RNA–Protein interactions for RNA: ENST00000535147.5

DDB1-204, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,789 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-204ENST00000535147 NCLP19338 710 aaKnown RBP12.67□□□□□ -0.38
DDB1-204ENST00000535147 CEP85Q6P2H3 762 aa12.67□□□□□ -0.38
DDB1-204ENST00000535147 MEIS3Q99687 375 aa12.67□□□□□ -0.38
DDB1-204ENST00000535147 CPS1P31327 1500 aa12.67□□□□□ -0.38
DDB1-204ENST00000535147 ATP10DQ9P241 1426 aa12.66□□□□□ -0.38
DDB1-204ENST00000535147 PTMSP20962 102 aa12.66□□□□□ -0.38
DDB1-204ENST00000535147 NASPP49321 788 aaPredicted RBP12.66□□□□□ -0.38
DDB1-204ENST00000535147 MLECQ14165 292 aa12.66□□□□□ -0.38
DDB1-204ENST00000535147 KLHL40Q2TBA0 621 aa12.66□□□□□ -0.38
DDB1-204ENST00000535147 ZGPATQ8N5A5 531 aaKnown RBP12.66□□□□□ -0.38
DDB1-204ENST00000535147 CHAMP1Q96JM3 812 aa12.66□□□□□ -0.38
DDB1-204ENST00000535147 MSH6P52701 1360 aa12.65□□□□□ -0.38
DDB1-204ENST00000535147 CLEC17AQ6ZS10 378 aa12.65□□□□□ -0.38
DDB1-204ENST00000535147 METP08581 1390 aa12.65□□□□□ -0.38
DDB1-204ENST00000535147 MIS18AQ9NYP9 233 aa12.65□□□□□ -0.38
DDB1-204ENST00000535147 RGS12O14924 1447 aa12.65□□□□□ -0.39
DDB1-204ENST00000535147 AATKQ6ZMQ8 1374 aa12.65□□□□□ -0.39
DDB1-204ENST00000535147 EIF4A2Q14240 407 aaKnown RBP12.64□□□□□ -0.39
DDB1-204ENST00000535147 CAVIN1Q6NZI2 390 aaKnown RBP12.64□□□□□ -0.39
DDB1-204ENST00000535147 CCDC61Q9Y6R9 512 aa12.64□□□□□ -0.39
DDB1-204ENST00000535147 SOX12O15370 315 aa12.64□□□□□ -0.39
DDB1-204ENST00000535147 A2ML1A8K2U0 1454 aa12.64□□□□□ -0.39
DDB1-204ENST00000535147 RTL1A6NKG5 1358 aa12.64□□□□□ -0.39
DDB1-204ENST00000535147 NUTM2FA1L443 756 aa12.64□□□□□ -0.39
DDB1-204ENST00000535147 RPAP2Q8IXW5 612 aaPredicted RBP12.64□□□□□ -0.39
DDB1-204ENST00000535147 CHL1O00533 1208 aa12.63□□□□□ -0.39
DDB1-204ENST00000535147 CYP2E1P05181 493 aaPredicted RBP12.63□□□□□ -0.39
DDB1-204ENST00000535147 LMBRD1Q9NUN5 540 aa12.63□□□□□ -0.39
DDB1-204ENST00000535147 KIF24Q5T7B8 1368 aa12.62□□□□□ -0.39
DDB1-204ENST00000535147 DLC1Q96QB1 1528 aa12.62□□□□□ -0.39
DDB1-204ENST00000535147 F6X3S4 739 aa12.62□□□□□ -0.39
DDB1-204ENST00000535147 SLC4A2P04920 1241 aa12.62□□□□□ -0.39
DDB1-204ENST00000535147 NUCB2P80303 420 aa12.62□□□□□ -0.39
DDB1-204ENST00000535147 FOXD4L5Q5VV16 416 aaPredicted RBP12.62□□□□□ -0.39
DDB1-204ENST00000535147 TSHZ3Q63HK5 1081 aa12.62□□□□□ -0.39
DDB1-204ENST00000535147 SLC4A10Q6U841 1118 aa12.62□□□□□ -0.39
DDB1-204ENST00000535147 FOXD4L4Q8WXT5 416 aaPredicted RBP12.62□□□□□ -0.39
DDB1-204ENST00000535147 PRR36Q9H6K5 1346 aa12.62□□□□□ -0.39
DDB1-204ENST00000535147 CCDC173Q0VFZ6 552 aa12.62□□□□□ -0.39
DDB1-204ENST00000535147 HSP90AB2PQ58FF8 381 aa12.62□□□□□ -0.39
DDB1-204ENST00000535147 REREQ9P2R6 1566 aa12.62□□□□□ -0.39
DDB1-204ENST00000535147 G2E3Q7L622 706 aa12.61□□□□□ -0.39
DDB1-204ENST00000535147 ZDHHC9Q9Y397 364 aa12.61□□□□□ -0.39
DDB1-204ENST00000535147 RIMBP3CA6NJZ7 1639 aa12.61□□□□□ -0.39
DDB1-204ENST00000535147 RIMBP3BA6NNM3 1639 aa12.61□□□□□ -0.39
DDB1-204ENST00000535147 RIMBP3Q9UFD9 1639 aa12.61□□□□□ -0.39
DDB1-204ENST00000535147 PRPF40AO75400 957 aaKnown RBP12.61□□□□□ -0.39
DDB1-204ENST00000535147 ZSCAN23Q3MJ62 389 aa12.61□□□□□ -0.39
DDB1-204ENST00000535147 CASC1Q6TDU7 716 aa12.61□□□□□ -0.39
DDB1-204ENST00000535147 PPP1R9BQ96SB3 815 aa12.61□□□□□ -0.39
DDB1-204ENST00000535147 RBM27Q9P2N5 1060 aaKnown RBP12.61□□□□□ -0.39
DDB1-204ENST00000535147 FOXO3O43524 673 aa12.6□□□□□ -0.39
DDB1-204ENST00000535147 ST18O60284 1047 aa12.6□□□□□ -0.39
DDB1-204ENST00000535147 ANP32BQ92688 251 aaKnown RBP12.59□□□□□ -0.39
DDB1-204ENST00000535147 IBTKQ9P2D0 1353 aaPredicted RBP12.59□□□□□ -0.39
DDB1-204ENST00000535147 GPT2Q8TD30 523 aa12.59□□□□□ -0.39
DDB1-204ENST00000535147 RBSNQ9H1K0 784 aa12.59□□□□□ -0.39
DDB1-204ENST00000535147 EXOC6BQ9Y2D4 811 aa12.59□□□□□ -0.39
DDB1-204ENST00000535147 SETD1AO15047 1707 aaKnown RBP12.59□□□□□ -0.39
DDB1-204ENST00000535147 ERC2O15083 957 aa12.58□□□□□ -0.39
DDB1-204ENST00000535147 REC8O95072 547 aa12.58□□□□□ -0.39
DDB1-204ENST00000535147 PRIM1P49642 420 aaKnown RBP12.58□□□□□ -0.39
DDB1-204ENST00000535147 ZNF445P59923 1031 aa12.58□□□□□ -0.39
DDB1-204ENST00000535147 PTPRCP08575 1304 aa12.58□□□□□ -0.4
DDB1-204ENST00000535147 PDE1AP54750 535 aa12.58□□□□□ -0.4
DDB1-204ENST00000535147 HSP90AA2PQ14568 343 aaPredicted RBP12.58□□□□□ -0.4
DDB1-204ENST00000535147 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.58□□□□□ -0.4
DDB1-204ENST00000535147 NEK4P51957 841 aa12.58□□□□□ -0.4
DDB1-204ENST00000535147 NOL8Q76FK4 1167 aaKnown RBP12.58□□□□□ -0.4
DDB1-204ENST00000535147 ZSCAN30Q86W11 494 aa12.58□□□□□ -0.4
DDB1-204ENST00000535147 CWC22Q9HCG8 908 aaKnown RBP12.58□□□□□ -0.4
DDB1-204ENST00000535147 NSFL1CQ9UNZ2 370 aaKnown RBP12.58□□□□□ -0.4
DDB1-204ENST00000535147 TTC21BQ7Z4L5 1316 aa12.57□□□□□ -0.4
DDB1-204ENST00000535147 KIAA0232Q92628 1395 aa12.57□□□□□ -0.4
DDB1-204ENST00000535147 HMMRO75330 724 aa12.56□□□□□ -0.4
DDB1-204ENST00000535147 TMEM132AQ24JP5 1023 aa12.56□□□□□ -0.4
DDB1-204ENST00000535147 NECTIN2Q92692 538 aa12.56□□□□□ -0.4
DDB1-204ENST00000535147 DNAJC5Q9H3Z4 198 aa12.56□□□□□ -0.4
DDB1-204ENST00000535147 TMEM63CQ9P1W3 806 aa12.56□□□□□ -0.4
DDB1-204ENST00000535147 TSPYL4Q9UJ04 414 aa12.56□□□□□ -0.4
DDB1-204ENST00000535147 ACEP12821 1306 aa12.56□□□□□ -0.4
DDB1-204ENST00000535147 FAM69CQ0P6D2 419 aa12.55□□□□□ -0.4
DDB1-204ENST00000535147 CYB5RLQ6IPT4 315 aa12.55□□□□□ -0.4
DDB1-204ENST00000535147 KIAA1211Q6ZU35 1233 aa12.55□□□□□ -0.4
DDB1-204ENST00000535147 TMX3Q96JJ7 454 aa12.55□□□□□ -0.4
DDB1-204ENST00000535147 PALD1Q9ULE6 856 aa12.55□□□□□ -0.4
DDB1-204ENST00000535147 CRB1P82279 1406 aa12.55□□□□□ -0.4
DDB1-204ENST00000535147 NRXN3Q9Y4C0 1643 aa12.55□□□□□ -0.4
DDB1-204ENST00000535147 MSNP26038 577 aaKnown RBP12.55□□□□□ -0.4
DDB1-204ENST00000535147 MTHFSDQ2M296 383 aaKnown RBP12.55□□□□□ -0.4
DDB1-204ENST00000535147 MAP3K19Q56UN5 1328 aa12.55□□□□□ -0.4
DDB1-204ENST00000535147 C3P01024 1663 aa12.55□□□□□ -0.4
DDB1-204ENST00000535147 MON2Q7Z3U7 1717 aa12.54□□□□□ -0.4
DDB1-204ENST00000535147 SYCE3A1L190 88 aa12.54□□□□□ -0.4
DDB1-204ENST00000535147 FOXD4L6Q3SYB3 417 aaPredicted RBP12.54□□□□□ -0.4
DDB1-204ENST00000535147 FOXD4L3Q6VB84 417 aaPredicted RBP12.54□□□□□ -0.4
DDB1-204ENST00000535147 ROBO2Q9HCK4 1378 aa12.53□□□□□ -0.4
DDB1-204ENST00000535147 PNMA6EA0A0J9YXQ4 647 aa12.53□□□□□ -0.4
DDB1-204ENST00000535147 RILPL2Q969X0 211 aa12.53□□□□□ -0.4
DDB1-204ENST00000535147 OSBPL3Q9H4L5 887 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms