RNA–Protein interactions for RNA: ENST00000538451.1

LDHA-216, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,345 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-216ENST00000538451 RSPH6AQ9H0K4 717 aa13.25□□□□□ -0.29
LDHA-216ENST00000538451 PEAK1Q9H792 1746 aa13.25□□□□□ -0.29
LDHA-216ENST00000538451 RGS12O14924 1447 aa13.24□□□□□ -0.29
LDHA-216ENST00000538451 ERBB3P21860 1342 aa13.24□□□□□ -0.29
LDHA-216ENST00000538451 CALD1Q05682 793 aaKnown RBP13.24□□□□□ -0.29
LDHA-216ENST00000538451 GJD4Q96KN9 370 aaPredicted RBP13.24□□□□□ -0.29
LDHA-216ENST00000538451 EYA1Q99502 592 aa13.24□□□□□ -0.29
LDHA-216ENST00000538451 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.24□□□□□ -0.29
LDHA-216ENST00000538451 FAM83GA6ND36 823 aa13.23□□□□□ -0.29
LDHA-216ENST00000538451 CHRNA2Q15822 529 aa13.23□□□□□ -0.29
LDHA-216ENST00000538451 CCDC27Q2M243 656 aa13.23□□□□□ -0.29
LDHA-216ENST00000538451 PLEKHF1Q96S99 279 aa13.23□□□□□ -0.29
LDHA-216ENST00000538451 CRYBG1Q9Y4K1 1723 aa13.23□□□□□ -0.29
LDHA-216ENST00000538451 KDRP35968 1356 aa13.22□□□□□ -0.29
LDHA-216ENST00000538451 GAS2L2Q8NHY3 880 aa13.22□□□□□ -0.29
LDHA-216ENST00000538451 NLRP2Q9NX02 1062 aa13.22□□□□□ -0.29
LDHA-216ENST00000538451 NWD2Q9ULI1 1742 aa13.21□□□□□ -0.29
LDHA-216ENST00000538451 PLEKHG2Q9H7P9 1386 aa13.21□□□□□ -0.29
LDHA-216ENST00000538451 NEUROD2Q15784 382 aa13.21□□□□□ -0.29
LDHA-216ENST00000538451 VPS72Q15906 364 aa13.21□□□□□ -0.29
LDHA-216ENST00000538451 AMOTQ4VCS5 1084 aa13.21□□□□□ -0.29
LDHA-216ENST00000538451 TOM1L2Q6ZVM7 507 aa13.21□□□□□ -0.29
LDHA-216ENST00000538451 RAPGEF4Q8WZA2 1011 aa13.21□□□□□ -0.29
LDHA-216ENST00000538451 BTG4Q9NY30 223 aa13.21□□□□□ -0.29
LDHA-216ENST00000538451 AXIN2Q9Y2T1 843 aa13.21□□□□□ -0.29
LDHA-216ENST00000538451 CCDC9Q9Y3X0 531 aaKnown RBP13.21□□□□□ -0.29
LDHA-216ENST00000538451 SALL2Q9Y467 1007 aaPredicted RBP13.21□□□□□ -0.29
LDHA-216ENST00000538451 FAM208AQ9UK61 1670 aaKnown RBP13.21□□□□□ -0.3
LDHA-216ENST00000538451 WDR17Q8IZU2 1322 aa13.2□□□□□ -0.3
LDHA-216ENST00000538451 TMPOP42166 694 aaKnown RBP13.2□□□□□ -0.3
LDHA-216ENST00000538451 RIPK4P57078 832 aa13.2□□□□□ -0.3
LDHA-216ENST00000538451 GOLGA2Q08379 1002 aa13.2□□□□□ -0.3
LDHA-216ENST00000538451 NFE2L2Q16236 605 aa13.2□□□□□ -0.3
LDHA-216ENST00000538451 PLEKHO1Q53GL0 409 aaPredicted RBP13.2□□□□□ -0.3
LDHA-216ENST00000538451 RTF1Q92541 710 aaKnown RBP13.2□□□□□ -0.3
LDHA-216ENST00000538451 COL14A1Q05707 1796 aaKnown RBP13.2□□□□□ -0.3
LDHA-216ENST00000538451 PLCH1Q4KWH8 1693 aa13.2□□□□□ -0.3
LDHA-216ENST00000538451 NBPF6Q5VWK0 638 aa13.19□□□□□ -0.3
LDHA-216ENST00000538451 WDR63Q8IWG1 891 aa13.19□□□□□ -0.3
LDHA-216ENST00000538451 NBPF4Q96M43 638 aa13.19□□□□□ -0.3
LDHA-216ENST00000538451 RGPD1P0DJD0 1748 aa13.19□□□□□ -0.3
LDHA-216ENST00000538451 TATP17735 454 aaPredicted RBP13.18□□□□□ -0.3
LDHA-216ENST00000538451 STRN4Q9NRL3 753 aa13.18□□□□□ -0.3
LDHA-216ENST00000538451 E9PSI1 815 aa13.17□□□□□ -0.3
LDHA-216ENST00000538451 HTATSF1O43719 755 aaKnown RBP13.17□□□□□ -0.3
LDHA-216ENST00000538451 AEBP1Q8IUX7 1158 aa13.17□□□□□ -0.3
LDHA-216ENST00000538451 UPF1Q92900 1129 aaKnown RBP eCLIP13.17□□□□□ -0.31e-6■■□□□ 13.1
LDHA-216ENST00000538451 CARD10Q9BWT7 1032 aa13.17□□□□□ -0.3
LDHA-216ENST00000538451 SPG7Q9UQ90 795 aa13.17□□□□□ -0.3
LDHA-216ENST00000538451 COL18A1P39060 1754 aa13.17□□□□□ -0.3
LDHA-216ENST00000538451 GLI3P10071 1580 aa13.16□□□□□ -0.3
LDHA-216ENST00000538451 C1orf141Q5JVX7 400 aa13.16□□□□□ -0.3
LDHA-216ENST00000538451 WWC1Q8IX03 1113 aa13.16□□□□□ -0.3
LDHA-216ENST00000538451 MYH16Q9H6N6 1097 aa13.16□□□□□ -0.3
LDHA-216ENST00000538451 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.16□□□□□ -0.3
LDHA-216ENST00000538451 RRP7AQ9Y3A4 280 aaKnown RBP13.16□□□□□ -0.3
LDHA-216ENST00000538451 COL5A2P05997 1499 aaPredicted RBP13.16□□□□□ -0.3
LDHA-216ENST00000538451 USHBP1Q8N6Y0 703 aa13.15□□□□□ -0.3
LDHA-216ENST00000538451 PHACTR3Q96KR7 559 aa13.15□□□□□ -0.3
LDHA-216ENST00000538451 NRAPQ86VF7 1730 aa13.15□□□□□ -0.3
LDHA-216ENST00000538451 IL16Q14005 1332 aa13.15□□□□□ -0.3
LDHA-216ENST00000538451 LMO7Q8WWI1 1683 aa13.15□□□□□ -0.3
LDHA-216ENST00000538451 CAMTA1Q9Y6Y1 1673 aa13.15□□□□□ -0.3
LDHA-216ENST00000538451 CRB1P82279 1406 aa13.15□□□□□ -0.3
LDHA-216ENST00000538451 GNAT3A8MTJ3 354 aa13.14□□□□□ -0.31
LDHA-216ENST00000538451 ONECUT3O60422 494 aaPredicted RBP13.14□□□□□ -0.31
LDHA-216ENST00000538451 CDCA7Q9BWT1 371 aaPredicted RBP13.14□□□□□ -0.31
LDHA-216ENST00000538451 THRAP3Q9Y2W1 955 aaKnown RBP13.14□□□□□ -0.31
LDHA-216ENST00000538451 NCAPD2Q15021 1401 aa13.14□□□□□ -0.31
LDHA-216ENST00000538451 A0A0G2JS52 829 aa13.13□□□□□ -0.31
LDHA-216ENST00000538451 MYT1Q01538 1121 aa13.13□□□□□ -0.31
LDHA-216ENST00000538451 SEPT12Q8IYM1 358 aa13.13□□□□□ -0.31
LDHA-216ENST00000538451 RGPD5Q99666 1765 aa13.13□□□□□ -0.31
LDHA-216ENST00000538451 SPATA31A5Q5VU36 1347 aa13.13□□□□□ -0.31
LDHA-216ENST00000538451 SPATA31A7Q8IWB4 1347 aa13.13□□□□□ -0.31
LDHA-216ENST00000538451 ZNF521Q96K83 1311 aa13.13□□□□□ -0.31
LDHA-216ENST00000538451 HSP90AB1P08238 724 aaKnown RBP13.13□□□□□ -0.31
LDHA-216ENST00000538451 IL2RBP14784 551 aa13.13□□□□□ -0.31
LDHA-216ENST00000538451 MTHFSDQ2M296 383 aaKnown RBP13.13□□□□□ -0.31
LDHA-216ENST00000538451 AKAP4Q5JQC9 854 aa13.13□□□□□ -0.31
LDHA-216ENST00000538451 SENP3-EIF4A1A0A087X0R7 540 aa13.12□□□□□ -0.31
LDHA-216ENST00000538451 GNAI1P63096 354 aa13.12□□□□□ -0.31
LDHA-216ENST00000538451 FAM98CQ17RN3 349 aaKnown RBP13.12□□□□□ -0.31
LDHA-216ENST00000538451 ZNF530Q6P9A1 599 aaPredicted RBP13.12□□□□□ -0.31
LDHA-216ENST00000538451 LARP1Q6PKG0 1096 aaKnown RBP13.12□□□□□ -0.31
LDHA-216ENST00000538451 MAP3K5Q99683 1374 aa13.11□□□□□ -0.31
LDHA-216ENST00000538451 SLFN5Q08AF3 891 aa13.11□□□□□ -0.31
LDHA-216ENST00000538451 CCDC125Q86Z20 511 aa13.11□□□□□ -0.31
LDHA-216ENST00000538451 TRIM35Q9UPQ4 493 aa13.11□□□□□ -0.31
LDHA-216ENST00000538451 KRT27Q7Z3Y8 459 aa13.1□□□□□ -0.31
LDHA-216ENST00000538451 IFNL2Q8IZJ0 200 aa13.1□□□□□ -0.31
LDHA-216ENST00000538451 IFT57Q9NWB7 429 aa13.1□□□□□ -0.31
LDHA-216ENST00000538451 SPATA31A1Q5TZJ5 1347 aa13.09□□□□□ -0.31
LDHA-216ENST00000538451 PRKCSHP14314 528 aaPredicted RBP13.09□□□□□ -0.31
LDHA-216ENST00000538451 POLA2Q14181 598 aa13.09□□□□□ -0.31
LDHA-216ENST00000538451 ZCRB1Q8TBF4 217 aaKnown RBP13.09□□□□□ -0.31
LDHA-216ENST00000538451 USP35Q9P2H5 1018 aa13.09□□□□□ -0.31
LDHA-216ENST00000538451 PCDH11XQ9BZA7 1347 aa13.08□□□□□ -0.31
LDHA-216ENST00000538451 PCDH11YQ9BZA8 1340 aa13.08□□□□□ -0.31
LDHA-216ENST00000538451 RGPD2P0DJD1 1756 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms