RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 RNF20Q5VTR2 975 aa11.11□□□□□ -0.63
VBP1-203ENST00000535916 CC2D2BQ6DHV5 1058 aa11.11□□□□□ -0.63
VBP1-203ENST00000535916 TRIM52Q96A61 297 aa11.11□□□□□ -0.63
VBP1-203ENST00000535916 APBB1O00213 710 aa11.1□□□□□ -0.63
VBP1-203ENST00000535916 SCTRP47872 440 aa11.1□□□□□ -0.63
VBP1-203ENST00000535916 MCCD1P59942 119 aaPredicted RBP11.1□□□□□ -0.63
VBP1-203ENST00000535916 RNFT1Q5M7Z0 435 aa11.1□□□□□ -0.63
VBP1-203ENST00000535916 KCTD17Q8N5Z5 321 aa11.1□□□□□ -0.63
VBP1-203ENST00000535916 ZNF330Q9Y3S2 320 aaPredicted RBP11.1□□□□□ -0.63
VBP1-203ENST00000535916 PCDHB11Q9Y5F2 797 aa11.1□□□□□ -0.63
VBP1-203ENST00000535916 MEN1O00255 615 aa11.09□□□□□ -0.63
VBP1-203ENST00000535916 RHOQP17081 205 aa11.09□□□□□ -0.63
VBP1-203ENST00000535916 RNF144AP50876 292 aaPredicted RBP11.09□□□□□ -0.63
VBP1-203ENST00000535916 PRICKLE2Q7Z3G6 844 aa11.09□□□□□ -0.63
VBP1-203ENST00000535916 CCDC125Q86Z20 511 aa11.09□□□□□ -0.63
VBP1-203ENST00000535916 SV2AQ7L0J3 742 aa11.08□□□□□ -0.64
VBP1-203ENST00000535916 ZNF592Q92610 1267 aa11.08□□□□□ -0.64
VBP1-203ENST00000535916 A0A1W2PRU2 124 aa11.07□□□□□ -0.64
VBP1-203ENST00000535916 CUEDC1Q9NWM3 386 aaPredicted RBP11.07□□□□□ -0.64
VBP1-203ENST00000535916 TBC1D2BQ9UPU7 963 aa11.07□□□□□ -0.64
VBP1-203ENST00000535916 CYP2U1Q7Z449 544 aa11.05□□□□□ -0.64
VBP1-203ENST00000535916 OSBPL3Q9H4L5 887 aa11.05□□□□□ -0.64
VBP1-203ENST00000535916 GPC1P35052 558 aa11.04□□□□□ -0.64
VBP1-203ENST00000535916 TRAK2O60296 914 aa11.03□□□□□ -0.64
VBP1-203ENST00000535916 NLRP3Q96P20 1036 aa11.03□□□□□ -0.64
VBP1-203ENST00000535916 CCDC85AQ96PX6 553 aaPredicted RBP11.02□□□□□ -0.65
VBP1-203ENST00000535916 ARHGEF10LQ9HCE6 1279 aa11.02□□□□□ -0.65
VBP1-203ENST00000535916 CEP126Q9P2H0 1117 aa11.02□□□□□ -0.65
VBP1-203ENST00000535916 KCNMA1Q12791 1236 aa11.01□□□□□ -0.65
VBP1-203ENST00000535916 CLN3Q13286 438 aa11.01□□□□□ -0.65
VBP1-203ENST00000535916 CDCA7Q9BWT1 371 aaPredicted RBP11.01□□□□□ -0.65
VBP1-203ENST00000535916 POU4F2Q12837 409 aa11□□□□□ -0.65
VBP1-203ENST00000535916 IRF5Q13568 498 aa11□□□□□ -0.65
VBP1-203ENST00000535916 SLC27A3Q5K4L6 730 aa11□□□□□ -0.65
VBP1-203ENST00000535916 ZNF385CQ66K41 422 aaPredicted RBP11□□□□□ -0.65
VBP1-203ENST00000535916 ESF1Q9H501 851 aaKnown RBP11□□□□□ -0.65
VBP1-203ENST00000535916 RAB6BQ9NRW1 208 aa11□□□□□ -0.65
VBP1-203ENST00000535916 WHAMMQ8TF30 809 aa10.99□□□□□ -0.65
VBP1-203ENST00000535916 GRIP2Q9C0E4 1043 aa10.99□□□□□ -0.65
VBP1-203ENST00000535916 SLURP2P0DP57 97 aa10.98□□□□□ -0.65
VBP1-203ENST00000535916 GAS6Q14393 721 aa10.98□□□□□ -0.65
VBP1-203ENST00000535916 ZNF837Q96EG3 531 aaPredicted RBP10.98□□□□□ -0.65
VBP1-203ENST00000535916 RIPOR1Q6ZS17 1223 aa10.97□□□□□ -0.65
VBP1-203ENST00000535916 SVOPQ8N4V2 548 aa10.97□□□□□ -0.65
VBP1-203ENST00000535916 PRM3Q9NNZ6 103 aa10.97□□□□□ -0.65
VBP1-203ENST00000535916 NBPF10Q6P3W6 841 aaKnown RBP10.96□□□□□ -0.65
VBP1-203ENST00000535916 TRIM22Q8IYM9 498 aa10.96□□□□□ -0.65
VBP1-203ENST00000535916 NBPF15Q8N660 670 aa10.96□□□□□ -0.65
VBP1-203ENST00000535916 ADAMTS8Q9UP79 889 aa10.96□□□□□ -0.65
VBP1-203ENST00000535916 DYRK1BQ9Y463 629 aa10.96□□□□□ -0.65
VBP1-203ENST00000535916 MYCP01106 439 aaPredicted RBP10.95□□□□□ -0.66
VBP1-203ENST00000535916 IL2RAP01589 272 aa10.95□□□□□ -0.66
VBP1-203ENST00000535916 PRKCSHP14314 528 aaPredicted RBP10.95□□□□□ -0.66
VBP1-203ENST00000535916 EIF4G2P78344 907 aaKnown RBP eCLIP10.95□□□□□ -0.66
VBP1-203ENST00000535916 DBN1Q16643 649 aa10.95□□□□□ -0.66
VBP1-203ENST00000535916 TSGA10IPQ3SY00 556 aa10.95□□□□□ -0.66
VBP1-203ENST00000535916 TMEM151AQ8N4L1 468 aa10.95□□□□□ -0.66
VBP1-203ENST00000535916 GAS2L1Q99501 681 aaPredicted RBP10.95□□□□□ -0.66
VBP1-203ENST00000535916 GDPD2Q9HCC8 539 aa10.95□□□□□ -0.66
VBP1-203ENST00000535916 SPATA31C2B4DYI2 1134 aa10.94□□□□□ -0.66
VBP1-203ENST00000535916 ADAMTS2O95450 1211 aa10.94□□□□□ -0.66
VBP1-203ENST00000535916 GNRH1P01148 92 aa10.94□□□□□ -0.66
VBP1-203ENST00000535916 VAC14Q08AM6 782 aa10.94□□□□□ -0.66
VBP1-203ENST00000535916 CNKSR1Q969H4 720 aa10.94□□□□□ -0.66
VBP1-203ENST00000535916 GPR25O00155 361 aa10.93□□□□□ -0.66
VBP1-203ENST00000535916 PHTF2Q8N3S3 785 aa10.93□□□□□ -0.66
VBP1-203ENST00000535916 ESYT1Q9BSJ8 1104 aa10.93□□□□□ -0.66
VBP1-203ENST00000535916 WASLO00401 505 aaPredicted RBP10.92□□□□□ -0.66
VBP1-203ENST00000535916 ABL2P42684 1182 aa10.92□□□□□ -0.66
VBP1-203ENST00000535916 GSK3AP49840 483 aa10.92□□□□□ -0.66
VBP1-203ENST00000535916 GMCL1Q96IK5 515 aa10.92□□□□□ -0.66
VBP1-203ENST00000535916 DOLKQ9UPQ8 538 aa10.92□□□□□ -0.66
VBP1-203ENST00000535916 ARHGEF15O94989 841 aa10.91□□□□□ -0.66
VBP1-203ENST00000535916 CENPCQ03188 943 aa10.91□□□□□ -0.66
VBP1-203ENST00000535916 SLFNL1Q499Z3 407 aa10.91□□□□□ -0.66
VBP1-203ENST00000535916 TAS1R3Q7RTX0 852 aa10.91□□□□□ -0.66
VBP1-203ENST00000535916 RNF135Q8IUD6 432 aa10.91□□□□□ -0.66
VBP1-203ENST00000535916 TIMMDC1Q9NPL8 285 aa10.91□□□□□ -0.66
VBP1-203ENST00000535916 HRH3Q9Y5N1 445 aa10.91□□□□□ -0.66
VBP1-203ENST00000535916 SRSF11Q05519 484 aaKnown RBP10.9□□□□□ -0.66
VBP1-203ENST00000535916 WDR44Q5JSH3 913 aa10.9□□□□□ -0.66
VBP1-203ENST00000535916 LYPD4Q6UWN0 246 aa10.9□□□□□ -0.66
VBP1-203ENST00000535916 GTPBP3Q969Y2 492 aaKnown RBP10.9□□□□□ -0.66
VBP1-203ENST00000535916 GDF11O95390 407 aa10.89□□□□□ -0.67
VBP1-203ENST00000535916 STAU1O95793 577 aaKnown RBP10.89□□□□□ -0.67
VBP1-203ENST00000535916 MCM6Q14566 821 aa10.89□□□□□ -0.67
VBP1-203ENST00000535916 OXLD1Q5BKU9 147 aa10.89□□□□□ -0.67
VBP1-203ENST00000535916 XP32Q5T750 250 aa10.89□□□□□ -0.67
VBP1-203ENST00000535916 XAGE2Q96GT9 111 aa10.89□□□□□ -0.67
VBP1-203ENST00000535916 H7C1W4 665 aa10.88□□□□□ -0.67
VBP1-203ENST00000535916 FOXR1Q6PIV2 292 aa10.88□□□□□ -0.67
VBP1-203ENST00000535916 ZSCAN10Q96SZ4 725 aaPredicted RBP10.88□□□□□ -0.67
VBP1-203ENST00000535916 FHDC1Q9C0D6 1143 aaPredicted RBP10.88□□□□□ -0.67
VBP1-203ENST00000535916 PHKA2P46019 1235 aa10.87□□□□□ -0.67
VBP1-203ENST00000535916 MBIPQ9NS73 344 aa10.87□□□□□ -0.67
VBP1-203ENST00000535916 CHIC2Q9UKJ5 165 aa10.87□□□□□ -0.67
VBP1-203ENST00000535916 F11P03951 625 aa10.86□□□□□ -0.67
VBP1-203ENST00000535916 USP4Q13107 963 aa10.86□□□□□ -0.67
VBP1-203ENST00000535916 NUCKS1Q9H1E3 243 aaKnown RBP10.86□□□□□ -0.67
VBP1-203ENST00000535916 CELA2BP08218 269 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms