RNA–Protein interactions for RNA: ENST00000537551.5

CHFR-215, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 596 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-215ENST00000537551 SBF2Q86WG5 1849 aa31.54■■■□□ 2.64
CHFR-215ENST00000537551 ZEB1P37275 1124 aaPredicted RBP31.54■■■□□ 2.64
CHFR-215ENST00000537551 NPC1L1Q9UHC9 1359 aa31.54■■■□□ 2.64
CHFR-215ENST00000537551 KCNQ2O43526 872 aa31.52■■■□□ 2.64
CHFR-215ENST00000537551 MTHFSP49914 203 aa31.51■■■□□ 2.63
CHFR-215ENST00000537551 PARD3Q8TEW0 1356 aa31.51■■■□□ 2.63
CHFR-215ENST00000537551 KAT6BQ8WYB5 2073 aa31.48■■■□□ 2.63
CHFR-215ENST00000537551 PLSCR1O15162 318 aa31.48■■■□□ 2.63
CHFR-215ENST00000537551 NCAPD2Q15021 1401 aa31.47■■■□□ 2.63
CHFR-215ENST00000537551 PCDH11XQ9BZA7 1347 aa31.46■■■□□ 2.63
CHFR-215ENST00000537551 PCDH11YQ9BZA8 1340 aa31.46■■■□□ 2.63
CHFR-215ENST00000537551 SPG7Q9UQ90 795 aa31.45■■■□□ 2.63
CHFR-215ENST00000537551 IGSF1Q8N6C5 1336 aa31.45■■■□□ 2.62
CHFR-215ENST00000537551 SYTL4Q96C24 671 aaPredicted RBP31.44■■■□□ 2.62
CHFR-215ENST00000537551 IL13P35225 146 aa31.41■■■□□ 2.62
CHFR-215ENST00000537551 PRIM1P49642 420 aaKnown RBP31.41■■■□□ 2.62
CHFR-215ENST00000537551 NHSQ6T4R5 1651 aa31.41■■■□□ 2.62
CHFR-215ENST00000537551 SHANK3Q9BYB0 1731 aa31.41■■■□□ 2.62
CHFR-215ENST00000537551 PSDA5PKW4 1024 aaPredicted RBP31.39■■■□□ 2.62
CHFR-215ENST00000537551 CYP27B1O15528 508 aa31.39■■■□□ 2.62
CHFR-215ENST00000537551 NBPF14Q5TI25 921 aa31.39■■■□□ 2.62
CHFR-215ENST00000537551 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.39■■■□□ 2.62
CHFR-215ENST00000537551 DIAPH1O60610 1272 aaKnown RBP31.37■■■□□ 2.61
CHFR-215ENST00000537551 SULT6B1Q6IMI4 303 aa31.37■■■□□ 2.61
CHFR-215ENST00000537551 R3HDM1Q15032 1099 aaKnown RBP31.36■■■□□ 2.61
CHFR-215ENST00000537551 AEBP1Q8IUX7 1158 aa31.36■■■□□ 2.61
CHFR-215ENST00000537551 TXNRD1Q16881 649 aa31.35■■■□□ 2.61
CHFR-215ENST00000537551 PROM2Q8N271 834 aa31.35■■■□□ 2.61
CHFR-215ENST00000537551 RREB1Q92766 1687 aa31.35■■■□□ 2.61
CHFR-215ENST00000537551 PLEKHO1Q53GL0 409 aaPredicted RBP31.34■■■□□ 2.61
CHFR-215ENST00000537551 PKD1L3Q7Z443 1732 aa31.33■■■□□ 2.61
CHFR-215ENST00000537551 DDX10Q13206 875 aaKnown RBP31.33■■■□□ 2.61
CHFR-215ENST00000537551 IFNL2Q8IZJ0 200 aa31.33■■■□□ 2.61
CHFR-215ENST00000537551 RGPD3A6NKT7 1758 aaPredicted RBP31.33■■■□□ 2.61
CHFR-215ENST00000537551 RGPD4Q7Z3J3 1758 aa31.33■■■□□ 2.61
CHFR-215ENST00000537551 DOT1LQ8TEK3 1739 aa31.32■■■□□ 2.6
CHFR-215ENST00000537551 BTAF1O14981 1849 aa31.31■■■□□ 2.6
CHFR-215ENST00000537551 NUP188Q5SRE5 1749 aa31.3■■■□□ 2.6
CHFR-215ENST00000537551 CFAP53Q96M91 514 aa31.3■■■□□ 2.6
CHFR-215ENST00000537551 PLEKHG2Q9H7P9 1386 aa31.3■■■□□ 2.6
CHFR-215ENST00000537551 PHKG2P15735 406 aa31.29■■■□□ 2.6
CHFR-215ENST00000537551 PPP2R1AP30153 589 aa31.29■■■□□ 2.6
CHFR-215ENST00000537551 NKX1-1Q15270 411 aaPredicted RBP31.29■■■□□ 2.6
CHFR-215ENST00000537551 AMOTQ4VCS5 1084 aa31.29■■■□□ 2.6
CHFR-215ENST00000537551 HMOX1P09601 288 aa31.28■■■□□ 2.6
CHFR-215ENST00000537551 MPRIPQ6WCQ1 1025 aa31.28■■■□□ 2.6
CHFR-215ENST00000537551 U2SURPO15042 1029 aaKnown RBP31.26■■■□□ 2.59
CHFR-215ENST00000537551 ZNF530Q6P9A1 599 aaPredicted RBP31.26■■■□□ 2.59
CHFR-215ENST00000537551 KDRP35968 1356 aa31.26■■■□□ 2.59
CHFR-215ENST00000537551 HSP90AB1P08238 724 aaKnown RBP31.22■■■□□ 2.59
CHFR-215ENST00000537551 COL3A1P02461 1466 aaPredicted RBP31.21■■■□□ 2.59
CHFR-215ENST00000537551 C1orf141Q5JVX7 400 aa31.21■■■□□ 2.59
CHFR-215ENST00000537551 ANO8Q9HCE9 1232 aaPredicted RBP31.21■■■□□ 2.59
CHFR-215ENST00000537551 STK32BQ9NY57 414 aa31.21■■■□□ 2.59
CHFR-215ENST00000537551 SLC27A3Q5K4L6 730 aa31.2■■■□□ 2.59
CHFR-215ENST00000537551 TMOD3Q9NYL9 352 aa31.19■■■□□ 2.58
CHFR-215ENST00000537551 NUDCQ9Y266 331 aa31.19■■■□□ 2.58
CHFR-215ENST00000537551 PIGBQ92521 554 aa31.18■■■□□ 2.58
CHFR-215ENST00000537551 LRRC4BQ9NT99 713 aa31.18■■■□□ 2.58
CHFR-215ENST00000537551 DCAF5Q96JK2 942 aa31.17■■■□□ 2.58
CHFR-215ENST00000537551 TOGARAM1Q9Y4F4 1720 aa31.16■■■□□ 2.58
CHFR-215ENST00000537551 KCNQ4P56696 695 aa31.15■■■□□ 2.58
CHFR-215ENST00000537551 SLC15A2Q16348 729 aa31.15■■■□□ 2.58
CHFR-215ENST00000537551 CCNL1Q9UK58 526 aaPredicted RBP31.15■■■□□ 2.58
CHFR-215ENST00000537551 SMARCC1Q92922 1105 aaPredicted RBP31.14■■■□□ 2.58
CHFR-215ENST00000537551 ITGB4P16144 1822 aa31.14■■■□□ 2.58
CHFR-215ENST00000537551 ERVV-2B6SEH9 535 aa31.13■■■□□ 2.57
CHFR-215ENST00000537551 RALBP1Q15311 655 aa31.13■■■□□ 2.57
CHFR-215ENST00000537551 PALLDQ8WX93 1383 aa31.12■■■□□ 2.57
CHFR-215ENST00000537551 AKAP4Q5JQC9 854 aa31.11■■■□□ 2.57
CHFR-215ENST00000537551 U2AF1L5P0DN76 240 aaPredicted RBP31.1■■■□□ 2.57
CHFR-215ENST00000537551 CABP4P57796 275 aa31.1■■■□□ 2.57
CHFR-215ENST00000537551 U2AF1Q01081 240 aaKnown RBP eCLIP31.1■■■□□ 2.57
CHFR-215ENST00000537551 MTHFSDQ2M296 383 aaKnown RBP31.09■■■□□ 2.57
CHFR-215ENST00000537551 LY75O60449 1722 aa31.08■■■□□ 2.57
CHFR-215ENST00000537551 KDM6AO15550 1401 aaPredicted RBP31.07■■■□□ 2.57
CHFR-215ENST00000537551 ASAP1Q9ULH1 1129 aa31.07■■■□□ 2.56
CHFR-215ENST00000537551 ZNF827Q17R98 1081 aa31.06■■■□□ 2.56
CHFR-215ENST00000537551 PRKAR2BP31323 418 aa31.05■■■□□ 2.56
CHFR-215ENST00000537551 HMGB2P26583 209 aaKnown RBP31.04■■■□□ 2.56
CHFR-215ENST00000537551 PAPPAQ13219 1627 aa31.03■■■□□ 2.56
CHFR-215ENST00000537551 ZNF316A6NFI3 1004 aaPredicted RBP31.03■■■□□ 2.56
CHFR-215ENST00000537551 AKT1S1Q96B36 256 aa31.03■■■□□ 2.56
CHFR-215ENST00000537551 PDGFDQ9GZP0 370 aaPredicted RBP31.03■■■□□ 2.56
CHFR-215ENST00000537551 RSPH6AQ9H0K4 717 aa31.03■■■□□ 2.56
CHFR-215ENST00000537551 ATG3Q9NT62 314 aa31.03■■■□□ 2.56
CHFR-215ENST00000537551 NFATC2IPQ8NCF5 419 aa31.02■■■□□ 2.56
CHFR-215ENST00000537551 GAS2L2Q8NHY3 880 aa31.02■■■□□ 2.56
CHFR-215ENST00000537551 TFCP2L1Q9NZI6 479 aa31.02■■■□□ 2.56
CHFR-215ENST00000537551 LGR6Q9HBX8 967 aa31.01■■■□□ 2.55
CHFR-215ENST00000537551 LOC102724428A0A0B4J2F2 783 aa31■■■□□ 2.55
CHFR-215ENST00000537551 RNMTO43148 476 aaKnown RBP31■■■□□ 2.55
CHFR-215ENST00000537551 FCHSD2O94868 740 aa31■■■□□ 2.55
CHFR-215ENST00000537551 SIK1P57059 783 aa31■■■□□ 2.55
CHFR-215ENST00000537551 SPON1Q9HCB6 807 aa31■■■□□ 2.55
CHFR-215ENST00000537551 ZBTB7AO95365 584 aa30.98■■■□□ 2.55
CHFR-215ENST00000537551 PHACTR3Q96KR7 559 aa30.98■■■□□ 2.55
CHFR-215ENST00000537551 MYBBP1AQ9BQG0 1328 aaKnown RBP30.98■■■□□ 2.55
CHFR-215ENST00000537551 ATP6V1AP38606 617 aa30.97■■■□□ 2.55
CHFR-215ENST00000537551 RBM42Q9BTD8 480 aaKnown RBP30.97■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms