RNA–Protein interactions for RNA: ENST00000538923.1

MRE11-208, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 5

Gene MRE11, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-208ENST00000538923 SSH2Q76I76 1423 aa12.88□□□□□ -0.35
MRE11-208ENST00000538923 PHRF1Q9P1Y6 1649 aaKnown RBP12.88□□□□□ -0.35
MRE11-208ENST00000538923 PDE3BQ13370 1112 aa12.88□□□□□ -0.35
MRE11-208ENST00000538923 CAMKK2Q96RR4 588 aa12.88□□□□□ -0.35
MRE11-208ENST00000538923 USP19O94966 1318 aa12.88□□□□□ -0.35
MRE11-208ENST00000538923 APBA3O96018 575 aa12.87□□□□□ -0.35
MRE11-208ENST00000538923 SRPK2P78362 688 aaKnown RBP12.87□□□□□ -0.35
MRE11-208ENST00000538923 C3orf67Q6ZVT6 689 aa12.87□□□□□ -0.35
MRE11-208ENST00000538923 NLRP13Q86W25 1043 aa12.87□□□□□ -0.35
MRE11-208ENST00000538923 TCP11L2Q8N4U5 519 aa12.87□□□□□ -0.35
MRE11-208ENST00000538923 TOPAZ1Q8N9V7 1692 aa12.86□□□□□ -0.35
MRE11-208ENST00000538923 LARP1Q6PKG0 1096 aaKnown RBP12.86□□□□□ -0.35
MRE11-208ENST00000538923 THRAP3Q9Y2W1 955 aaKnown RBP12.86□□□□□ -0.35
MRE11-208ENST00000538923 NRKQ7Z2Y5 1582 aa12.86□□□□□ -0.35
MRE11-208ENST00000538923 TNS1Q9HBL0 1735 aaKnown RBP12.85□□□□□ -0.35
MRE11-208ENST00000538923 BRD4O60885 1362 aaPredicted RBP12.85□□□□□ -0.35
MRE11-208ENST00000538923 GCP02774 474 aa12.85□□□□□ -0.35
MRE11-208ENST00000538923 POTEJP0CG39 1038 aa12.85□□□□□ -0.35
MRE11-208ENST00000538923 NBPF1Q3BBV0 1214 aa12.85□□□□□ -0.35
MRE11-208ENST00000538923 TMEM121BQ9BXQ6 578 aaPredicted RBP12.85□□□□□ -0.35
MRE11-208ENST00000538923 CAMTA1Q9Y6Y1 1673 aa12.85□□□□□ -0.35
MRE11-208ENST00000538923 PPIP5K1Q6PFW1 1433 aa12.85□□□□□ -0.35
MRE11-208ENST00000538923 CENPJQ9HC77 1338 aaPredicted RBP12.85□□□□□ -0.35
MRE11-208ENST00000538923 C11orf95C9JLR9 678 aaPredicted RBP12.84□□□□□ -0.35
MRE11-208ENST00000538923 KIAA1210Q9ULL0 1709 aa12.84□□□□□ -0.35
MRE11-208ENST00000538923 MAMSTRQ6ZN01 415 aa12.83□□□□□ -0.36
MRE11-208ENST00000538923 SCUBE2Q9NQ36 999 aa12.83□□□□□ -0.36
MRE11-208ENST00000538923 NBPF14Q5TI25 921 aa12.82□□□□□ -0.36
MRE11-208ENST00000538923 COL5A2P05997 1499 aaPredicted RBP12.82□□□□□ -0.36
MRE11-208ENST00000538923 LMO7Q8WWI1 1683 aa12.82□□□□□ -0.36
MRE11-208ENST00000538923 CRB1P82279 1406 aa12.81□□□□□ -0.36
MRE11-208ENST00000538923 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.81□□□□□ -0.36
MRE11-208ENST00000538923 USP6P35125 1406 aa12.8□□□□□ -0.36
MRE11-208ENST00000538923 CABP1Q9NZU7 370 aa12.8□□□□□ -0.36
MRE11-208ENST00000538923 AATKQ6ZMQ8 1374 aa12.8□□□□□ -0.36
MRE11-208ENST00000538923 TSHZ2Q9NRE2 1034 aa12.79□□□□□ -0.36
MRE11-208ENST00000538923 OVOS2A0A0G2JMS6 1433 aa12.79□□□□□ -0.36
MRE11-208ENST00000538923 OVOS2A0A0J9YW53 1432 aa12.79□□□□□ -0.36
MRE11-208ENST00000538923 OVOS2Q6IE36 1432 aa12.79□□□□□ -0.36
MRE11-208ENST00000538923 ZBTB7CA1YPR0 619 aa12.78□□□□□ -0.36
MRE11-208ENST00000538923 EVC2Q86UK5 1308 aa12.78□□□□□ -0.36
MRE11-208ENST00000538923 SLIT3O75094 1523 aa12.78□□□□□ -0.36
MRE11-208ENST00000538923 TOM1L2Q6ZVM7 507 aa12.77□□□□□ -0.37
MRE11-208ENST00000538923 DDB1Q16531 1140 aa12.76□□□□□ -0.37
MRE11-208ENST00000538923 RREB1Q92766 1687 aa12.76□□□□□ -0.37
MRE11-208ENST00000538923 PARP4Q9UKK3 1724 aaKnown RBP12.76□□□□□ -0.37
MRE11-208ENST00000538923 PLSCR1O15162 318 aa12.75□□□□□ -0.37
MRE11-208ENST00000538923 KCNH5Q8NCM2 988 aa12.75□□□□□ -0.37
MRE11-208ENST00000538923 CDCA7Q9BWT1 371 aaPredicted RBP12.75□□□□□ -0.37
MRE11-208ENST00000538923 SPON1Q9HCB6 807 aa12.75□□□□□ -0.37
MRE11-208ENST00000538923 NUP188Q5SRE5 1749 aa12.74□□□□□ -0.37
MRE11-208ENST00000538923 QRICH2Q9H0J4 1663 aa12.74□□□□□ -0.37
MRE11-208ENST00000538923 CPSF1Q10570 1443 aaKnown RBP12.74□□□□□ -0.37
MRE11-208ENST00000538923 WDR17Q8IZU2 1322 aa12.74□□□□□ -0.37
MRE11-208ENST00000538923 L3MBTL2Q969R5 705 aa12.74□□□□□ -0.37
MRE11-208ENST00000538923 PPP1R1BQ9UD71 204 aaPredicted RBP12.74□□□□□ -0.37
MRE11-208ENST00000538923 KCNQ2O43526 872 aa12.73□□□□□ -0.37
MRE11-208ENST00000538923 AXIN2Q9Y2T1 843 aa12.73□□□□□ -0.37
MRE11-208ENST00000538923 ROCK2O75116 1388 aaKnown RBP12.72□□□□□ -0.37
MRE11-208ENST00000538923 TTC21BQ7Z4L5 1316 aa12.72□□□□□ -0.37
MRE11-208ENST00000538923 TTC21AQ8NDW8 1320 aa12.72□□□□□ -0.37
MRE11-208ENST00000538923 ARHGEF25Q86VW2 580 aa12.72□□□□□ -0.37
MRE11-208ENST00000538923 SLAIN1Q8ND83 568 aa12.72□□□□□ -0.37
MRE11-208ENST00000538923 TMC2Q8TDI7 906 aa12.72□□□□□ -0.37
MRE11-208ENST00000538923 OTUD5Q96G74 571 aa12.72□□□□□ -0.37
MRE11-208ENST00000538923 LRRC37A3O60309 1634 aa12.72□□□□□ -0.37
MRE11-208ENST00000538923 BCL9O00512 1426 aa12.71□□□□□ -0.37
MRE11-208ENST00000538923 PEAK1Q9H792 1746 aa12.71□□□□□ -0.37
MRE11-208ENST00000538923 NINLQ9Y2I6 1382 aa12.71□□□□□ -0.37
MRE11-208ENST00000538923 PIK3C2AO00443 1686 aa12.71□□□□□ -0.37
MRE11-208ENST00000538923 MARCH10Q8NA82 808 aaPredicted RBP12.71□□□□□ -0.37
MRE11-208ENST00000538923 CSB-PGBD3P0DP91 1061 aa12.7□□□□□ -0.38
MRE11-208ENST00000538923 TMEM92Q6UXU6 159 aa12.7□□□□□ -0.38
MRE11-208ENST00000538923 CARD10Q9BWT7 1032 aa12.7□□□□□ -0.38
MRE11-208ENST00000538923 TRPM1Q7Z4N2 1603 aa12.7□□□□□ -0.38
MRE11-208ENST00000538923 YY1P25490 414 aa12.69□□□□□ -0.38
MRE11-208ENST00000538923 RGPD3A6NKT7 1758 aaPredicted RBP12.69□□□□□ -0.38
MRE11-208ENST00000538923 RGPD4Q7Z3J3 1758 aa12.69□□□□□ -0.38
MRE11-208ENST00000538923 KTN1Q86UP2 1357 aaKnown RBP12.69□□□□□ -0.38
MRE11-208ENST00000538923 EXOC5O00471 708 aa12.68□□□□□ -0.38
MRE11-208ENST00000538923 PDE4AP27815 886 aa12.68□□□□□ -0.38
MRE11-208ENST00000538923 PTF1AQ7RTS3 328 aa12.68□□□□□ -0.38
MRE11-208ENST00000538923 ANO8Q9HCE9 1232 aaPredicted RBP12.68□□□□□ -0.38
MRE11-208ENST00000538923 CCDC7Q96M83 1385 aa12.68□□□□□ -0.38
MRE11-208ENST00000538923 COL18A1P39060 1754 aa12.67□□□□□ -0.38
MRE11-208ENST00000538923 C2orf72A6NCS6 295 aa12.67□□□□□ -0.38
MRE11-208ENST00000538923 SIN3AQ96ST3 1273 aa12.67□□□□□ -0.38
MRE11-208ENST00000538923 CRISPLD2Q9H0B8 497 aa12.67□□□□□ -0.38
MRE11-208ENST00000538923 ABCC6O95255 1503 aa12.67□□□□□ -0.38
MRE11-208ENST00000538923 NEUROD1Q13562 356 aa12.66□□□□□ -0.38
MRE11-208ENST00000538923 GPHNQ9NQX3 736 aaPredicted RBP12.66□□□□□ -0.38
MRE11-208ENST00000538923 NFAT5O94916 1531 aa12.66□□□□□ -0.38
MRE11-208ENST00000538923 SBNO2Q9Y2G9 1366 aa12.66□□□□□ -0.38
MRE11-208ENST00000538923 TXNRD1Q16881 649 aa12.65□□□□□ -0.38
MRE11-208ENST00000538923 LARP6Q9BRS8 491 aaKnown RBP12.65□□□□□ -0.38
MRE11-208ENST00000538923 STK32BQ9NY57 414 aa12.65□□□□□ -0.38
MRE11-208ENST00000538923 TNS2Q63HR2 1409 aa12.64□□□□□ -0.39
MRE11-208ENST00000538923 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.64□□□□□ -0.39
MRE11-208ENST00000538923 USP31Q70CQ4 1352 aa12.64□□□□□ -0.39
MRE11-208ENST00000538923 KIF3CO14782 793 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms