RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 ITGA6P23229 1130 aa9.32□□□□□ -0.92
TNFRSF1A-206ENST00000535038 ADD1P35611 737 aaKnown RBP9.32□□□□□ -0.92
TNFRSF1A-206ENST00000535038 TRIM52Q96A61 297 aa9.32□□□□□ -0.92
TNFRSF1A-206ENST00000535038 COL25A1Q9BXS0 654 aaPredicted RBP9.32□□□□□ -0.92
TNFRSF1A-206ENST00000535038 WRNQ14191 1432 aaPredicted RBP eCLIP9.31□□□□□ -0.92
TNFRSF1A-206ENST00000535038 PTGIRP43119 386 aa9.31□□□□□ -0.92
TNFRSF1A-206ENST00000535038 IL27Q8NEV9 243 aa9.31□□□□□ -0.92
TNFRSF1A-206ENST00000535038 CDC14CA4D256 554 aa9.3□□□□□ -0.92
TNFRSF1A-206ENST00000535038 FOXD4L5Q5VV16 416 aaPredicted RBP9.3□□□□□ -0.92
TNFRSF1A-206ENST00000535038 FAM9AQ8IZU1 332 aaPredicted RBP9.3□□□□□ -0.92
TNFRSF1A-206ENST00000535038 CYLDQ9NQC7 956 aa9.3□□□□□ -0.92
TNFRSF1A-206ENST00000535038 PCDHB9Q9Y5E1 797 aa9.3□□□□□ -0.92
TNFRSF1A-206ENST00000535038 SV2AQ7L0J3 742 aa9.29□□□□□ -0.92
TNFRSF1A-206ENST00000535038 VWA5B2Q8N398 1253 aa9.29□□□□□ -0.92
TNFRSF1A-206ENST00000535038 KDF1Q8NAX2 398 aaPredicted RBP9.29□□□□□ -0.92
TNFRSF1A-206ENST00000535038 GJD4Q96KN9 370 aaPredicted RBP9.29□□□□□ -0.92
TNFRSF1A-206ENST00000535038 FBXO45P0C2W1 286 aa9.28□□□□□ -0.92
TNFRSF1A-206ENST00000535038 SENP3-EIF4A1A0A087X0R7 540 aa9.27□□□□□ -0.93
TNFRSF1A-206ENST00000535038 GIGYF1O75420 1035 aaPredicted RBP9.27□□□□□ -0.93
TNFRSF1A-206ENST00000535038 RNFT1Q5M7Z0 435 aa9.27□□□□□ -0.93
TNFRSF1A-206ENST00000535038 LYSMD3Q7Z3D4 306 aa9.27□□□□□ -0.93
TNFRSF1A-206ENST00000535038 SOGA1O94964 1423 aa9.27□□□□□ -0.93
TNFRSF1A-206ENST00000535038 TNIKQ9UKE5 1360 aa9.26□□□□□ -0.93
TNFRSF1A-206ENST00000535038 SYNJ1O43426 1573 aa9.26□□□□□ -0.93
TNFRSF1A-206ENST00000535038 ATP5J2-PTCD1G3V325 749 aa9.25□□□□□ -0.93
TNFRSF1A-206ENST00000535038 PPARGC1BQ86YN6 1023 aaKnown RBP9.25□□□□□ -0.93
TNFRSF1A-206ENST00000535038 BAZ1BQ9UIG0 1483 aaKnown RBP9.25□□□□□ -0.93
TNFRSF1A-206ENST00000535038 KCNMA1Q12791 1236 aa9.24□□□□□ -0.93
TNFRSF1A-206ENST00000535038 CCDC125Q86Z20 511 aa9.24□□□□□ -0.93
TNFRSF1A-206ENST00000535038 SVOPQ8N4V2 548 aa9.24□□□□□ -0.93
TNFRSF1A-206ENST00000535038 HMGXB3Q12766 1538 aa9.24□□□□□ -0.93
TNFRSF1A-206ENST00000535038 RUSC2Q8N2Y8 1516 aa9.24□□□□□ -0.93
TNFRSF1A-206ENST00000535038 KIF21BO75037 1637 aa9.23□□□□□ -0.93
TNFRSF1A-206ENST00000535038 RNF144AP50876 292 aaPredicted RBP9.23□□□□□ -0.93
TNFRSF1A-206ENST00000535038 RNF20Q5VTR2 975 aa9.23□□□□□ -0.93
TNFRSF1A-206ENST00000535038 PRICKLE2Q7Z3G6 844 aa9.23□□□□□ -0.93
TNFRSF1A-206ENST00000535038 BRPF1P55201 1214 aaPredicted RBP9.22□□□□□ -0.93
TNFRSF1A-206ENST00000535038 NR1H3Q13133 447 aa9.22□□□□□ -0.93
TNFRSF1A-206ENST00000535038 ZNF385CQ66K41 422 aaPredicted RBP9.22□□□□□ -0.93
TNFRSF1A-206ENST00000535038 ZNF592Q92610 1267 aa9.22□□□□□ -0.93
TNFRSF1A-206ENST00000535038 ADAMTS8Q9UP79 889 aa9.22□□□□□ -0.93
TNFRSF1A-206ENST00000535038 CEP162Q5TB80 1403 aa9.22□□□□□ -0.93
TNFRSF1A-206ENST00000535038 NCAPD3P42695 1498 aa9.21□□□□□ -0.93
TNFRSF1A-206ENST00000535038 MEN1O00255 615 aa9.21□□□□□ -0.94
TNFRSF1A-206ENST00000535038 SLURP2P0DP57 97 aa9.21□□□□□ -0.94
TNFRSF1A-206ENST00000535038 RHOQP17081 205 aa9.21□□□□□ -0.94
TNFRSF1A-206ENST00000535038 ZEB1P37275 1124 aaPredicted RBP9.21□□□□□ -0.94
TNFRSF1A-206ENST00000535038 MCCD1P59942 119 aaPredicted RBP9.21□□□□□ -0.94
TNFRSF1A-206ENST00000535038 ERVK-9P63128 1117 aa9.21□□□□□ -0.94
TNFRSF1A-206ENST00000535038 CC2D2BQ6DHV5 1058 aa9.21□□□□□ -0.94
TNFRSF1A-206ENST00000535038 BANK1Q8NDB2 785 aa9.21□□□□□ -0.94
TNFRSF1A-206ENST00000535038 ZNF330Q9Y3S2 320 aaPredicted RBP9.21□□□□□ -0.94
TNFRSF1A-206ENST00000535038 BIVM-ERCC5R4GMW8 1640 aa9.2□□□□□ -0.94
TNFRSF1A-206ENST00000535038 RNF225M0QZC1 329 aaPredicted RBP9.2□□□□□ -0.94
TNFRSF1A-206ENST00000535038 GPC1P35052 558 aa9.2□□□□□ -0.94
TNFRSF1A-206ENST00000535038 CUEDC1Q9NWM3 386 aaPredicted RBP9.2□□□□□ -0.94
TNFRSF1A-206ENST00000535038 GOLGA3Q08378 1498 aa9.2□□□□□ -0.94
TNFRSF1A-206ENST00000535038 TOP2BQ02880 1626 aa9.2□□□□□ -0.94
TNFRSF1A-206ENST00000535038 A0A1W2PRU2 124 aa9.19□□□□□ -0.94
TNFRSF1A-206ENST00000535038 SOCS7O14512 581 aa9.19□□□□□ -0.94
TNFRSF1A-206ENST00000535038 WHAMMQ8TF30 809 aa9.19□□□□□ -0.94
TNFRSF1A-206ENST00000535038 NDUFB9Q9Y6M9 179 aa9.19□□□□□ -0.94
TNFRSF1A-206ENST00000535038 APBB1O00213 710 aa9.18□□□□□ -0.94
TNFRSF1A-206ENST00000535038 GSK3AP49840 483 aa9.18□□□□□ -0.94
TNFRSF1A-206ENST00000535038 CYP2U1Q7Z449 544 aa9.18□□□□□ -0.94
TNFRSF1A-206ENST00000535038 MTMR14Q8NCE2 650 aa9.18□□□□□ -0.94
TNFRSF1A-206ENST00000535038 ADAMTS2O95450 1211 aa9.17□□□□□ -0.94
TNFRSF1A-206ENST00000535038 NLRP3Q96P20 1036 aa9.17□□□□□ -0.94
TNFRSF1A-206ENST00000535038 PCDHB11Q9Y5F2 797 aa9.17□□□□□ -0.94
TNFRSF1A-206ENST00000535038 CEP164Q9UPV0 1460 aa9.16□□□□□ -0.94
TNFRSF1A-206ENST00000535038 GPR37L1O60883 481 aa9.16□□□□□ -0.94
TNFRSF1A-206ENST00000535038 SCTRP47872 440 aa9.16□□□□□ -0.94
TNFRSF1A-206ENST00000535038 SRSF11Q05519 484 aaKnown RBP9.16□□□□□ -0.94
TNFRSF1A-206ENST00000535038 SLC27A3Q5K4L6 730 aa9.16□□□□□ -0.94
TNFRSF1A-206ENST00000535038 GMCL1Q96IK5 515 aa9.16□□□□□ -0.94
TNFRSF1A-206ENST00000535038 ESF1Q9H501 851 aaKnown RBP9.16□□□□□ -0.94
TNFRSF1A-206ENST00000535038 RASSF7Q02833 373 aa9.15□□□□□ -0.94
TNFRSF1A-206ENST00000535038 GAS6Q14393 721 aa9.15□□□□□ -0.94
TNFRSF1A-206ENST00000535038 RIPOR1Q6ZS17 1223 aa9.15□□□□□ -0.94
TNFRSF1A-206ENST00000535038 TRIM22Q8IYM9 498 aa9.15□□□□□ -0.94
TNFRSF1A-206ENST00000535038 TMEM151AQ8N4L1 468 aa9.15□□□□□ -0.94
TNFRSF1A-206ENST00000535038 ZNF837Q96EG3 531 aaPredicted RBP9.15□□□□□ -0.94
TNFRSF1A-206ENST00000535038 ARHGEF15O94989 841 aa9.14□□□□□ -0.95
TNFRSF1A-206ENST00000535038 GDF11O95390 407 aa9.14□□□□□ -0.95
TNFRSF1A-206ENST00000535038 CLN3Q13286 438 aa9.14□□□□□ -0.95
TNFRSF1A-206ENST00000535038 FOXR1Q6PIV2 292 aa9.14□□□□□ -0.95
TNFRSF1A-206ENST00000535038 KCTD17Q8N5Z5 321 aa9.14□□□□□ -0.95
TNFRSF1A-206ENST00000535038 SNRKQ9NRH2 765 aa9.14□□□□□ -0.95
TNFRSF1A-206ENST00000535038 DYRK1BQ9Y463 629 aa9.14□□□□□ -0.95
TNFRSF1A-206ENST00000535038 TRAK2O60296 914 aa9.13□□□□□ -0.95
TNFRSF1A-206ENST00000535038 POU4F2Q12837 409 aa9.13□□□□□ -0.95
TNFRSF1A-206ENST00000535038 OSBPL3Q9H4L5 887 aa9.13□□□□□ -0.95
TNFRSF1A-206ENST00000535038 ARHGEF10LQ9HCE6 1279 aa9.13□□□□□ -0.95
TNFRSF1A-206ENST00000535038 PRDM2Q13029 1718 aa9.12□□□□□ -0.95
TNFRSF1A-206ENST00000535038 H7C1W4 665 aa9.12□□□□□ -0.95
TNFRSF1A-206ENST00000535038 MARSP56192 900 aaKnown RBP9.12□□□□□ -0.95
TNFRSF1A-206ENST00000535038 MAP3K10Q02779 954 aa9.12□□□□□ -0.95
TNFRSF1A-206ENST00000535038 LYPD4Q6UWN0 246 aa9.12□□□□□ -0.95
TNFRSF1A-206ENST00000535038 GAS2L1Q99501 681 aaPredicted RBP9.12□□□□□ -0.95
TNFRSF1A-206ENST00000535038 GRIP2Q9C0E4 1043 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms