.16
ARF3-206ENST00000539611 SMARCC1Q92922 1105 aaPredicted RBP28.57■■■□□ 2.16
ARF3-206ENST00000539611 MYBBP1AQ9BQG0 1328 aaKnown RBP28.57■■■□□ 2.16
ARF3-206ENST00000539611 PHACTR3Q96KR7 559 aa28.56■■■□□ 2.16
ARF3-206ENST00000539611 PRKRIP1Q9H875 184 aaPredicted RBP28.56■■■□□ 2.16
ARF3-206ENST00000539611 STK32BQ9NY57 414 aa28.56■■■□□ 2.16
ARF3-206ENST00000539611 CCNL1Q9UK58 526 aaPredicted RBP28.56■■■□□ 2.16
ARF3-206ENST00000539611 FCHSD2O94868 740 aa28.55■■■□□ 2.16
ARF3-206ENST00000539611 ASAP1Q9ULH1 1129 aa28.55■■■□□ 2.16
ARF3-206ENST00000539611 ZNF827Q17R98 1081 aa28.54■■■□□ 2.16
ARF3-206ENST00000539611 LGR6Q9HBX8 967 aa28.54■■■□□ 2.16
ARF3-206ENST00000539611 ATG3Q9NT62 314 aa28.54■■■□□ 2.16
ARF3-206ENST00000539611 CABP4P57796 275 aa28.53■■■□□ 2.16
ARF3-206ENST00000539611 AKT1S1Q96B36 256 aa28.53■■■□□ 2.16
ARF3-206ENST00000539611 ADAMTS7Q9UKP4 1686 aa28.53■■■□□ 2.16
ARF3-206ENST00000539611 SCN11AQ9UI33 1791 aa28.52■■■□□ 2.16
ARF3-206ENST00000539611 GAS2L2Q8NHY3 880 aa28.52■■■□□ 2.16
ARF3-206ENST00000539611 RNMTO43148 476 aaKnown RBP28.51■■■□□ 2.15
ARF3-206ENST00000539611 NFATC2IPQ8NCF5 419 aa28.5■■■□□ 2.15
ARF3-206ENST00000539611 PDGFDQ9GZP0 370 aaPredicted RBP28.5■■■□□ 2.15
ARF3-206ENST00000539611 MRC1P22897 1456 aa28.49■■■□□ 2.15
ARF3-206ENST00000539611 CASZ1Q86V15 1759 aa28.49■■■□□ 2.15
ARF3-206ENST00000539611 MAP3K5Q99683 1374 aa28.48■■■□□ 2.15
ARF3-206ENST00000539611 LRP5O75197 1615 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms